BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os08g0169800 Os08g0169800|AK100074
         (271 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G14310.1  | chr1:4885049-4886672 FORWARD LENGTH=255            307   4e-84
AT2G41250.1  | chr2:17200862-17202551 REVERSE LENGTH=291          166   9e-42
AT1G56500.1  | chr1:21159775-21167092 FORWARD LENGTH=1056          51   8e-07

>AT1G14310.1 | chr1:4885049-4886672 FORWARD LENGTH=255
          Length = 254

 Score =  307 bits (786), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 138/195 (70%), Positives = 170/195 (87%)

Query: 73  ARPVAQTYASLGRRYGMSKSEESIKEGFKRAFSAPWPKTLRYQGDGRPFWRIVVAEATEC 132
           ++PV +TYASLG++YG+  +   IKEGFKR FSAPWP+ LRYQGDGRPFW++VV+EAT C
Sbjct: 57  SKPVHETYASLGQKYGLKTTPAEIKEGFKRVFSAPWPEKLRYQGDGRPFWKLVVSEATGC 116

Query: 133 TNNDYFEEVYEYYAHGDAWRLPAGAYETLRDLKDAGVKLAVVSNFDTRLRKLLKDLHVSD 192
           ++NDYFE+VY+YYA+G+AW LP GAYET+  LKDAGVK+AVVSNFDTRLRKLLKDL+V D
Sbjct: 117 SDNDYFEDVYQYYANGEAWHLPEGAYETMSLLKDAGVKMAVVSNFDTRLRKLLKDLNVID 176

Query: 193 MFDAIVVSSEVGHEKPAPEIFKRALDQIGVEASKAVHVGDDETADKAGANAIGLECWLWG 252
           MFDA++VS+EVG+EKP   IFK AL+QI V+ ++AVHVGDDE ADK GANAIG+ CWLWG
Sbjct: 177 MFDAVIVSAEVGYEKPDERIFKSALEQISVDVNRAVHVGDDEGADKGGANAIGIACWLWG 236

Query: 253 QDVRTFSEIQDRILT 267
           +DV+TFS+IQ RIL 
Sbjct: 237 EDVQTFSDIQKRILV 251



>AT2G41250.1 | chr2:17200862-17202551 REVERSE LENGTH=291
          Length = 290

 Score =  166 bits (421), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 89/195 (45%), Positives = 124/195 (63%), Gaps = 2/195 (1%)

Query: 73  ARPVAQTYASLGRRYGMSKSEESIKEGFKRAFSAPWPKT-LRYQGDGRPFWRIVVAEATE 131
           A+P AQ Y ++G +YG+  SE  I   ++RA+  PW  + LRY  D RPFW+ +V  +T 
Sbjct: 92  AQPTAQIYKNIGEKYGVEYSEAEILTRYRRAYQKPWGGSHLRYVNDARPFWQYIVTASTG 151

Query: 132 CTNNDYFEEVYEYYAHGDAWRL-PAGAYETLRDLKDAGVKLAVVSNFDTRLRKLLKDLHV 190
           C+++ YFEE+Y Y+    AW+L    A +  + +K+AGVK+A+VSNFDTRLR LL+ L  
Sbjct: 152 CSDSQYFEELYSYFTTEQAWKLCDPDAGKVFKAIKEAGVKVAIVSNFDTRLRPLLRALRC 211

Query: 191 SDMFDAIVVSSEVGHEKPAPEIFKRALDQIGVEASKAVHVGDDETADKAGANAIGLECWL 250
            D FDA+ VS+EV  EKP P IF +A + + V    AVHVGDD   D  GA   G + WL
Sbjct: 212 EDWFDAVAVSAEVEAEKPNPTIFLKACELLEVNPEDAVHVGDDRRNDVWGARDAGCDAWL 271

Query: 251 WGQDVRTFSEIQDRI 265
           WG +V +F ++  RI
Sbjct: 272 WGSEVTSFKQVAQRI 286



>AT1G56500.1 | chr1:21159775-21167092 FORWARD LENGTH=1056
          Length = 1055

 Score = 50.8 bits (120), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 39/114 (34%), Positives = 60/114 (52%), Gaps = 3/114 (2%)

Query: 137 YFEEVYEYYAHGDAWRLPAGAYETLRDLKDAGVKLAVVSNFD-TRLRKLLKDLHVS-DMF 194
           +FE   + YA  ++     GA E + + K+ G+K+AV S+ D  ++   LK   +S  MF
Sbjct: 145 FFEIYLDKYAKPESGIGFPGALELVTECKNKGLKVAVASSADRIKVDANLKAAGLSLTMF 204

Query: 195 DAIVVSSEVGHEKPAPEIFKRALDQIGVEASKAVHVGDDETADKAGANAIGLEC 248
           DAIV +    + KPAP+IF  A   +GV  S+ V + +D  A    A A  + C
Sbjct: 205 DAIVSADAFENLKPAPDIFLAAAKILGVPTSECVVI-EDALAGVQAAQAANMRC 257



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.319    0.134    0.407 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 4,702,418
Number of extensions: 184718
Number of successful extensions: 472
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 473
Number of HSP's successfully gapped: 3
Length of query: 271
Length of database: 11,106,569
Length adjustment: 97
Effective length of query: 174
Effective length of database: 8,447,217
Effective search space: 1469815758
Effective search space used: 1469815758
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 111 (47.4 bits)