Os08g0162000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Nonaspanin (TM9SF) family protein.
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Os08g0162000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Nonaspanin (TM9SF) family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 23.5 | 0.228 | 10.3 | 1.12 | 0.853 | 0.0761 | -0.334 | 2.17 | 0.138 | 6.54 | 30.04 | 2678 | -- | -- |
| 23.88 | 0.228 | 10.4 | 0.714 | 0.881 | 0.318 | -0.312 | -- | 0.0921 | 6.45 | 29.9 | 5683 | -- | -- |
| 23.64 | 0.226 | 10.3 | 1.12 | 0.894 | 0.0978 | -- | 2.75 | 0.141 | 6.52 | 30.1 | 2103 | -- | -- |
| 24.06 | 0.228 | 10.4 | 0.702 | 0.849 | 0.313 | -- | -- | 0.0992 | 6.47 | 29.9 | 5688 | -- | -- |
| 61.21 | 0.364 | 10.3 | 1.42 | -- | -0.049 | -- | 3.37 | 0.188 | -- | 29.8 | 2766 | -- | -- |
| 28.42 | 0.25 | 10.4 | 0.803 | 0.869 | -- | -0.313 | -- | 0.0655 | 6.39 | -- | -- | -- | -- |
| 28.66 | 0.251 | 10.4 | 0.799 | 0.867 | -- | -- | -- | 0.0666 | 6.41 | -- | -- | -- | -- |
| 61.33 | 0.365 | 10.4 | 0.698 | -- | 0.331 | -- | -- | 0.0998 | -- | 29.8 | 5688 | -- | -- |
| 36.29 | 0.281 | 10.4 | -- | 0.852 | 0.414 | -- | -- | 0.00888 | 6.46 | 29.5 | 5696 | -- | -- |
| 67.76 | 0.385 | 10.4 | 0.821 | -- | -- | -- | -- | 0.0849 | -- | -- | -- | -- | -- |
| 45.49 | 0.316 | 10.4 | -- | 0.878 | -- | -- | -- | -0.0224 | 6.36 | -- | -- | -- | -- |
| 73.56 | 0.399 | 10.4 | -- | -- | 0.475 | -- | -- | 0.0561 | -- | 29.89 | 5708 | -- | -- |
| 85.56 | 0.432 | 10.4 | -- | -- | -- | -- | -- | -0.0062 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 23.28 | temperature | 10 | 270 | > th | dose dependent | rect. | 2 | 20 |
| 2 | 23.33 | humidity | 60 | 14400 | < th | dose dependent | rect. | 16 | 17 |
| 3 | 23.35 | temperature | 30 | 720 | < th | dose independent | rect. | 15 | 3 |
| 4 | 23.36 | humidity | 60 | 14400 | < th | dose dependent | rect. | 16 | 3 |
| 20 | 23.53 | humidity | 60 | 14400 | < th | dose independent | rect. | 17 | 2 |
| 23 | 23.55 | humidity | 60 | 14400 | < th | dose independent | rect. | 17 | 15 |
| 36 | 23.56 | humidity | 50 | 14400 | < th | dose independent | rect. | 16 | 19 |
| 37 | 23.59 | humidity | 60 | 14400 | > th | dose independent | rect. | 17 | 12 |
| 39 | 23.60 | humidity | 60 | 14400 | > th | dose independent | rect. | 17 | 2 |
| 42 | 23.60 | humidity | 60 | 14400 | > th | dose independent | rect. | 17 | 10 |
| 47 | 23.61 | temperature | 30 | 1440 | > th | dose independent | rect. | 10 | 7 |
| 48 | 23.61 | humidity | 60 | 14400 | > th | dose independent | rect. | 17 | 8 |
| 50 | 23.62 | temperature | 30 | 1440 | > th | dose independent | rect. | 10 | 5 |
| 53 | 23.64 | temperature | 30 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 65 | 23.64 | humidity | 50 | 14400 | > th | dose independent | rect. | 16 | 18 |
| 75 | 23.67 | temperature | 30 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 81 | 23.67 | humidity | 50 | 14400 | < th | dose independent | rect. | 17 | 17 |
| 118 | 23.69 | temperature | 30 | 1440 | > th | dose independent | sin | 1 | NA |
| 141 | 23.70 | temperature | 30 | 1440 | < th | dose independent | rect. | 10 | 7 |
| 160 | 23.71 | humidity | 70 | 4320 | > th | dose independent | rect. | 19 | 1 |
| 165 | 23.72 | temperature | 30 | 1440 | < th | dose independent | sin | 2 | NA |
| 203 | 23.73 | temperature | 30 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 225 | 23.75 | temperature | 30 | 1440 | > th | dose independent | no | NA | NA |
| 342 | 23.75 | humidity | 70 | 14400 | < th | dose dependent | rect. | 18 | 14 |
| 344 | 23.75 | humidity | 50 | 14400 | < th | dose dependent | rect. | 16 | 19 |
| 362 | 23.76 | temperature | 30 | 1440 | > th | dose independent | rect. | 14 | 23 |
| 375 | 23.77 | temperature | 30 | 1440 | < th | dose independent | rect. | 14 | 23 |
| 386 | 23.78 | humidity | 70 | 4320 | > th | dose independent | rect. | 19 | 11 |
| 401 | 23.79 | temperature | 30 | 1440 | < th | dose independent | no | NA | NA |
| 436 | 23.79 | radiation | 20 | 4320 | > th | dose independent | rect. | 16 | 16 |
| 584 | 23.83 | temperature | 30 | 720 | < th | dose independent | rect. | 15 | 12 |
| 637 | 23.85 | temperature | 30 | 1440 | > th | dose dependent | rect. | 12 | 1 |
| 722 | 23.88 | temperature | 10 | 720 | > th | dose dependent | rect. | 10 | 5 |
| 724 | 23.89 | temperature | 25 | 4320 | > th | dose independent | rect. | 7 | 1 |
| 773 | 23.93 | temperature | 25 | 4320 | > th | dose dependent | rect. | 7 | 3 |
| 774 | 23.93 | temperature | 15 | 10 | > th | dose dependent | rect. | 4 | 20 |
| 776 | 23.94 | temperature | 25 | 4320 | < th | dose independent | rect. | 7 | 1 |
| 780 | 23.94 | temperature | 30 | 4320 | < th | dose independent | rect. | 13 | 4 |
| 783 | 23.94 | temperature | 25 | 4320 | > th | dose dependent | rect. | 8 | 1 |