Os08g0154200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os08g0154200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 110.06 | 0.493 | 6.88 | 0.498 | 1.61 | 1.33 | -0.0928 | 2.75 | 0.323 | 6.94 | 6.39 | 5416 | -- | -- |
| 109.71 | 0.488 | 6.95 | 0.148 | 1.61 | 0.895 | 0.0685 | -- | 0.342 | 6.9 | 25.8 | 5607 | -- | -- |
| 110.08 | 0.489 | 6.88 | 0.496 | 1.61 | 1.33 | -- | 2.75 | 0.323 | 6.93 | 6.23 | 5413 | -- | -- |
| 109.59 | 0.488 | 6.94 | 0.136 | 1.59 | 0.889 | -- | -- | 0.339 | 6.92 | 25.93 | 5579 | -- | -- |
| 243.12 | 0.726 | 6.92 | 0.485 | -- | 1.42 | -- | 2.75 | 0.325 | -- | 9.225 | 5668 | -- | -- |
| 139.14 | 0.553 | 6.93 | 0.455 | 1.62 | -- | -0.0167 | -- | 0.398 | 6.74 | -- | -- | -- | -- |
| 139.14 | 0.552 | 6.93 | 0.455 | 1.62 | -- | -- | -- | 0.398 | 6.74 | -- | -- | -- | -- |
| 240.12 | 0.722 | 6.97 | 0.193 | -- | 0.886 | -- | -- | 0.409 | -- | 27.6 | 5679 | -- | -- |
| 110.02 | 0.489 | 6.95 | -- | 1.59 | 0.927 | -- | -- | 0.315 | 6.92 | 25.7 | 5579 | -- | -- |
| 275.96 | 0.776 | 6.96 | 0.492 | -- | -- | -- | -- | 0.43 | -- | -- | -- | -- | -- |
| 144.59 | 0.562 | 6.94 | -- | 1.62 | -- | -- | -- | 0.347 | 6.73 | -- | -- | -- | -- |
| 241.02 | 0.723 | 6.97 | -- | -- | 0.924 | -- | -- | 0.394 | -- | 27.45 | 5675 | -- | -- |
| 282.33 | 0.784 | 6.98 | -- | -- | -- | -- | -- | 0.375 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 108.11 | temperature | 20 | 4320 | > th | dose dependent | rect. | 4 | 1 |
| 54 | 110.47 | temperature | 30 | 4320 | < th | dose dependent | rect. | 4 | 1 |
| 71 | 110.66 | temperature | 30 | 4320 | < th | dose dependent | rect. | 2 | 6 |
| 72 | 110.67 | temperature | 30 | 4320 | < th | dose dependent | rect. | 4 | 3 |
| 154 | 110.99 | temperature | 20 | 4320 | > th | dose dependent | sin | 10 | NA |
| 190 | 111.07 | temperature | 10 | 4320 | > th | dose dependent | rect. | 18 | 13 |
| 254 | 111.20 | temperature | 10 | 4320 | > th | dose dependent | sin | 10 | NA |
| 292 | 111.26 | temperature | 25 | 4320 | < th | dose independent | rect. | 7 | 3 |
| 323 | 111.31 | temperature | 30 | 4320 | < th | dose dependent | sin | 10 | NA |
| 495 | 111.63 | temperature | 30 | 4320 | > th | dose independent | rect. | 15 | 2 |
| 496 | 111.63 | temperature | 30 | 4320 | < th | dose independent | rect. | 15 | 2 |
| 501 | 111.64 | temperature | 30 | 4320 | < th | dose independent | rect. | 15 | 14 |
| 513 | 111.65 | temperature | 30 | 4320 | < th | dose independent | rect. | 15 | 16 |
| 523 | 111.67 | temperature | 25 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 537 | 111.70 | temperature | 30 | 4320 | < th | dose independent | rect. | 15 | 4 |
| 554 | 111.72 | temperature | 30 | 4320 | < th | dose independent | rect. | 15 | 10 |
| 563 | 111.73 | temperature | 25 | 4320 | > th | dose independent | rect. | 7 | 3 |
| 622 | 111.82 | temperature | 30 | 4320 | < th | dose independent | sin | 14 | NA |
| 626 | 111.83 | temperature | 30 | 4320 | > th | dose independent | rect. | 15 | 4 |
| 657 | 111.85 | temperature | 25 | 720 | > th | dose dependent | rect. | 18 | 14 |
| 815 | 112.07 | temperature | 30 | 4320 | > th | dose independent | sin | 14 | NA |
| 999 | 112.26 | temperature | 25 | 1440 | > th | dose dependent | rect. | 16 | 5 |