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Os08g0141400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to External rotenone-insensitive NADPH dehydrogenase.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 7.74 (0.0379) R2 : 0.418
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.671 (0.0963) R2dC : 0.0545 R2C : 0.0375
β3 : 1.67 (0.124) R2dE : 0.276 R2E : 0.327
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.342 (0.0864) R2dN8 : 0.0323 R2N8 : 0.0802
σ : 0.694
deviance : 222.19
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C
peak time of C : 4.99
E
wheather : radiation
threshold : 0.6695
memory length : 26016
response mode : > th
dose dependency : dose independent
G
type of G : no
peak or start time of G : --
open length of G : --

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Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
203.5 0.67 7.71 1.62 0.58 1.66 0.865 2.83 0.685 4.76 1.396 4339 -- --
214.3 0.682 7.75 1.17 0.529 1.31 0.771 -- 0.707 5.11 1.63 4319 -- --
205.45 0.668 7.71 1.62 0.586 1.67 -- 2.84 0.685 4.65 1.398 4340 -- --
214.11 0.682 7.75 1.02 0.586 1.45 -- -- 0.557 4.92 1.68 4337 -- --
221.72 0.694 7.71 1.68 -- 1.62 -- 2.89 0.701 -- 1.507 4319 -- --
263.65 0.761 7.68 1.31 0.619 -- 0.966 -- 0.915 4.9 -- -- -- --
266.03 0.764 7.68 1.3 0.624 -- -- -- 0.91 4.79 -- -- -- --
231.89 0.709 7.74 1.04 -- 1.47 -- -- 0.579 -- 1.64 4316 -- --
222.19 0.694 7.74 -- 0.671 1.67 -- -- 0.342 4.99 0.6695 26016 -- --
286.64 0.791 7.69 1.33 -- -- -- -- 0.926 -- -- -- -- --
310.8 0.825 7.71 -- 0.648 -- -- -- 0.765 4.74 -- -- -- --
240.84 0.723 7.77 -- -- 1.52 -- -- 0.444 -- 0.8122 32977 -- --
333.08 0.852 7.72 -- -- -- -- -- 0.779 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 194.82 radiation 40 1440 > th dose independent rect. 8 1
18 195.18 radiation 1 4320 > th dose independent rect. 18 14
22 196.33 radiation 40 1440 < th dose independent rect. 22 11
23 196.35 radiation 1 4320 < th dose independent rect. 18 14
27 196.95 radiation 40 1440 < th dose independent rect. 24 9
28 196.96 radiation 40 1440 < th dose independent rect. 19 14
30 197.07 radiation 40 1440 < th dose independent rect. 8 1
40 198.57 wind 3 43200 < th dose dependent rect. 3 2
41 198.78 radiation 40 1440 < th dose independent rect. 2 7
42 198.81 radiation 1 4320 > th dose independent rect. 18 1
55 199.18 radiation 1 4320 < th dose independent rect. 18 11
56 199.23 radiation 40 1440 < th dose independent rect. 17 16
57 199.25 wind 3 43200 < th dose independent rect. 3 1
63 199.50 radiation 1 4320 < th dose independent rect. 18 7
66 199.57 radiation 1 4320 < th dose independent rect. 18 2
69 199.65 radiation 1 4320 < th dose independent rect. 18 5
71 199.72 wind 3 43200 > th dose independent rect. 3 1
78 199.96 wind 1 43200 > th dose dependent rect. 3 1
82 200.40 radiation 1 4320 > th dose independent rect. 18 23
83 200.42 radiation 20 4320 < th dose independent rect. 17 15
86 200.51 radiation 20 4320 < th dose independent rect. 22 10
87 200.51 radiation 20 4320 < th dose independent rect. 19 13
88 200.52 radiation 20 4320 < th dose independent rect. 24 8
89 200.55 radiation 20 4320 < th dose independent rect. 2 6
95 200.60 radiation 20 4320 < th dose independent rect. 6 2
106 201.04 wind 3 43200 > th dose dependent rect. 5 1
107 201.10 radiation 1 4320 < th dose independent rect. 18 23
110 201.42 radiation 10 4320 < th dose dependent rect. 18 10
112 201.52 radiation 1 4320 > th dose independent sin 10 NA
121 201.69 radiation 10 4320 < th dose dependent rect. 18 7
126 201.84 wind 1 43200 > th dose dependent rect. 3 4
129 201.92 radiation 1 4320 > th dose independent rect. 5 3
137 202.02 radiation 1 4320 < th dose independent sin 9 NA
138 202.03 radiation 10 4320 < th dose dependent rect. 18 2
143 202.11 wind 9 43200 < th dose dependent rect. 3 4
146 202.14 radiation 40 4320 < th dose dependent rect. 17 15
147 202.15 radiation 1 4320 < th dose independent rect. 5 3
150 202.17 radiation 1 4320 > th dose dependent rect. 17 15
163 202.22 humidity 80 43200 > th dose dependent rect. 10 1
165 202.25 radiation 1 4320 < th dose independent rect. 22 10
168 202.28 radiation 40 4320 > th dose dependent rect. 13 21
180 202.30 radiation 1 4320 < th dose independent rect. 24 8
190 202.35 radiation 1 4320 < th dose independent rect. 2 6
201 202.36 radiation 10 4320 < th dose dependent rect. 18 5
211 202.45 humidity 90 43200 < th dose independent rect. 9 1
227 202.55 radiation 1 4320 < th dose dependent rect. 18 14
240 202.61 humidity 90 43200 > th dose independent rect. 9 1
268 202.84 atmosphere 1005 43200 < th dose independent rect. 18 1
279 202.88 radiation 40 4320 < th dose independent rect. 14 20
287 202.98 atmosphere 1005 43200 > th dose independent rect. 18 2
304 203.20 radiation 40 4320 < th dose dependent rect. 7 1
325 203.40 radiation 1 4320 > th dose dependent rect. 7 1
359 203.72 radiation 30 4320 > th dose dependent rect. 15 18
364 203.82 radiation 40 4320 < th dose independent sin 12 NA
382 203.96 wind 1 43200 > th dose dependent rect. 24 7
385 203.98 wind 9 43200 < th dose dependent rect. 24 7
439 204.50 radiation 40 4320 < th dose dependent rect. 2 6
443 204.53 radiation 40 4320 < th dose dependent rect. 22 10
453 204.58 radiation 1 4320 > th dose dependent rect. 18 12
482 204.70 radiation 1 4320 > th dose dependent rect. 4 4
545 204.94 radiation 40 4320 > th dose dependent sin 12 NA
549 204.95 radiation 1 4320 > th dose independent rect. 16 16
552 204.96 radiation 30 4320 > th dose dependent rect. 7 2
570 204.99 radiation 40 4320 > th dose dependent rect. 13 2
586 205.04 wind 9 43200 < th dose dependent rect. 3 9
664 205.27 humidity 90 14400 > th dose dependent rect. 6 1
668 205.29 humidity 90 14400 > th dose dependent rect. 24 20
692 205.43 wind 1 43200 > th dose dependent rect. 3 9
705 205.57 humidity 90 14400 < th dose independent rect. 23 20
717 205.63 humidity 90 14400 > th dose independent rect. 24 19
721 205.65 humidity 90 14400 < th dose independent rect. 24 18
722 205.65 humidity 90 14400 > th dose independent rect. 23 21
724 205.67 wind 3 43200 > th dose independent rect. 3 6
727 205.68 wind 1 43200 > th dose dependent rect. 24 12
731 205.70 radiation 1 4320 < th dose dependent rect. 2 6
737 205.72 humidity 90 14400 > th dose independent rect. 1 15
742 205.74 radiation 1 4320 < th dose dependent rect. 4 4
749 205.76 humidity 90 14400 > th dose dependent rect. 5 3
756 205.78 humidity 90 14400 > th dose dependent rect. 11 20
778 205.81 radiation 1 4320 < th dose dependent rect. 22 10
787 205.84 radiation 1 4320 > th dose independent rect. 4 13
822 205.92 wind 3 43200 < th dose independent rect. 3 6
824 205.92 temperature 10 14400 > th dose dependent rect. 13 1
834 205.95 radiation 1 4320 < th dose independent rect. 22 19
839 205.97 radiation 1 4320 < th dose independent rect. 24 17
858 206.03 radiation 1 4320 < th dose independent rect. 2 15
863 206.06 radiation 1 4320 < th dose independent rect. 4 13
891 206.15 humidity 90 14400 > th dose independent rect. 11 20
907 206.19 humidity 90 14400 < th dose independent rect. 11 20
1000 206.44 radiation 1 4320 < th dose independent rect. 16 16