Os08g0127700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os08g0127700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 17.65 | 0.197 | 13.7 | -0.0109 | 0.285 | 0.685 | 0.085 | 0.279 | 0.0728 | 3.18 | 10.39 | 587 | -- | -- |
| 17.71 | 0.196 | 13.7 | -0.0443 | 0.283 | 0.682 | 0.0771 | -- | 0.0623 | 3.11 | 10.78 | 584 | -- | -- |
| 17.67 | 0.196 | 13.7 | -0.0137 | 0.281 | 0.684 | -- | 0.274 | 0.0719 | 3.23 | 10.47 | 598 | -- | -- |
| 17.72 | 0.196 | 13.7 | -0.0598 | 0.297 | 0.695 | -- | -- | 0.0591 | 3.2 | 10.84 | 559 | -- | -- |
| 19.7 | 0.207 | 13.7 | -0.0266 | -- | 0.678 | -- | 0.261 | 0.0689 | -- | 9.396 | 979 | -- | -- |
| 23.28 | 0.226 | 13.7 | 0.11 | 0.257 | -- | 0.16 | -- | 0.165 | 0.544 | -- | -- | -- | -- |
| 23.39 | 0.226 | 13.7 | 0.103 | 0.257 | -- | -- | -- | 0.164 | 0.677 | -- | -- | -- | -- |
| 19.76 | 0.207 | 13.7 | -0.0832 | -- | 0.687 | -- | -- | 0.0541 | -- | 9.498 | 980 | -- | -- |
| 17.81 | 0.197 | 13.7 | -- | 0.293 | 0.668 | -- | -- | 0.069 | 3.11 | 10.62 | 554 | -- | -- |
| 27.52 | 0.245 | 13.6 | 0.112 | -- | -- | -- | -- | 0.168 | -- | -- | -- | -- | -- |
| 23.67 | 0.228 | 13.7 | -- | 0.258 | -- | -- | -- | 0.152 | 0.696 | -- | -- | -- | -- |
| 19.92 | 0.208 | 13.7 | -- | -- | 0.654 | -- | -- | 0.068 | -- | 9.448 | 974 | -- | -- |
| 27.85 | 0.246 | 13.7 | -- | -- | -- | -- | -- | 0.156 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 17.23 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 16 |
| 3 | 17.23 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 18 |
| 8 | 17.31 | temperature | 15 | 720 | > th | dose dependent | sin | 10 | NA |
| 15 | 17.35 | temperature | 20 | 4320 | > th | dose dependent | rect. | 19 | 1 |
| 40 | 17.43 | temperature | 30 | 720 | < th | dose dependent | rect. | 17 | 18 |
| 72 | 17.51 | temperature | 20 | 1440 | > th | dose dependent | rect. | 6 | 1 |
| 79 | 17.52 | temperature | 10 | 4320 | > th | dose dependent | rect. | 19 | 2 |
| 80 | 17.52 | temperature | 30 | 4320 | < th | dose dependent | rect. | 19 | 2 |
| 81 | 17.52 | temperature | 20 | 4320 | > th | dose dependent | rect. | 18 | 10 |
| 128 | 17.56 | temperature | 10 | 1440 | > th | dose dependent | rect. | 3 | 6 |
| 140 | 17.57 | temperature | 30 | 1440 | < th | dose dependent | rect. | 3 | 6 |
| 148 | 17.58 | temperature | 20 | 4320 | > th | dose dependent | rect. | 3 | 1 |
| 172 | 17.60 | temperature | 20 | 1440 | > th | dose dependent | rect. | 5 | 3 |
| 187 | 17.61 | temperature | 20 | 4320 | > th | dose dependent | sin | 12 | NA |
| 211 | 17.62 | temperature | 30 | 720 | < th | dose dependent | sin | 9 | NA |
| 275 | 17.64 | temperature | 10 | 720 | > th | dose dependent | rect. | 10 | 23 |
| 394 | 17.69 | temperature | 15 | 720 | > th | dose dependent | rect. | 12 | 23 |
| 421 | 17.70 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 23 |
| 425 | 17.71 | temperature | 30 | 1440 | < th | dose dependent | rect. | 6 | 1 |
| 492 | 17.73 | temperature | 30 | 4320 | < th | dose independent | rect. | 15 | 1 |
| 528 | 17.74 | temperature | 30 | 4320 | > th | dose independent | rect. | 15 | 1 |
| 529 | 17.74 | temperature | 25 | 4320 | < th | dose independent | rect. | 20 | 20 |
| 601 | 17.75 | temperature | 15 | 720 | > th | dose dependent | rect. | 23 | 23 |
| 638 | 17.76 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 21 |
| 643 | 17.77 | temperature | 25 | 4320 | > th | dose independent | rect. | 19 | 21 |
| 646 | 17.77 | temperature | 10 | 720 | > th | dose dependent | no | NA | NA |
| 684 | 17.78 | temperature | 25 | 4320 | < th | dose independent | rect. | 12 | 20 |
| 745 | 17.79 | temperature | 20 | 4320 | > th | dose dependent | no | NA | NA |
| 835 | 17.80 | temperature | 20 | 4320 | > th | dose dependent | rect. | 1 | 23 |
| 838 | 17.80 | temperature | 20 | 4320 | > th | dose dependent | rect. | 23 | 23 |
| 943 | 17.83 | temperature | 25 | 4320 | > th | dose independent | rect. | 12 | 20 |
| 992 | 17.84 | temperature | 25 | 4320 | < th | dose independent | sin | 6 | NA |
| 993 | 17.84 | temperature | 25 | 4320 | < th | dose independent | rect. | 1 | 14 |
| 998 | 17.84 | temperature | 10 | 4320 | > th | dose dependent | sin | 15 | NA |