Os08g0119500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Methyltransferase type 11 domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os08g0119500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Methyltransferase type 11 domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 81.17 | 0.423 | 9.43 | 1.17 | 0.875 | 0.274 | 0.759 | 4.12 | -0.0243 | 23.9 | 8.474 | 5468 | -- | -- |
| 93.24 | 0.45 | 9.57 | 0.162 | 0.948 | 0.205 | 1.12 | -- | -0.3 | 23.8 | 30.9 | 24162 | -- | -- |
| 83.51 | 0.426 | 9.43 | 1.16 | 0.87 | 0.285 | -- | 4.24 | -0.0222 | 23.9 | 8.781 | 5340 | -- | -- |
| 90.82 | 0.444 | 9.58 | 0.155 | 0.899 | 0.473 | -- | -- | -0.195 | 23.9 | 32.18 | 1684 | -- | -- |
| 130.36 | 0.532 | 9.4 | 1.17 | -- | 0.438 | -- | 4.27 | -0.0244 | -- | 14.7 | 5325 | -- | -- |
| 95.46 | 0.458 | 9.58 | 0.297 | 0.896 | -- | 0.88 | -- | -0.262 | 24 | -- | -- | -- | -- |
| 98.82 | 0.466 | 9.58 | 0.262 | 0.893 | -- | -- | -- | -0.266 | 23.9 | -- | -- | -- | -- |
| 125.3 | 0.521 | 9.58 | 0.0626 | -- | 0.881 | -- | -- | -0.331 | -- | 25.1 | 978 | -- | -- |
| 90.88 | 0.444 | 9.56 | -- | 0.826 | 0.446 | -- | -- | -0.192 | 23.8 | 31.1 | 1280 | -- | -- |
| 149.03 | 0.57 | 9.56 | 0.289 | -- | -- | -- | -- | -0.254 | -- | -- | -- | -- | -- |
| 100.63 | 0.469 | 9.59 | -- | 0.896 | -- | -- | -- | -0.295 | 23.9 | -- | -- | -- | -- |
| 125.36 | 0.521 | 9.58 | -- | -- | 0.892 | -- | -- | -0.335 | -- | 25.1 | 969 | -- | -- |
| 151.24 | 0.574 | 9.57 | -- | -- | -- | -- | -- | -0.286 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 76.86 | wind | 7 | 43200 | > th | dose independent | rect. | 18 | 14 |
| 2 | 76.90 | wind | 7 | 43200 | < th | dose independent | rect. | 18 | 14 |
| 4 | 77.02 | wind | 7 | 43200 | > th | dose independent | rect. | 18 | 12 |
| 9 | 77.20 | wind | 5 | 43200 | > th | dose dependent | rect. | 18 | 14 |
| 16 | 77.35 | wind | 7 | 43200 | > th | dose independent | sin | 10 | NA |
| 18 | 77.37 | wind | 7 | 43200 | < th | dose independent | sin | 10 | NA |
| 38 | 77.65 | wind | 5 | 43200 | > th | dose dependent | sin | 10 | NA |
| 166 | 78.93 | wind | 3 | 43200 | > th | dose dependent | rect. | 21 | 6 |
| 169 | 78.94 | wind | 5 | 43200 | < th | dose independent | rect. | 21 | 5 |
| 190 | 79.11 | humidity | 90 | 43200 | > th | dose dependent | rect. | 10 | 1 |
| 193 | 79.12 | wind | 5 | 43200 | > th | dose independent | rect. | 21 | 5 |
| 201 | 79.16 | wind | 7 | 43200 | > th | dose dependent | rect. | 19 | 1 |
| 349 | 79.86 | humidity | 90 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 350 | 79.86 | humidity | 90 | 43200 | > th | dose independent | rect. | 10 | 3 |
| 351 | 79.86 | temperature | 15 | 4320 | > th | dose dependent | rect. | 17 | 2 |
| 370 | 79.92 | temperature | 20 | 4320 | > th | dose dependent | rect. | 10 | 9 |
| 382 | 79.96 | temperature | 15 | 4320 | > th | dose dependent | rect. | 10 | 12 |
| 474 | 80.12 | temperature | 30 | 4320 | < th | dose dependent | rect. | 17 | 2 |
| 504 | 80.15 | wind | 5 | 43200 | > th | dose independent | rect. | 21 | 18 |
| 531 | 80.18 | wind | 5 | 43200 | > th | dose dependent | rect. | 4 | 6 |
| 537 | 80.19 | wind | 5 | 43200 | < th | dose independent | rect. | 21 | 18 |
| 559 | 80.21 | temperature | 15 | 4320 | > th | dose dependent | sin | 20 | NA |
| 593 | 80.25 | wind | 5 | 43200 | > th | dose dependent | rect. | 6 | 2 |
| 806 | 80.51 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 11 |
| 859 | 80.57 | wind | 5 | 43200 | > th | dose independent | rect. | 1 | 9 |
| 919 | 80.63 | wind | 5 | 43200 | < th | dose independent | rect. | 1 | 9 |
| 960 | 80.67 | wind | 5 | 43200 | > th | dose dependent | rect. | 1 | 13 |