Os08g0102800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os08g0102800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 109.35 | 0.491 | 10.3 | 0.595 | 3.1 | 1.53 | -0.448 | -4.27 | 0.385 | 22.5 | 22.57 | 993 | -- | -- |
| 118.36 | 0.507 | 10.2 | 1.64 | 3.07 | 1.34 | -0.927 | -- | 0.601 | 22.6 | 20.9 | 890 | -- | -- |
| 110.03 | 0.489 | 10.4 | 0.54 | 3.09 | 1.57 | -- | -4.67 | 0.373 | 22.5 | 22.82 | 1001 | -- | -- |
| 121.91 | 0.514 | 10.2 | 1.66 | 3.13 | 1.25 | -- | -- | 0.66 | 22.5 | 20.44 | 931 | -- | -- |
| 566.85 | 1.11 | 10.3 | -0.0649 | -- | 3.57 | -- | -6.8 | 0.308 | -- | 24.1 | 858 | -- | -- |
| 156.33 | 0.586 | 10.2 | 2.01 | 3.43 | -- | -0.796 | -- | 0.904 | 22.5 | -- | -- | -- | -- |
| 158.93 | 0.59 | 10.2 | 2.04 | 3.43 | -- | -- | -- | 0.906 | 22.5 | -- | -- | -- | -- |
| 606.1 | 1.15 | 10.2 | 1.32 | -- | 3.09 | -- | -- | 0.551 | -- | 23.9 | 825 | -- | -- |
| 142.01 | 0.555 | 10.3 | -- | 3.4 | 1.81 | -- | -- | 0.136 | 22.5 | 8.135 | 47520 | -- | -- |
| 880.86 | 1.39 | 10.1 | 2.1 | -- | -- | -- | -- | 0.92 | -- | -- | -- | -- | -- |
| 268.81 | 0.767 | 10.2 | -- | 3.44 | -- | -- | -- | 0.678 | 22.5 | -- | -- | -- | -- |
| 646.54 | 1.18 | 10.3 | -- | -- | 4.03 | -- | -- | 0.1 | -- | 16.43 | 794 | -- | -- |
| 997.36 | 1.47 | 10.1 | -- | -- | -- | -- | -- | 0.687 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 107.29 | temperature | 25 | 720 | < th | dose independent | rect. | 4 | 21 |
| 2 | 107.50 | temperature | 20 | 720 | > th | dose dependent | rect. | 14 | 14 |
| 3 | 107.61 | temperature | 20 | 720 | > th | dose dependent | sin | 16 | NA |
| 4 | 107.81 | temperature | 25 | 720 | < th | dose independent | rect. | 8 | 17 |
| 8 | 107.87 | temperature | 20 | 720 | > th | dose dependent | rect. | 12 | 16 |
| 15 | 108.17 | temperature | 25 | 720 | > th | dose independent | rect. | 7 | 19 |
| 43 | 108.77 | temperature | 25 | 720 | < th | dose independent | sin | 19 | NA |
| 68 | 109.48 | temperature | 25 | 720 | > th | dose independent | sin | 19 | NA |
| 85 | 109.78 | temperature | 30 | 270 | < th | dose dependent | rect. | 16 | 7 |
| 108 | 110.04 | temperature | 25 | 720 | < th | dose independent | rect. | 7 | 23 |
| 112 | 110.12 | temperature | 25 | 720 | < th | dose independent | rect. | 12 | 23 |
| 123 | 110.22 | temperature | 25 | 720 | > th | dose independent | rect. | 10 | 23 |
| 137 | 110.38 | temperature | 25 | 720 | < th | dose independent | no | NA | NA |
| 144 | 110.45 | temperature | 25 | 720 | > th | dose independent | rect. | 14 | 23 |
| 159 | 110.55 | temperature | 25 | 720 | > th | dose independent | rect. | 12 | 23 |
| 160 | 110.55 | temperature | 25 | 720 | < th | dose independent | rect. | 22 | 23 |
| 173 | 110.66 | temperature | 25 | 720 | < th | dose independent | rect. | 14 | 23 |
| 180 | 110.69 | temperature | 25 | 720 | > th | dose independent | rect. | 1 | 23 |
| 186 | 110.73 | temperature | 30 | 720 | < th | dose dependent | sin | 17 | NA |
| 210 | 110.89 | temperature | 30 | 720 | < th | dose dependent | rect. | 11 | 15 |
| 221 | 111.01 | temperature | 25 | 720 | > th | dose independent | no | NA | NA |
| 258 | 111.32 | temperature | 25 | 720 | < th | dose independent | rect. | 17 | 23 |
| 282 | 111.48 | temperature | 25 | 720 | > th | dose independent | rect. | 21 | 23 |
| 288 | 111.55 | temperature | 25 | 720 | > th | dose independent | rect. | 23 | 23 |
| 310 | 111.69 | temperature | 30 | 10 | < th | dose dependent | rect. | 19 | 7 |
| 354 | 111.99 | temperature | 25 | 720 | > th | dose independent | rect. | 15 | 5 |
| 371 | 112.12 | temperature | 25 | 720 | < th | dose independent | rect. | 14 | 7 |
| 451 | 112.84 | temperature | 25 | 720 | < th | dose independent | rect. | 13 | 10 |
| 663 | 114.24 | temperature | 25 | 720 | > th | dose independent | rect. | 14 | 10 |
| 711 | 114.52 | temperature | 30 | 270 | < th | dose dependent | rect. | 17 | 16 |
| 720 | 114.57 | temperature | 20 | 720 | > th | dose dependent | no | NA | NA |
| 856 | 115.49 | temperature | 20 | 720 | > th | dose dependent | rect. | 21 | 23 |
| 904 | 115.80 | temperature | 25 | 720 | > th | dose dependent | sin | 11 | NA |
| 951 | 115.99 | temperature | 30 | 720 | < th | dose dependent | rect. | 5 | 19 |