Os08g0101000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Transcriptional factor B3 family protein.
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Os08g0101000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Transcriptional factor B3 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 78.97 | 0.418 | 7.87 | 0.0384 | 1.16 | 1.29 | -0.206 | 2.6 | -0.583 | 21.7 | 22.5 | 12 | -- | -- |
| 82.54 | 0.426 | 7.91 | -0.337 | 1.17 | 1.55 | -0.606 | -- | -0.654 | 21.9 | 24.18 | 9 | -- | -- |
| 79.06 | 0.417 | 7.87 | 0.0843 | 1.17 | 1.27 | -- | 2.8 | -0.571 | 21.6 | 22.44 | 12 | -- | -- |
| 83.42 | 0.425 | 7.91 | -0.318 | 1.16 | 1.54 | -- | -- | -0.658 | 21.9 | 24.26 | 12 | -- | -- |
| 121.59 | 0.514 | 7.87 | -0.149 | -- | 1.66 | -- | 1.8 | -0.687 | -- | 18.73 | 554 | -- | -- |
| 120.04 | 0.514 | 7.87 | -0.0779 | 1.16 | -- | -0.313 | -- | -0.476 | 19.9 | -- | -- | -- | -- |
| 120.32 | 0.514 | 7.87 | -0.0689 | 1.16 | -- | -- | -- | -0.476 | 19.9 | -- | -- | -- | -- |
| 124.87 | 0.52 | 7.91 | -0.489 | -- | 1.67 | -- | -- | -0.78 | -- | 19.88 | 556 | -- | -- |
| 86.01 | 0.432 | 7.9 | -- | 1.15 | 1.46 | -- | -- | -0.597 | 21.8 | 24.5 | 12 | -- | -- |
| 193.69 | 0.65 | 7.84 | -0.0821 | -- | -- | -- | -- | -0.492 | -- | -- | -- | -- | -- |
| 120.44 | 0.513 | 7.87 | -- | 1.16 | -- | -- | -- | -0.468 | 19.9 | -- | -- | -- | -- |
| 130.22 | 0.531 | 7.89 | -- | -- | 1.49 | -- | -- | -0.685 | -- | 21.8 | 526 | -- | -- |
| 193.87 | 0.65 | 7.84 | -- | -- | -- | -- | -- | -0.483 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 75.02 | temperature | 20 | 10 | > th | dose dependent | rect. | 6 | 14 |
| 3 | 76.20 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 21 |
| 6 | 77.23 | temperature | 10 | 30 | > th | dose dependent | rect. | 21 | 23 |
| 7 | 77.28 | temperature | 20 | 30 | > th | dose dependent | rect. | 21 | 23 |
| 9 | 77.38 | temperature | 20 | 10 | > th | dose dependent | rect. | 6 | 23 |
| 27 | 79.23 | temperature | 20 | 720 | > th | dose dependent | rect. | 6 | 3 |
| 32 | 79.41 | temperature | 20 | 90 | > th | dose dependent | sin | 1 | NA |
| 44 | 80.11 | temperature | 30 | 270 | < th | dose dependent | rect. | 24 | 22 |
| 58 | 80.39 | temperature | 20 | 10 | > th | dose dependent | rect. | 1 | 19 |
| 72 | 80.55 | temperature | 10 | 270 | > th | dose dependent | rect. | 3 | 23 |
| 74 | 80.63 | temperature | 20 | 10 | > th | dose dependent | rect. | 3 | 17 |
| 80 | 80.69 | temperature | 20 | 10 | > th | dose dependent | rect. | 6 | 18 |
| 84 | 80.73 | temperature | 20 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 97 | 80.83 | temperature | 15 | 720 | > th | dose dependent | rect. | 21 | 20 |
| 99 | 80.85 | temperature | 25 | 10 | > th | dose dependent | no | NA | NA |
| 102 | 80.88 | temperature | 25 | 10 | > th | dose dependent | rect. | 3 | 23 |
| 104 | 80.90 | temperature | 20 | 720 | > th | dose dependent | sin | 5 | NA |
| 163 | 81.37 | temperature | 20 | 720 | > th | dose dependent | rect. | 23 | 16 |
| 168 | 81.40 | temperature | 15 | 270 | > th | dose dependent | rect. | 18 | 23 |
| 187 | 81.59 | temperature | 25 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 215 | 81.75 | temperature | 10 | 90 | > th | dose dependent | no | NA | NA |
| 262 | 82.03 | temperature | 10 | 10 | > th | dose dependent | no | NA | NA |
| 297 | 82.21 | temperature | 25 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 369 | 82.76 | temperature | 25 | 10 | > th | dose dependent | rect. | 13 | 23 |
| 481 | 83.49 | temperature | 25 | 10 | > th | dose dependent | rect. | 9 | 23 |
| 731 | 84.79 | temperature | 25 | 10 | > th | dose dependent | rect. | 19 | 23 |
| 765 | 84.93 | temperature | 25 | 10 | > th | dose dependent | rect. | 11 | 23 |
| 802 | 85.19 | temperature | 30 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 843 | 85.43 | temperature | 25 | 720 | > th | dose independent | rect. | 6 | 3 |
| 853 | 85.49 | temperature | 30 | 30 | < th | dose dependent | rect. | 7 | 23 |
| 856 | 85.51 | temperature | 30 | 90 | < th | dose dependent | no | NA | NA |
| 904 | 85.76 | temperature | 25 | 30 | > th | dose independent | rect. | 1 | 19 |
| 921 | 85.82 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 10 |
| 927 | 85.85 | temperature | 25 | 90 | > th | dose independent | rect. | 3 | 16 |
| 935 | 85.89 | temperature | 30 | 270 | < th | dose dependent | rect. | 7 | 23 |
| 937 | 85.95 | temperature | 25 | 90 | > th | dose independent | rect. | 6 | 13 |
| 944 | 85.99 | temperature | 30 | 30 | < th | dose dependent | rect. | 11 | 23 |
| 956 | 86.05 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 23 |
| 960 | 86.07 | temperature | 30 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 978 | 86.14 | temperature | 30 | 30 | < th | dose dependent | rect. | 13 | 23 |
| 985 | 86.17 | temperature | 30 | 30 | < th | dose dependent | rect. | 15 | 23 |
| 995 | 86.23 | temperature | 25 | 10 | > th | dose independent | rect. | 6 | 14 |