BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os08g0101000 Os08g0101000|AK107456
(362 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G24650.1 | chr3:8997911-9000780 FORWARD LENGTH=721 129 2e-30
AT1G28300.1 | chr1:9897054-9899838 REVERSE LENGTH=364 114 1e-25
AT3G26790.1 | chr3:9854025-9855748 REVERSE LENGTH=314 111 5e-25
AT2G30470.1 | chr2:12980904-12984724 REVERSE LENGTH=791 89 3e-18
AT4G32010.1 | chr4:15481231-15484897 FORWARD LENGTH=781 85 6e-17
AT4G21550.1 | chr4:11463104-11468486 FORWARD LENGTH=714 72 3e-13
AT1G68840.1 | chr1:25880442-25881500 FORWARD LENGTH=353 60 2e-09
AT2G36080.1 | chr2:15148612-15151411 REVERSE LENGTH=245 60 2e-09
AT1G25560.1 | chr1:8981891-8982976 REVERSE LENGTH=362 59 3e-09
AT1G13260.1 | chr1:4542386-4543420 FORWARD LENGTH=345 59 5e-09
AT4G01500.1 | chr4:639791-640792 FORWARD LENGTH=334 57 1e-08
AT3G25730.1 | chr3:9396505-9397506 FORWARD LENGTH=334 55 6e-08
AT2G46870.1 | chr2:19261313-19262245 FORWARD LENGTH=311 54 2e-07
AT1G51120.1 | chr1:18938091-18939149 FORWARD LENGTH=353 52 7e-07
AT5G06250.2 | chr5:1892714-1894058 REVERSE LENGTH=283 51 8e-07
AT3G61970.1 | chr3:22951829-22952728 FORWARD LENGTH=300 50 2e-06
AT1G01030.1 | chr1:11864-12940 REVERSE LENGTH=359 50 2e-06
>AT3G24650.1 | chr3:8997911-9000780 FORWARD LENGTH=721
Length = 720
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 57/105 (54%), Positives = 79/105 (75%)
Query: 250 QVILRKELTKSDVGNVGRIVLPKKDAEASLPPLLQRDPLILHMDDMVLPVTWKFKYRYWP 309
+ +L+K L +SDVGN+GRIVLPKK+AE LP L RD + L M+D+ W +YR+WP
Sbjct: 569 RFLLQKVLKQSDVGNLGRIVLPKKEAETHLPELEARDGISLAMEDIGTSRVWNMRYRFWP 628
Query: 310 NNKSRMYILDSAGEFLKTHGLQAGDVIIIYKNLAPGKFIIRGEKA 354
NNKSRMY+L++ G+F+KT+GLQ GD I+IY ++ GK++IRG K
Sbjct: 629 NNKSRMYLLENTGDFVKTNGLQEGDFIVIYSDVKCGKYLIRGVKV 673
>AT1G28300.1 | chr1:9897054-9899838 REVERSE LENGTH=364
Length = 363
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 75/105 (71%)
Query: 237 DSRATKLLNSGEYQVILRKELTKSDVGNVGRIVLPKKDAEASLPPLLQRDPLILHMDDMV 296
DS ++ + +V+ KEL SDVG++GRIVLPK+DAEA+LP L ++ +++ M D+
Sbjct: 155 DSYQQSTFDNKKLRVLCEKELKNSDVGSLGRIVLPKRDAEANLPKLSDKEGIVVQMRDVF 214
Query: 297 LPVTWKFKYRYWPNNKSRMYILDSAGEFLKTHGLQAGDVIIIYKN 341
+W FKY++W NNKSRMY+L++ GEF+K +G + GD + IY++
Sbjct: 215 SMQSWSFKYKFWSNNKSRMYVLENTGEFVKQNGAEIGDFLTIYED 259
>AT3G26790.1 | chr3:9854025-9855748 REVERSE LENGTH=314
Length = 313
Score = 111 bits (278), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 48/112 (42%), Positives = 76/112 (67%)
Query: 250 QVILRKELTKSDVGNVGRIVLPKKDAEASLPPLLQRDPLILHMDDMVLPVTWKFKYRYWP 309
+ + +KEL SDV ++ R++LPKK AEA LP L ++ + + M+D+ W FKYRYWP
Sbjct: 89 RFLFQKELKNSDVSSLRRMILPKKAAEAHLPALECKEGIPIRMEDLDGFHVWTFKYRYWP 148
Query: 310 NNKSRMYILDSAGEFLKTHGLQAGDVIIIYKNLAPGKFIIRGEKAIHQQTTN 361
NN SRMY+L++ G+F+ HGLQ GD I++Y++L ++I+ KA ++ +
Sbjct: 149 NNNSRMYVLENTGDFVNAHGLQLGDFIMVYQDLYSNNYVIQARKASEEEEVD 200
>AT2G30470.1 | chr2:12980904-12984724 REVERSE LENGTH=791
Length = 790
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 62/105 (59%), Gaps = 1/105 (0%)
Query: 252 ILRKELTKSDVGNVGRIVLPKKDAEASLPPLLQRDPLILHMDDMVLPVTWKFKYRYWPNN 311
+ K L+ SD G +GR+VLPK AEA PP+ Q + + L + D V W F++RYWPNN
Sbjct: 294 LFEKTLSASDAGRIGRLVLPKACAEAYFPPISQSEGIPLKIQD-VRGREWTFQFRYWPNN 352
Query: 312 KSRMYILDSAGEFLKTHGLQAGDVIIIYKNLAPGKFIIRGEKAIH 356
SRMY+L+ +++ LQAGD + + GK I+ KA +
Sbjct: 353 NSRMYVLEGVTPCIQSMMLQAGDTVTFSRVDPGGKLIMGSRKAAN 397
>AT4G32010.1 | chr4:15481231-15484897 FORWARD LENGTH=781
Length = 780
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 62/109 (56%), Gaps = 1/109 (0%)
Query: 252 ILRKELTKSDVGNVGRIVLPKKDAEASLPPLLQRDPLILHMDDMVLPVTWKFKYRYWPNN 311
+ K L+ SD G +GR+VLPK AEA PP+ + L L + D + W F++R+WPNN
Sbjct: 285 LFEKVLSASDAGRIGRLVLPKACAEAYFPPISLPEGLPLKIQD-IKGKEWVFQFRFWPNN 343
Query: 312 KSRMYILDSAGEFLKTHGLQAGDVIIIYKNLAPGKFIIRGEKAIHQQTT 360
SRMY+L+ +++ LQAGD + + GK ++ KA + T
Sbjct: 344 NSRMYVLEGVTPCIQSMQLQAGDTVTFSRTEPEGKLVMGYRKATNSTAT 392
>AT4G21550.1 | chr4:11463104-11468486 FORWARD LENGTH=714
Length = 713
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 61/100 (61%), Gaps = 4/100 (4%)
Query: 252 ILRKELTKSDVGNVGRIVLPKKDAEASLPPLLQRDPLILHMDDMVLPVTWKFKYRYWPNN 311
+ K L+ +D G R+VLPKK AEA LP L + L + D + W+F++R+WP++
Sbjct: 327 LFEKILSATDTGK--RLVLPKKYAEAFLPQLSHTKGVPLTVQD-PMGKEWRFQFRFWPSS 383
Query: 312 KSRMYILDSAGEFLKTHGLQAGDVIIIYKNLAPGKFIIRG 351
K R+Y+L+ F++T LQAGD +I+ L P + +I G
Sbjct: 384 KGRIYVLEGVTPFIQTLQLQAGDT-VIFSRLDPERKLILG 422
>AT1G68840.1 | chr1:25880442-25881500 FORWARD LENGTH=353
Length = 352
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 75/152 (49%), Gaps = 16/152 (10%)
Query: 198 KPEILPRVVKSS--DELETRNSNVEFHSETVGTLPESKQGHDSRATKLLNSGEYQVILRK 255
K EI+ + K + DELE N F S V + ++ K+L + E V+ K
Sbjct: 135 KAEIVDMLRKHTYADELEQNNKRQLFLS--VDANGKRNGSSTTQNDKVLKTRE--VLFEK 190
Query: 256 ELTKSDVGNVGRIVLPKKDAEASLP-----PLLQRDPLILHMDDMVLPVTWKFKYRYWPN 310
+T SDVG + R+V+PK+ AE P P + + LI D V W+F+Y YW
Sbjct: 191 AVTPSDVGKLNRLVIPKQHAEKHFPLPSPSPAVTKGVLINFED--VNGKVWRFRYSYW-- 246
Query: 311 NKSRMYILDSA-GEFLKTHGLQAGDVIIIYKN 341
N S+ Y+L F+K L+AGDV+ ++
Sbjct: 247 NSSQSYVLTKGWSRFVKEKNLRAGDVVTFERS 278
>AT2G36080.1 | chr2:15148612-15151411 REVERSE LENGTH=245
Length = 244
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 60/110 (54%), Gaps = 12/110 (10%)
Query: 248 EYQVILRKELTKSDVGNVGRIVLPKKDAEASLP------PLLQRDPLILHMDDMVLPVTW 301
E + + K LT SDVG + R+V+PK+ AE P +++ L+ D+ P W
Sbjct: 33 EKEALFEKPLTPSDVGKLNRLVIPKQHAERYFPLAAAAADAVEKGLLLCFEDEEGKP--W 90
Query: 302 KFKYRYWPNNKSRMYILDSA-GEFLKTHGLQAGDVIIIYKNLAP-GKFII 349
+F+Y YW N S+ Y+L ++K L AGDV++ +++ + G+F I
Sbjct: 91 RFRYSYW--NSSQSYVLTKGWSRYVKEKHLDAGDVVLFHRHRSDGGRFFI 138
>AT1G25560.1 | chr1:8981891-8982976 REVERSE LENGTH=362
Length = 361
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 59/108 (54%), Gaps = 14/108 (12%)
Query: 250 QVILRKELTKSDVGNVGRIVLPKKDAEASLP-----PLLQRDP-----LILHMDDMVLPV 299
+V+ K +T SDVG + R+V+PK+ AE P + +P ++++++D V
Sbjct: 192 EVLFEKTVTPSDVGKLNRLVIPKQHAEKHFPLPAMTTAMGMNPSPTKGVLINLEDRTGKV 251
Query: 300 TWKFKYRYWPNNKSRMYILDSA-GEFLKTHGLQAGDVIIIYKNLAPGK 346
W+F+Y YW N S+ Y+L F+K L+AGDV+ ++ P +
Sbjct: 252 -WRFRYSYW--NSSQSYVLTKGWSRFVKEKNLRAGDVVCFERSTGPDR 296
>AT1G13260.1 | chr1:4542386-4543420 FORWARD LENGTH=345
Length = 344
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 71/145 (48%), Gaps = 11/145 (7%)
Query: 198 KPEILPRVVKSS--DELETRNSNVEFHSETVGTLPESKQGHDSRATKLLNSGEYQVILRK 255
K EI+ + K + +ELE + TL S +D +T S E + K
Sbjct: 133 KSEIVDMLRKHTYNEELEQSKRRRNGNGNMTRTLLTSGLSNDGVSTTGFRSAE--ALFEK 190
Query: 256 ELTKSDVGNVGRIVLPKKDAEASLP---PLLQRDPLILHMDDMVLPVTWKFKYRYWPNNK 312
+T SDVG + R+V+PK AE P + ++L+ +D+ V W+F+Y YW N
Sbjct: 191 AVTPSDVGKLNRLVIPKHHAEKHFPLPSSNVSVKGVLLNFEDVNGKV-WRFRYSYW--NS 247
Query: 313 SRMYILDSA-GEFLKTHGLQAGDVI 336
S+ Y+L F+K L+AGDV+
Sbjct: 248 SQSYVLTKGWSRFVKEKNLRAGDVV 272
>AT4G01500.1 | chr4:639791-640792 FORWARD LENGTH=334
Length = 333
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 55/117 (47%), Gaps = 4/117 (3%)
Query: 229 LPESKQGHDSRATKLLNSGEYQVILRKELTKSDVGNVGRIVLPKKDAEASLPPLLQRDPL 288
L E + +S + + K LT SDVG + R+V+PK+ AE P ++
Sbjct: 12 LAEIRASSSDHTNYFYSSERREHMFDKVLTPSDVGKLNRLVIPKQHAENFFPLEDNQNGT 71
Query: 289 ILHMDDMVLPVTWKFKYRYWPNNKSRMYILDSA-GEFLKTHGLQAGDVIIIYKNLAP 344
+L D + W+F+Y YW N S+ Y++ F+K L AGD + Y+ P
Sbjct: 72 VLDFQDKNGKM-WRFRYSYW--NSSQSYVMTKGWSRFVKEKKLFAGDTVSFYRGYIP 125
>AT3G25730.1 | chr3:9396505-9397506 FORWARD LENGTH=334
Length = 333
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 58/107 (54%), Gaps = 10/107 (9%)
Query: 250 QVILRKELTKSDVGNVGRIVLPKKDAEASLP-PL----LQRDPLILHMDDMVLPVTWKFK 304
+++ K +T SDVG + R+V+PK AE P PL + ++L+ +D+ V W+F+
Sbjct: 180 ELLFEKTVTPSDVGKLNRLVIPKHQAEKHFPLPLGNNNVSVKGMLLNFEDVNGKV-WRFR 238
Query: 305 YRYWPNNKSRMYILDSA-GEFLKTHGLQAGDVIIIYK-NLAPGKFII 349
Y YW N S+ Y+L F+K L AGD+I + N KF I
Sbjct: 239 YSYW--NSSQSYVLTKGWSRFVKEKRLCAGDLISFKRSNDQDQKFFI 283
>AT2G46870.1 | chr2:19261313-19262245 FORWARD LENGTH=311
Length = 310
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 49/88 (55%), Gaps = 6/88 (6%)
Query: 252 ILRKELTKSDVGNVGRIVLPKKDAEASLP--PLLQRDPLILHMDDMVLPVTWKFKYRYWP 309
+ K +T SDVG + R+V+PK+ AE P L+L+ +D+ +W+F+Y YW
Sbjct: 34 MFDKVVTPSDVGKLNRLVIPKQHAERFFPLDSSSNEKGLLLNFEDLT-GKSWRFRYSYW- 91
Query: 310 NNKSRMYILDSA-GEFLKTHGLQAGDVI 336
N S+ Y++ F+K L AGD++
Sbjct: 92 -NSSQSYVMTKGWSRFVKDKKLDAGDIV 118
>AT1G51120.1 | chr1:18938091-18939149 FORWARD LENGTH=353
Length = 352
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 52/104 (50%), Gaps = 14/104 (13%)
Query: 252 ILRKELTKSDVGNVGRIVLPKKDAEASLPPLLQ-----------RDPLILHMDDMVLPVT 300
+ +KELT SDVG + R+V+PKK A +P + D ++ D +
Sbjct: 177 LFQKELTPSDVGKLNRLVIPKKYAVKYMPFISDDQSEKETSEGVEDVEVVFYDRAMRQ-- 234
Query: 301 WKFKYRYWPNNKSRMYILDSAGEFLKTHGLQAGDVIIIYKNLAP 344
WKF+Y YW +++S ++ G F+K L+ D+I+ Y P
Sbjct: 235 WKFRYCYWRSSQSFVFTRGWNG-FVKEKNLKEKDIIVFYTCDVP 277
>AT5G06250.2 | chr5:1892714-1894058 REVERSE LENGTH=283
Length = 282
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 53/115 (46%), Gaps = 16/115 (13%)
Query: 250 QVILRKELTKSDVGNVGRIVLPKKDAEASLP------------PLLQRDPLILHMDDMVL 297
+ + K LT SDVG + R+V+PK+ AE P ++L +D
Sbjct: 43 ESLFEKSLTPSDVGKLNRLVIPKQHAEKYFPLNAVLVSSAAADTSSSEKGMLLSFEDES- 101
Query: 298 PVTWKFKYRYWPNNKSRMYILDSA-GEFLKTHGLQAGDVIIIYKNLAPGKFIIRG 351
+W+F+Y YW N S+ Y+L F+K L GDV+ ++ + + + G
Sbjct: 102 GKSWRFRYSYW--NSSQSYVLTKGWSRFVKDKQLDPGDVVFFQRHRSDSRRLFIG 154
>AT3G61970.1 | chr3:22951829-22952728 FORWARD LENGTH=300
Length = 299
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 54/103 (52%), Gaps = 9/103 (8%)
Query: 245 NSGEYQVILRKELTKSDVGNVGRIVLPKKDAEASLP-----PLLQRDPLILHMDDMVLPV 299
+S E + + K +T SDVG + R+V+PK+ AE P L+L+ +D
Sbjct: 15 SSMEREHMFDKVVTPSDVGKLNRLVIPKQHAERYFPLDNSTTNDSNKGLLLNFEDRS-GN 73
Query: 300 TWKFKYRYWPNNKSRMYILDSA-GEFLKTHGLQAGDVIIIYKN 341
+W+F+Y YW N S+ Y++ F+K L AGD++ ++
Sbjct: 74 SWRFRYSYW--NSSQSYVMTKGWSRFVKDKKLDAGDIVSFQRD 114
>AT1G01030.1 | chr1:11864-12940 REVERSE LENGTH=359
Length = 358
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 52/99 (52%), Gaps = 6/99 (6%)
Query: 248 EYQVILRKELTKSDVGNVGRIVLPKKDAEASLP--PLLQRDPLILHMDDMVLPVTWKFKY 305
E + + K +T SDVG + R+V+PK+ AE P ++ +L+ D + W+F+Y
Sbjct: 51 EKEHMFDKVVTPSDVGKLNRLVIPKQHAERYFPLDSSNNQNGTLLNFQDRNGKM-WRFRY 109
Query: 306 RYWPNNKSRMYILDSA-GEFLKTHGLQAGDVIIIYKNLA 343
YW N S+ Y++ F+K L AGD++ + +
Sbjct: 110 SYW--NSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRGIG 146
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.316 0.133 0.413
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 7,012,720
Number of extensions: 297890
Number of successful extensions: 907
Number of sequences better than 1.0e-05: 17
Number of HSP's gapped: 900
Number of HSP's successfully gapped: 17
Length of query: 362
Length of database: 11,106,569
Length adjustment: 100
Effective length of query: 262
Effective length of database: 8,364,969
Effective search space: 2191621878
Effective search space used: 2191621878
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 112 (47.8 bits)