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Os07g0693400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Armadillo-like helical domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.1 (0.0113) R2 : 0.571
β1 : -- (--) R2dD : -- R2D : --
β2 : 0.719 (0.0292) R2dC : 0.575 R2C : 0.571
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.0097 (0.0237) R2dN8 : 0.000204 R2N8 : -0.00376
σ : 0.212
deviance : 20.6
__
_____
C
peak time of C : 7.31
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
17.63 0.197 10.1 0.387 0.72 0.364 0.0803 -0.132 0.101 7.25 19.39 3923 -- --
17.65 0.196 10.1 0.369 0.711 0.384 0.0764 -- 0.1 7.3 19.3 4018 -- --
17.63 0.196 10.1 0.382 0.721 0.386 -- -0.0377 0.102 7.26 19 4066 -- --
17.62 0.196 10.1 0.381 0.723 0.402 -- -- 0.0976 7.25 19 4055 -- --
45.13 0.313 10.1 0.425 -- 0.399 -- -0.0302 0.119 -- 18.96 6431 -- --
19.96 0.209 10.1 0.151 0.717 -- 0.103 -- 0.00759 7.33 -- -- -- --
19.98 0.209 10.1 0.153 0.718 -- -- -- 0.00738 7.33 -- -- -- --
44.72 0.311 10.1 0.395 -- 0.381 -- -- 0.122 -- 19.43 3590 -- --
20.16 0.209 10.1 -- 0.721 0.201 -- -- 0.00674 7.3 17.47 3449 -- --
47.35 0.322 10.1 0.166 -- -- -- -- 0.0194 -- -- -- -- --
20.6 0.212 10.1 -- 0.719 -- -- -- -0.0097 7.31 -- -- -- --
44.42 0.31 10.1 -- -- 0.293 -- -- 0.106 -- 21.9 655 -- --
48.07 0.324 10.1 -- -- -- -- -- 0.000991 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 16.59 temperature 10 30 > th dose dependent rect. 6 23
12 17.11 temperature 30 90 < th dose independent rect. 4 13
20 17.27 radiation 10 4320 < th dose independent rect. 18 5
22 17.31 temperature 15 270 > th dose dependent rect. 21 13
43 17.44 temperature 20 270 > th dose dependent sin 8 NA
52 17.46 temperature 20 90 > th dose dependent rect. 17 23
59 17.54 temperature 10 43200 > th dose independent rect. 8 9
69 17.59 radiation 10 4320 < th dose independent rect. 18 1
75 17.60 temperature 10 43200 < th dose dependent rect. 3 21
76 17.61 temperature 20 1440 > th dose independent rect. 1 6
77 17.61 temperature 20 1440 < th dose independent rect. 1 6
79 17.61 temperature 20 270 > th dose independent rect. 21 13
81 17.61 temperature 20 30 > th dose dependent rect. 22 18
85 17.62 humidity 80 43200 < th dose independent rect. 17 2
86 17.62 temperature 20 1440 > th dose independent rect. 3 4
87 17.62 temperature 20 1440 < th dose independent rect. 3 4
95 17.62 temperature 10 43200 < th dose dependent rect. 22 7
122 17.63 temperature 10 43200 > th dose independent rect. 9 20
147 17.64 temperature 10 43200 > th dose independent rect. 21 8
152 17.64 temperature 20 90 > th dose independent rect. 6 22
154 17.64 temperature 10 43200 < th dose dependent sin 11 NA
186 17.65 temperature 10 43200 > th dose independent rect. 12 17
192 17.65 temperature 10 43200 < th dose dependent no NA NA
316 17.66 humidity 80 43200 > th dose independent rect. 17 2
321 17.66 temperature 10 43200 < th dose independent rect. 21 8
356 17.66 temperature 10 43200 < th dose independent rect. 3 21
361 17.66 temperature 10 43200 < th dose dependent sin 8 NA
372 17.67 temperature 10 43200 < th dose independent sin 13 NA
374 17.67 temperature 20 1440 > th dose independent rect. 3 1
376 17.67 temperature 10 43200 > th dose independent rect. 23 4
411 17.68 temperature 10 43200 < th dose independent sin 11 NA
416 17.68 temperature 15 14400 > th dose independent rect. 12 2
441 17.68 temperature 10 43200 > th dose independent rect. 21 20
449 17.68 temperature 10 43200 < th dose dependent sin 23 NA
472 17.69 temperature 10 43200 > th dose independent sin 10 NA
477 17.69 temperature 10 43200 < th dose independent sin 9 NA
480 17.69 temperature 10 43200 < th dose independent no NA NA
507 17.69 temperature 10 43200 > th dose independent rect. 21 14
609 17.69 temperature 10 43200 > th dose independent rect. 2 23
630 17.69 temperature 10 43200 < th dose dependent sin 4 NA
632 17.69 temperature 15 43200 < th dose dependent rect. 22 1
633 17.69 temperature 10 43200 < th dose dependent rect. 4 2
650 17.70 temperature 10 43200 > th dose independent sin 8 NA
653 17.70 temperature 10 43200 > th dose independent no NA NA
654 17.70 temperature 10 43200 < th dose independent sin 7 NA
658 17.70 temperature 10 43200 < th dose independent rect. 4 2
676 17.70 temperature 10 43200 > th dose independent rect. 23 12
714 17.70 temperature 10 43200 > th dose independent rect. 16 21
728 17.70 temperature 10 43200 > th dose independent rect. 12 23
735 17.70 temperature 10 43200 > th dose independent rect. 23 23
749 17.70 temperature 15 43200 < th dose dependent rect. 1 1
868 17.71 temperature 10 43200 > th dose independent rect. 4 1
870 17.71 temperature 20 720 > th dose independent rect. 22 3
874 17.71 wind 9 14400 > th dose independent rect. 5 7
906 17.71 temperature 10 43200 > th dose independent rect. 16 19
957 17.71 temperature 15 43200 < th dose dependent rect. 1 5
991 17.71 temperature 15 43200 < th dose dependent rect. 1 13