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Notice!
This gene did NOT pass the analysis criteria (log2(expression) > 5 in more than 80% of samples & normality of residuals was not rejected).
The modeling results may be unreliable.

Os07g0692800

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Eukaryotic translation initiation factor 2 subunit 1 (Eukaryotic translation initiation factor 2 alpha subunit) (eIF-2-alpha) (EIF- 2alpha) (EIF-2A) (Fragment).


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 3.02 (0.017) R2 : 0.00525
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.0554 (0.0357) R2dN8 : 0.00678 R2N8 : 0.00525
σ : 0.32
deviance : 46.91
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
43.94 0.311 3.03 0.181 0.207 -0.185 0.217 -0.593 0.04 6 89.69 131 -- --
44.5 0.311 3.03 0.157 0.197 -0.243 0.0851 -- 0.0319 6.41 92 155 -- --
44.02 0.309 3.03 0.181 0.205 -0.179 -- -0.501 0.0388 5.94 89.32 129 -- --
44.49 0.311 3.03 0.161 0.201 -0.245 -- -- 0.032 6.21 91.89 149 -- --
45.55 0.314 3.03 0.174 -- -0.0418 -- -0.494 0.0681 -- 88 114 -- --
45.56 0.316 3.02 0.134 0.117 -- 0.154 -- 0.0698 8.35 -- -- -- --
45.6 0.316 3.02 0.138 0.122 -- -- -- 0.0691 7.56 -- -- -- --
46.07 0.316 3.02 0.154 -- -0.106 -- -- 0.0564 -- 92 48 -- --
45.17 0.313 3.03 -- 0.196 -0.225 -- -- 0.0174 6.25 91.91 153 -- --
46.4 0.318 3.02 0.14 -- -- -- -- 0.0709 -- -- -- -- --
46.1 0.318 3.02 -- 0.123 -- -- -- 0.0537 7.48 -- -- -- --
46.68 0.318 3.03 -- -- -0.0902 -- -- 0.0412 -- 92 48 -- --
46.91 0.32 3.02 -- -- -- -- -- 0.0554 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 30.08 wind 3.0 30 < th dose dependent rect. 2 1
2 30.08 temperature 15.0 30 > th dose dependent rect. 2 1
7 30.15 atmosphere 1005.0 30 > th dose dependent rect. 2 1
8 30.16 temperature 20.0 30 > th dose independent rect. 2 1
9 30.17 wind 3.0 30 < th dose independent rect. 2 1
11 30.18 humidity 80.0 30 > th dose independent rect. 2 1
13 30.24 humidity 50.0 30 > th dose dependent rect. 2 1
16 30.25 wind 9.0 30 < th dose independent rect. 2 1
17 30.25 temperature 10.0 30 > th dose independent rect. 2 1
19 30.25 temperature 30.0 30 < th dose independent rect. 2 1
20 30.25 humidity 50.0 30 > th dose independent rect. 2 1
23 30.25 atmosphere 995.0 30 > th dose independent rect. 2 1
24 30.25 atmosphere 1010.0 30 < th dose independent rect. 2 1
26 30.25 radiation 1.0 30 < th dose independent rect. 2 1
31 30.25 precipitation 0.1 30 < th dose independent rect. 2 1
32 30.25 temperature 10.0 30 > th dose independent rect. 3 23
33 30.25 radiation 1.0 30 < th dose dependent rect. 2 1
38 30.25 precipitation 0.1 30 < th dose dependent rect. 2 1
43 30.30 atmosphere 1005.0 30 > th dose independent rect. 2 1
48 30.57 atmosphere 1015.0 30 < th dose dependent rect. 2 1
49 30.92 temperature 30.0 30 < th dose dependent rect. 2 1
58 31.82 wind 1.0 30 > th dose independent rect. 2 1
68 32.45 wind 9.0 30 < th dose independent rect. 3 23
111 39.40 atmosphere 995.0 30 > th dose independent rect. 3 23
117 40.26 precipitation 0.1 30 < th dose independent rect. 3 23
118 40.26 precipitation 0.1 30 < th dose dependent rect. 3 23
120 40.71 wind 1.0 30 < th dose independent rect. 24 3
132 41.63 atmosphere 1015.0 30 < th dose independent rect. 3 23
133 41.85 atmosphere 1015.0 1440 < th dose independent rect. 3 1
136 41.91 wind 1.0 30 > th dose dependent rect. 2 1
138 41.99 radiation 10.0 30 < th dose dependent rect. 3 23
143 42.04 wind 9.0 1440 < th dose independent rect. 3 1
144 42.04 temperature 10.0 1440 > th dose independent rect. 3 1
147 42.04 temperature 30.0 1440 < th dose independent rect. 3 1
151 42.04 humidity 50.0 1440 > th dose independent rect. 3 1
160 42.04 atmosphere 995.0 1440 > th dose independent rect. 3 1
161 42.04 radiation 1.0 1440 < th dose independent rect. 3 1
181 42.04 temperature 10.0 1440 > th dose independent rect. 4 23
184 42.04 radiation 1.0 1440 < th dose dependent rect. 3 1
211 42.35 humidity 90.0 90 < th dose independent rect. 2 1
212 42.37 temperature 15.0 720 > th dose independent rect. 3 8
216 42.40 radiation 40.0 30 < th dose independent rect. 11 16
222 42.46 atmosphere 1015.0 720 < th dose independent rect. 3 8
223 42.47 wind 9.0 720 < th dose independent rect. 19 8
224 42.48 wind 9.0 720 < th dose independent rect. 3 8
225 42.48 radiation 1.0 720 < th dose dependent rect. 19 8
226 42.49 temperature 10.0 720 > th dose independent rect. 19 8
227 42.49 temperature 30.0 720 < th dose independent rect. 19 8
228 42.49 humidity 50.0 720 > th dose independent rect. 19 8
229 42.49 atmosphere 995.0 720 > th dose independent rect. 19 8
230 42.49 radiation 1.0 720 < th dose independent rect. 19 8
235 42.49 temperature 10.0 720 > th dose independent rect. 3 16
240 42.50 temperature 15.0 720 > th dose independent rect. 15 8
241 42.50 temperature 10.0 30 > th dose dependent rect. 3 23
244 42.52 atmosphere 995.0 720 > th dose independent rect. 3 8
245 42.52 temperature 10.0 720 > th dose independent rect. 11 16
246 42.53 temperature 10.0 720 > th dose independent rect. 7 8
247 42.53 atmosphere 1015.0 720 < th dose independent rect. 7 8
248 42.53 temperature 10.0 720 > th dose independent rect. 15 16
249 42.53 temperature 15.0 720 > th dose independent rect. 23 16
265 42.63 radiation 40.0 720 < th dose independent rect. 15 16
267 42.64 radiation 40.0 720 < th dose independent rect. 15 8
268 42.64 precipitation 0.1 720 < th dose independent rect. 3 8
269 42.64 humidity 50.0 30 > th dose independent rect. 3 23
271 42.64 precipitation 0.1 720 < th dose dependent rect. 3 8
273 42.65 radiation 10.0 30 < th dose independent rect. 3 23
278 42.66 wind 9.0 30 < th dose dependent rect. 3 23
280 42.68 radiation 40.0 30 < th dose dependent rect. 11 16
284 42.72 wind 9.0 720 < th dose independent rect. 15 16
286 42.75 wind 9.0 720 < th dose independent rect. 7 8
295 42.86 atmosphere 1015.0 720 < th dose independent rect. 3 16
298 42.87 radiation 1.0 720 > th dose independent rect. 7 8
299 42.88 wind 9.0 720 < th dose independent rect. 3 16
302 42.90 wind 9.0 720 < th dose independent rect. 15 8
303 42.90 wind 9.0 720 < th dose independent rect. 23 16
305 42.91 precipitation 0.1 720 < th dose independent rect. 23 16
306 42.91 precipitation 0.1 720 < th dose dependent rect. 23 16
339 42.99 humidity 80.0 10 > th dose independent rect. 12 1
354 43.13 humidity 50.0 720 > th dose independent rect. 3 8
356 43.14 wind 1.0 10 < th dose independent rect. 11 16
362 43.17 radiation 40.0 90 < th dose independent rect. 7 20
370 43.21 wind 3.0 10 < th dose dependent rect. 11 16
377 43.26 humidity 50.0 30 > th dose dependent rect. 3 8
378 43.27 wind 1.0 10 < th dose independent rect. 14 13
383 43.29 wind 1.0 10 < th dose independent rect. 17 10
386 43.29 wind 1.0 10 < th dose independent rect. 7 20
394 43.30 wind 9.0 720 < th dose independent rect. 11 16
398 43.31 precipitation 0.1 270 > th dose independent rect. 8 1
402 43.31 precipitation 0.1 270 > th dose dependent rect. 8 1
404 43.32 temperature 25.0 270 > th dose independent rect. 23 4
425 43.35 wind 7.0 90 < th dose independent rect. 3 12
432 43.36 wind 9.0 30 < th dose dependent rect. 3 8
437 43.37 radiation 40.0 30 < th dose dependent rect. 3 8
438 43.38 humidity 90.0 10 > th dose independent rect. 24 3
439 43.38 precipitation 0.1 720 < th dose independent rect. 7 8
440 43.38 precipitation 0.1 720 < th dose dependent rect. 7 8
445 43.39 wind 3.0 10 < th dose dependent rect. 22 5
453 43.42 precipitation 0.1 720 < th dose independent rect. 3 1
454 43.42 precipitation 0.1 720 < th dose dependent rect. 3 1
486 43.49 atmosphere 995.0 720 > th dose independent rect. 23 16
496 43.52 humidity 90.0 90 < th dose independent rect. 1 11
505 43.55 temperature 15.0 90 > th dose independent rect. 3 12
510 43.56 atmosphere 1000.0 30 > th dose independent rect. 3 8
522 43.58 temperature 25.0 270 > th dose independent rect. 23 7
523 43.58 humidity 60.0 30 > th dose independent rect. 3 8
534 43.59 temperature 15.0 720 > th dose independent rect. 16 23
541 43.60 wind 7.0 30 < th dose independent rect. 3 8
544 43.60 atmosphere 995.0 90 > th dose independent rect. 3 12
545 43.60 humidity 90.0 90 < th dose independent rect. 1 16
555 43.61 temperature 10.0 30 > th dose independent rect. 3 8
559 43.61 atmosphere 1015.0 30 < th dose independent rect. 3 8
560 43.61 radiation 40.0 30 < th dose independent rect. 3 8
562 43.61 temperature 10.0 30 > th dose independent rect. 11 16
581 43.63 wind 9.0 30 < th dose independent rect. 11 16
587 43.63 radiation 40.0 90 < th dose dependent rect. 15 12
589 43.64 precipitation 0.1 30 < th dose independent rect. 11 16
594 43.64 precipitation 0.1 30 < th dose dependent rect. 11 16
595 43.64 humidity 80.0 30 > th dose dependent rect. 3 23
608 43.66 temperature 15.0 90 > th dose independent rect. 15 12
609 43.66 atmosphere 1015.0 720 < th dose independent rect. 23 16
613 43.66 wind 3.0 10 < th dose dependent rect. 18 9
614 43.66 radiation 40.0 30 < th dose dependent rect. 8 19
622 43.68 temperature 25.0 10 < th dose independent rect. 24 3
627 43.68 humidity 80.0 4320 < th dose dependent rect. 1 1
632 43.68 wind 9.0 30 < th dose dependent rect. 15 12
642 43.70 atmosphere 995.0 720 > th dose independent rect. 7 8
643 43.70 precipitation 0.1 30 < th dose independent rect. 3 8
644 43.70 wind 9.0 90 < th dose independent rect. 15 12
647 43.70 atmosphere 1015.0 90 < th dose independent rect. 3 12
648 43.70 radiation 40.0 90 < th dose independent rect. 15 12
653 43.70 precipitation 0.1 30 < th dose dependent rect. 3 8
658 43.71 radiation 10.0 90 < th dose independent rect. 3 7
659 43.71 temperature 30.0 30 < th dose independent rect. 3 8
674 43.72 temperature 15.0 720 > th dose independent rect. 5 8
677 43.72 atmosphere 1015.0 720 < th dose independent rect. 1 16
678 43.72 atmosphere 1015.0 30 < th dose independent rect. 11 16
703 43.75 temperature 15.0 720 > th dose independent rect. 1 16
712 43.75 humidity 50.0 30 > th dose dependent rect. 3 23
713 43.76 wind 9.0 720 < th dose independent rect. 15 1
714 43.76 humidity 90.0 90 > th dose independent rect. 3 11
721 43.76 wind 9.0 30 < th dose dependent rect. 11 16
724 43.77 precipitation 0.1 720 < th dose independent rect. 15 8
730 43.77 humidity 60.0 10 > th dose dependent rect. 11 1
731 43.77 precipitation 0.1 720 < th dose dependent rect. 15 8
734 43.78 wind 1.0 720 > th dose independent rect. 15 1
752 43.79 temperature 10.0 720 > th dose independent rect. 15 1
755 43.79 atmosphere 1015.0 720 < th dose independent rect. 15 1
756 43.79 precipitation 0.1 720 < th dose independent rect. 15 1
762 43.79 temperature 25.0 270 < th dose independent rect. 23 8
764 43.79 humidity 90.0 90 > th dose independent rect. 3 9
768 43.79 precipitation 0.1 720 < th dose dependent rect. 15 1
779 43.80 temperature 10.0 720 > th dose dependent rect. 3 1
787 43.80 wind 3.0 10 < th dose dependent rect. 7 20
794 43.81 humidity 90.0 270 < th dose independent rect. 23 4
797 43.81 wind 7.0 90 < th dose independent rect. 3 14
801 43.81 humidity 90.0 270 > th dose dependent rect. 8 1
808 43.82 humidity 80.0 10 > th dose independent rect. 3 7
814 43.82 humidity 90.0 270 > th dose independent rect. 23 8
846 43.83 radiation 40.0 720 < th dose independent rect. 15 1
854 43.83 precipitation 0.1 720 < th dose independent rect. 3 12
855 43.83 precipitation 0.1 90 < th dose independent rect. 15 12
856 43.83 wind 7.0 90 < th dose independent rect. 3 16
858 43.83 radiation 20.0 30 < th dose independent rect. 8 19
864 43.83 precipitation 0.1 720 < th dose dependent rect. 3 12
865 43.83 precipitation 0.1 90 < th dose dependent rect. 15 12
867 43.84 radiation 30.0 10 < th dose independent rect. 12 1
870 43.84 temperature 15.0 720 > th dose independent rect. 3 12
874 43.84 wind 9.0 720 < th dose dependent rect. 3 1
875 43.84 temperature 10.0 30 > th dose dependent rect. 3 3
878 43.84 atmosphere 995.0 30 > th dose dependent rect. 3 8
897 43.85 humidity 90.0 270 > th dose independent rect. 21 10
902 43.85 humidity 90.0 90 < th dose independent rect. 23 13
923 43.86 precipitation 0.1 90 < th dose independent rect. 3 12
935 43.86 precipitation 0.1 90 < th dose dependent rect. 3 12
956 43.87 humidity 50.0 30 > th dose dependent rect. 11 16