BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os07g0692800 Os07g0692800|Os07g0692800
         (338 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G40290.1  | chr2:16829030-16830889 REVERSE LENGTH=345          438   e-123
AT5G05470.1  | chr5:1620579-1622214 FORWARD LENGTH=345            409   e-115

>AT2G40290.1 | chr2:16829030-16830889 REVERSE LENGTH=345
          Length = 344

 Score =  438 bits (1127), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 209/309 (67%), Positives = 250/309 (80%), Gaps = 1/309 (0%)

Query: 2   PNLECRMYEAPFPEVETAVMIQVKHLAELGAYVSLLEYNNIEGMXXXXXXXXXXXXXXXX 61
           PNLECRMYEA +PEV+ AVMIQVK++A++GAYVSLLEYNNIEGM                
Sbjct: 6   PNLECRMYEAKYPEVDMAVMIQVKNIADMGAYVSLLEYNNIEGMILFSELSRRRIRSVSS 65

Query: 62  XXKVGRQEPAVVLRVDHDKGYIDLSKRRVSHHDRRTCEDRYSKSKFVHSIMRHLAETLHL 121
             KVGR EP +VLRVD +KGYIDLSKRRVS  D +TCE+RY+KSK VHSIMRH+AETL +
Sbjct: 66  LIKVGRIEPVMVLRVDKEKGYIDLSKRRVSEEDIQTCEERYNKSKLVHSIMRHVAETLSI 125

Query: 122 DLEPLYHRIAWPLYRTYGHAFDAFKLIVADPDAAILDSLTYDLTETGPDDQEVTKTLPAV 181
           DLE LY  I WPLYR +GHAF+AFK++V DPD+ +L  LT ++ E GPD QEVTK +PAV
Sbjct: 126 DLEDLYVNIGWPLYRRHGHAFEAFKILVTDPDS-VLGPLTREIKEVGPDGQEVTKVVPAV 184

Query: 182 TPEIKDALIKNIRRRMTPQPHKIRADIDMKCFQYDGVLHIQEAMRKAEAAGNKDCPVKIK 241
           T E+KDAL+KNIRRRMTPQP KIRADI++KCFQ+DGV+HI+EAM+ AEAAGN+DCPVKIK
Sbjct: 185 TEEVKDALVKNIRRRMTPQPMKIRADIELKCFQFDGVVHIKEAMKNAEAAGNEDCPVKIK 244

Query: 242 LVAAPLYVLTTETLDKHQGISVLNNAIKACGETIEKHKGKLVVKEAPRAVSEREDRLFMD 301
           LVA PLYVLTT+TLDK QGI +LN AI AC ETIE HKGKLVVKE  RAVSER++++  +
Sbjct: 245 LVAPPLYVLTTQTLDKEQGIEILNKAIAACTETIETHKGKLVVKEGARAVSERDEKMLTE 304

Query: 302 DIEKLKIAN 310
            + KL++ N
Sbjct: 305 HMAKLRLDN 313



>AT5G05470.1 | chr5:1620579-1622214 FORWARD LENGTH=345
          Length = 344

 Score =  409 bits (1052), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 197/309 (63%), Positives = 242/309 (78%), Gaps = 1/309 (0%)

Query: 2   PNLECRMYEAPFPEVETAVMIQVKHLAELGAYVSLLEYNNIEGMXXXXXXXXXXXXXXXX 61
           PNLECRMYE+ +P+V+ AVMIQVK +A++GAYVSLLEYNNIEGM                
Sbjct: 6   PNLECRMYESRYPDVDMAVMIQVKTIADMGAYVSLLEYNNIEGMILFSELSRRRIRSISS 65

Query: 62  XXKVGRQEPAVVLRVDHDKGYIDLSKRRVSHHDRRTCEDRYSKSKFVHSIMRHLAETLHL 121
             KVGR EP +VLRVD ++GYIDLSKRRVS  D+  CE+RY+KSK VHSIMRH+AET+ +
Sbjct: 66  LIKVGRTEPVMVLRVDRERGYIDLSKRRVSDEDKEACEERYNKSKLVHSIMRHVAETVGV 125

Query: 122 DLEPLYHRIAWPLYRTYGHAFDAFKLIVADPDAAILDSLTYDLTETGPDDQEVTKTLPAV 181
           DLE LY  I WPLY+ +GHAF+AFK++V DPD+ + D+LT ++ ETGPD  EVTK +PAV
Sbjct: 126 DLEELYVNIGWPLYKKHGHAFEAFKIVVTDPDS-VFDALTREVKETGPDGVEVTKVVPAV 184

Query: 182 TPEIKDALIKNIRRRMTPQPHKIRADIDMKCFQYDGVLHIQEAMRKAEAAGNKDCPVKIK 241
           + E+KDA +K+IRRRMTPQP KIRADI++KCFQ+DGVLHI+EAM+KAEA G  DCPVKIK
Sbjct: 185 SEELKDAFLKDIRRRMTPQPMKIRADIELKCFQFDGVLHIKEAMKKAEAVGTDDCPVKIK 244

Query: 242 LVAAPLYVLTTETLDKHQGISVLNNAIKACGETIEKHKGKLVVKEAPRAVSEREDRLFMD 301
           LVA PLYVLTT T  K +GI  LN AI+AC   IE+HKGKLVVKE  RAVSER+D+L  +
Sbjct: 245 LVAPPLYVLTTHTHYKEKGIVTLNKAIEACITAIEEHKGKLVVKEGARAVSERDDKLLAE 304

Query: 302 DIEKLKIAN 310
            + KL++ N
Sbjct: 305 HMAKLRMDN 313



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.319    0.135    0.395 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 6,307,994
Number of extensions: 239558
Number of successful extensions: 534
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 529
Number of HSP's successfully gapped: 2
Length of query: 338
Length of database: 11,106,569
Length adjustment: 99
Effective length of query: 239
Effective length of database: 8,392,385
Effective search space: 2005780015
Effective search space used: 2005780015
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 112 (47.8 bits)