Os07g0691300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Wound-induced WI12 family protein.
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Os07g0691300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Wound-induced WI12 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 362.4 | 0.894 | 8.3 | -0.755 | 4.17 | 1.91 | 4.13 | 0.0744 | 0.217 | 7.67 | 25.8 | 1446 | -- | -- |
| 362.41 | 0.887 | 8.3 | -0.769 | 4.17 | 1.91 | 4.14 | -- | 0.216 | 7.67 | 25.81 | 1446 | -- | -- |
| 410.76 | 0.944 | 8.3 | -0.713 | 4.19 | 1.95 | -- | -0.00131 | 0.197 | 7.63 | 25.8 | 1453 | -- | -- |
| 410.71 | 0.944 | 8.3 | -0.675 | 4.18 | 1.93 | -- | -- | 0.204 | 7.64 | 25.8 | 1452 | -- | -- |
| 1343.76 | 1.71 | 8.38 | -0.427 | -- | 1.94 | -- | 0.822 | 0.246 | -- | 25.16 | 1408 | -- | -- |
| 531.16 | 1.08 | 8.26 | -0.0878 | 4.19 | -- | 4.25 | -- | 0.371 | 7.51 | -- | -- | -- | -- |
| 581.09 | 1.13 | 8.27 | 0.0114 | 4.2 | -- | -- | -- | 0.364 | 7.49 | -- | -- | -- | -- |
| 1344.4 | 1.71 | 8.41 | -0.644 | -- | 2.03 | -- | -- | 0.199 | -- | 25.3 | 1402 | -- | -- |
| 421.97 | 0.957 | 8.28 | -- | 4.15 | 1.81 | -- | -- | 0.284 | 7.68 | 25.94 | 1446 | -- | -- |
| 1522.53 | 1.82 | 8.37 | 0.0755 | -- | -- | -- | -- | 0.43 | -- | -- | -- | -- | -- |
| 581.1 | 1.13 | 8.27 | -- | 4.2 | -- | -- | -- | 0.362 | 7.49 | -- | -- | -- | -- |
| 1354.42 | 1.71 | 8.4 | -- | -- | 1.89 | -- | -- | 0.295 | -- | 25.4 | 1400 | -- | -- |
| 1522.68 | 1.82 | 8.37 | -- | -- | -- | -- | -- | 0.421 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 346.24 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 15 | 4 |
| 15 | 346.34 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 15 | 8 |
| 17 | 346.35 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 15 | 16 |
| 18 | 346.36 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 15 | 5 |
| 23 | 346.38 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 15 | 13 |
| 44 | 346.97 | temperature | 30.0 | 14400 | > th | dose independent | sin | 13 | NA |
| 60 | 347.19 | temperature | 30.0 | 14400 | < th | dose independent | sin | 13 | NA |
| 86 | 348.33 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 145 | 349.58 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 18 | 1 |
| 266 | 351.41 | temperature | 30.0 | 14400 | > th | dose dependent | rect. | 14 | 5 |
| 295 | 351.80 | temperature | 30.0 | 14400 | > th | dose dependent | sin | 13 | NA |
| 357 | 352.29 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 6 | 14 |
| 358 | 352.29 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 6 | 16 |
| 361 | 352.29 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 2 | 18 |
| 372 | 352.30 | temperature | 30.0 | 14400 | < th | dose independent | no | NA | NA |
| 380 | 352.30 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 3 | 16 |
| 409 | 352.30 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 21 | 23 |
| 411 | 352.31 | temperature | 30.0 | 14400 | > th | dose independent | no | NA | NA |
| 585 | 352.71 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 18 | 23 |
| 797 | 355.09 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 830 | 355.99 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 19 | 2 |
| 853 | 356.21 | wind | 3.0 | 43200 | > th | dose dependent | rect. | 5 | 9 |
| 857 | 356.30 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 19 | 2 |
| 858 | 356.30 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 19 | 2 |
| 938 | 357.45 | temperature | 30.0 | 14400 | > th | dose dependent | no | NA | NA |