Os07g0689800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Heat shock protein DnaJ, N-terminal domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os07g0689800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Heat shock protein DnaJ, N-terminal domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 155.24 | 0.585 | 3.13 | -0.213 | 0.266 | -1.03 | -0.385 | 1.77 | -0.0778 | 3.85 | 50 | 848 | -- | -- |
| 156.45 | 0.583 | 3.11 | -0.145 | 0.288 | -0.62 | -0.452 | -- | -0.0824 | 3.74 | 51 | 847 | -- | -- |
| 155.59 | 0.581 | 3.13 | -0.21 | 0.269 | -1.05 | -- | 1.82 | -0.0771 | 4.39 | 50.03 | 847 | -- | -- |
| 156.32 | 0.582 | 3.1 | -0.131 | 0.272 | -0.506 | -- | -- | -0.0711 | 3.8 | 53 | 976 | -- | -- |
| 159.41 | 0.588 | 3.13 | -0.219 | -- | -1.16 | -- | 2.1 | -0.0625 | -- | 50.02 | 848 | -- | -- |
| 160.34 | 0.594 | 3.12 | -0.0411 | 0.301 | -- | -0.417 | -- | -0.134 | 3.32 | -- | -- | -- | -- |
| 160.85 | 0.594 | 3.12 | -0.0332 | 0.303 | -- | -- | -- | -0.132 | 3.64 | -- | -- | -- | -- |
| 160 | 0.589 | 3.1 | -0.106 | -- | -0.436 | -- | -- | -0.0501 | -- | 57 | 1046 | -- | -- |
| 156.68 | 0.583 | 3.1 | -- | 0.278 | -0.437 | -- | -- | -0.0686 | 3.95 | 53.17 | 981 | -- | -- |
| 165.94 | 0.602 | 3.12 | -0.0205 | -- | -- | -- | -- | -0.123 | -- | -- | -- | -- | -- |
| 160.88 | 0.593 | 3.12 | -- | 0.302 | -- | -- | -- | -0.128 | 3.65 | -- | -- | -- | -- |
| 159.55 | 0.588 | 3.1 | -- | -- | -0.435 | -- | -- | -0.0186 | -- | 61.31 | 1115 | -- | -- |
| 165.95 | 0.601 | 3.12 | -- | -- | -- | -- | -- | -0.121 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 148.84 | humidity | 50 | 1440 | < th | dose independent | rect. | 16 | 1 |
| 2 | 148.91 | humidity | 50 | 1440 | < th | dose dependent | rect. | 16 | 1 |
| 3 | 149.35 | temperature | 30 | 720 | > th | dose dependent | rect. | 18 | 1 |
| 17 | 149.73 | humidity | 90 | 90 | > th | dose dependent | rect. | 3 | 2 |
| 34 | 150.12 | humidity | 70 | 720 | > th | dose independent | rect. | 17 | 7 |
| 35 | 150.42 | humidity | 50 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 37 | 150.89 | humidity | 70 | 720 | < th | dose independent | rect. | 17 | 15 |
| 39 | 150.94 | humidity | 70 | 720 | < th | dose independent | rect. | 17 | 3 |
| 50 | 151.00 | radiation | 1 | 4320 | < th | dose dependent | rect. | 23 | 1 |
| 52 | 151.12 | atmosphere | 995 | 4320 | > th | dose independent | rect. | 8 | 5 |
| 54 | 151.21 | atmosphere | 995 | 4320 | < th | dose dependent | rect. | 14 | 1 |
| 63 | 151.24 | atmosphere | 995 | 4320 | > th | dose independent | rect. | 6 | 7 |
| 78 | 151.49 | atmosphere | 995 | 4320 | < th | dose independent | rect. | 14 | 1 |
| 117 | 151.97 | humidity | 90 | 90 | > th | dose independent | rect. | 3 | 2 |
| 118 | 152.02 | humidity | 70 | 720 | > th | dose independent | rect. | 17 | 15 |
| 119 | 152.10 | atmosphere | 995 | 4320 | > th | dose independent | rect. | 11 | 5 |
| 120 | 152.11 | radiation | 1 | 4320 | < th | dose dependent | rect. | 22 | 5 |
| 133 | 152.21 | humidity | 90 | 10 | > th | dose dependent | rect. | 3 | 3 |
| 171 | 152.46 | atmosphere | 995 | 4320 | > th | dose independent | rect. | 15 | 1 |
| 176 | 152.53 | radiation | 1 | 4320 | < th | dose dependent | rect. | 19 | 8 |
| 180 | 152.57 | wind | 1 | 90 | < th | dose independent | rect. | 4 | 1 |
| 181 | 152.65 | humidity | 70 | 720 | < th | dose dependent | rect. | 19 | 1 |
| 194 | 152.70 | temperature | 25 | 720 | > th | dose dependent | rect. | 21 | 2 |
| 195 | 152.72 | atmosphere | 995 | 4320 | > th | dose independent | rect. | 12 | 1 |
| 224 | 152.78 | atmosphere | 995 | 4320 | > th | dose independent | rect. | 4 | 9 |
| 230 | 152.82 | humidity | 80 | 720 | < th | dose dependent | rect. | 17 | 4 |
| 237 | 152.86 | temperature | 20 | 90 | > th | dose dependent | rect. | 3 | 2 |
| 281 | 152.93 | atmosphere | 995 | 4320 | > th | dose independent | rect. | 24 | 13 |
| 293 | 152.97 | humidity | 70 | 720 | < th | dose dependent | rect. | 18 | 14 |
| 320 | 153.09 | humidity | 70 | 720 | > th | dose independent | sin | 13 | NA |
| 323 | 153.12 | humidity | 70 | 720 | < th | dose independent | sin | 13 | NA |
| 324 | 153.13 | atmosphere | 995 | 4320 | > th | dose independent | rect. | 2 | 12 |
| 332 | 153.18 | atmosphere | 995 | 4320 | > th | dose independent | rect. | 22 | 16 |
| 348 | 153.26 | humidity | 90 | 10 | > th | dose dependent | rect. | 3 | 9 |
| 354 | 153.28 | atmosphere | 995 | 4320 | > th | dose independent | rect. | 11 | 10 |
| 361 | 153.29 | radiation | 1 | 4320 | < th | dose dependent | rect. | 19 | 10 |
| 364 | 153.31 | humidity | 90 | 10 | > th | dose dependent | rect. | 3 | 7 |
| 382 | 153.37 | temperature | 30 | 720 | > th | dose independent | rect. | 18 | 1 |
| 412 | 153.40 | wind | 1 | 90 | < th | dose dependent | rect. | 4 | 1 |
| 424 | 153.46 | temperature | 20 | 90 | > th | dose independent | rect. | 3 | 2 |
| 429 | 153.49 | atmosphere | 995 | 4320 | > th | dose independent | rect. | 19 | 19 |
| 442 | 153.55 | radiation | 1 | 720 | > th | dose independent | rect. | 18 | 1 |
| 465 | 153.58 | humidity | 50 | 720 | > th | dose dependent | rect. | 17 | 7 |
| 501 | 153.70 | wind | 7 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 503 | 153.70 | temperature | 10 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 506 | 153.70 | temperature | 30 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 510 | 153.70 | humidity | 50 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 519 | 153.70 | atmosphere | 995 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 520 | 153.70 | atmosphere | 1015 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 521 | 153.70 | radiation | 20 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 531 | 153.70 | temperature | 10 | 1440 | > th | dose independent | rect. | 6 | 23 |
| 578 | 153.77 | radiation | 1 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 579 | 153.78 | temperature | 10 | 720 | > th | dose dependent | rect. | 17 | 4 |
| 656 | 154.00 | temperature | 25 | 90 | < th | dose independent | rect. | 3 | 2 |
| 666 | 154.05 | temperature | 25 | 10 | < th | dose independent | rect. | 3 | 3 |
| 667 | 154.06 | temperature | 30 | 720 | < th | dose independent | rect. | 17 | 8 |
| 754 | 154.22 | radiation | 1 | 720 | < th | dose dependent | rect. | 17 | 8 |
| 769 | 154.28 | humidity | 90 | 10 | > th | dose independent | rect. | 3 | 3 |
| 794 | 154.31 | wind | 1 | 10 | < th | dose independent | rect. | 4 | 2 |
| 795 | 154.31 | wind | 7 | 4320 | > th | dose dependent | rect. | 5 | 2 |
| 812 | 154.38 | wind | 7 | 4320 | > th | dose independent | rect. | 5 | 2 |
| 831 | 154.43 | radiation | 1 | 720 | < th | dose independent | rect. | 17 | 8 |
| 887 | 154.55 | wind | 3 | 10 | < th | dose dependent | rect. | 3 | 3 |
| 889 | 154.56 | temperature | 30 | 720 | < th | dose independent | rect. | 17 | 15 |
| 912 | 154.63 | temperature | 30 | 720 | < th | dose dependent | rect. | 20 | 3 |
| 915 | 154.64 | temperature | 25 | 1440 | < th | dose independent | rect. | 8 | 1 |
| 940 | 154.66 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 11 | 1 |
| 951 | 154.67 | temperature | 25 | 1440 | > th | dose independent | rect. | 8 | 1 |
| 953 | 154.67 | temperature | 30 | 720 | < th | dose dependent | rect. | 17 | 7 |
| 973 | 154.72 | radiation | 1 | 720 | < th | dose dependent | rect. | 14 | 11 |
| 974 | 154.73 | humidity | 80 | 720 | > th | dose independent | rect. | 21 | 1 |