BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os07g0689800 Os07g0689800|AK071235
(603 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G02650.1 | chr1:568704-570418 FORWARD LENGTH=514 292 4e-79
AT4G02100.1 | chr4:930228-932049 FORWARD LENGTH=547 244 8e-65
AT2G47440.1 | chr2:19469912-19471660 FORWARD LENGTH=527 235 4e-62
AT3G62570.1 | chr3:23142616-23144563 FORWARD LENGTH=553 216 2e-56
AT5G12430.1 | chr5:4028475-4034086 REVERSE LENGTH=1166 72 1e-12
AT2G41520.1 | chr2:17317662-17322705 FORWARD LENGTH=1109 64 2e-10
>AT1G02650.1 | chr1:568704-570418 FORWARD LENGTH=514
Length = 513
Score = 292 bits (747), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 151/342 (44%), Positives = 207/342 (60%), Gaps = 16/342 (4%)
Query: 145 CFDISDLKHRVLAGFSKNTSADTQWRYLVLGQACFHLGLMEDAAALLQTGRRLASAAFRR 204
CF S LK +V+AG S N+ QWRYLVLGQAC+HLGLM+DA LLQTG+RLA+A RR
Sbjct: 118 CFSYSYLKKKVMAGLSNNSQVQGQWRYLVLGQACYHLGLMDDAIILLQTGKRLATAELRR 177
Query: 205 ESVCWSEDSFSPSNLTXXXXXXXXXXXXXXXXXXXXXXXXXXQXXXXXXXXXXXXXXXXX 264
ES+CWSEDSF+ S Q
Sbjct: 178 ESICWSEDSFNLST-------------SESQPQPITESEIVSQMLSQTKLFLRRRTAALA 224
Query: 265 XXXXXXXXXXXRHFSKVLDARRGVLPHPFATACLVGRAEALRSSGRAADAIADCNRALAL 324
RHFSK++D+RRG P F CL+ RA A +S+GR AD+IADCN LAL
Sbjct: 225 ALDAGLYSESIRHFSKIIDSRRGA-PQSFLVYCLIRRAFAYKSAGRIADSIADCNLILAL 283
Query: 325 DPAFIPALRSRADLLESVGALSDCLRDLEHLKLLYDAALRDGKLPGPTWRPQGGVRFSEI 384
+P+ I AL +RA+L S+ D L DLEHLKLL+++ LRD L GP W+ + VR+ EI
Sbjct: 284 EPSCIEALETRAELFRSIRCFPDSLHDLEHLKLLFNSILRDRSLTGPVWK-RHNVRYREI 342
Query: 385 AGAHRALTPRIQQLRGRVAGGEACSVDYYALLGVRRGCTRSELERAHLLLTLKLRPDRCA 444
G LT I+Q++ ++ E + DYY+L+G+ RGC+RSEL RA+LLL L+ + +R
Sbjct: 343 PGKLCVLTTNIKQMKEKITNRENGNEDYYSLMGIERGCSRSELNRAYLLLNLRYKSERSM 402
Query: 445 SFAERLELVDEHRDLEAVRDQARMSALSLYRMLQKGYSFIMS 486
+ +R +++DE ++L +V+++ARMS L LYR++QKGY ++S
Sbjct: 403 TSIDRFDIIDE-QELVSVKNRARMSTLLLYRLIQKGYYAVLS 443
>AT4G02100.1 | chr4:930228-932049 FORWARD LENGTH=547
Length = 546
Score = 244 bits (624), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 120/213 (56%), Positives = 158/213 (74%), Gaps = 2/213 (0%)
Query: 276 RHFSKVLDARRGVLPHPFATACLVGRAEALRSSGRAADAIADCNRALALDPAFIPALRSR 335
RHFSK+LD+RRG P F C + RA A RS+GR A++IADCN+ LALDP+ + AL +R
Sbjct: 259 RHFSKILDSRRGA-PQGFLAQCFMHRASAYRSAGRIAESIADCNKTLALDPSCLQALETR 317
Query: 336 ADLLESVGALSDCLRDLEHLKLLYDAALRDGKLPGPTWRPQGGVRFSEIAGAHRALTPRI 395
A LLESV D L DLEHLKLLY++ LRD KLPGP W+ + VR+ EI G LT +I
Sbjct: 318 AALLESVRCFPDSLHDLEHLKLLYNSILRDRKLPGPVWK-RHNVRYREIPGKLCVLTTKI 376
Query: 396 QQLRGRVAGGEACSVDYYALLGVRRGCTRSELERAHLLLTLKLRPDRCASFAERLELVDE 455
QQL+ ++A GE +VDYYAL+G+RR C+RSEL+RA+LLL LK +P+R SF +R EL D+
Sbjct: 377 QQLKQKIANGEIGNVDYYALMGIRRDCSRSELDRAYLLLNLKHKPERSMSFIDRFELTDD 436
Query: 456 HRDLEAVRDQARMSALSLYRMLQKGYSFIMSVV 488
+L++V+D+ARMS L LYR++QKGYS + S +
Sbjct: 437 EEELDSVKDRARMSTLLLYRLIQKGYSVVTSNI 469
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/163 (43%), Positives = 85/163 (52%), Gaps = 2/163 (1%)
Query: 52 AALGLVEAVLEMSPRMEXXXXXXXXXXXXXXXXXXVADMLRDYIPSCTKPXXXXXXXXXX 111
+AL L+E+ L +SPR E VADML+DYIPS K
Sbjct: 39 SALNLLESALSVSPRYELALELKARSLLYLRRYKDVADMLQDYIPSL-KLAGGGEDSGIG 97
Query: 112 XXXXXXXXXXXXXXXXPXXXXXXXXXXXXXFLCCFDISDLKHRVLAGFSKNTSADTQWRY 171
F C F +SDLK +V+AG +KN QWRY
Sbjct: 98 SSELSFTHSSRESVKLLNDLPSHHHHHDSSFKC-FSVSDLKKKVMAGLTKNCDEQGQWRY 156
Query: 172 LVLGQACFHLGLMEDAAALLQTGRRLASAAFRRESVCWSEDSF 214
LVLGQAC HLGLMEDA LLQTG+RLA+AAFRR+S+CWS+DSF
Sbjct: 157 LVLGQACCHLGLMEDAMVLLQTGKRLATAAFRRQSICWSDDSF 199
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 22/33 (66%), Positives = 30/33 (90%)
Query: 571 QGVFCRDMAVVGTLLSRGGFDRPIPVKCEAMSC 603
+GVFCRD+ VVG+L++R GF++PIPVK EA+SC
Sbjct: 514 KGVFCRDLTVVGSLIARTGFNQPIPVKYEALSC 546
>AT2G47440.1 | chr2:19469912-19471660 FORWARD LENGTH=527
Length = 526
Score = 235 bits (600), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 116/213 (54%), Positives = 157/213 (73%), Gaps = 3/213 (1%)
Query: 276 RHFSKVLDARRGVLPHPFATACLVGRAEALRSSGRAADAIADCNRALALDPAFIPALRSR 335
RHFSK++D RR P F C + RA A RS+GR A+AIADCN+ LAL+P+ I AL +R
Sbjct: 241 RHFSKIVDGRRPA-PQGFLAECYMHRAAAYRSAGRIAEAIADCNKTLALEPSCIQALETR 299
Query: 336 ADLLESVGALSDCLRDLEHLKLLYDAALRDGKLPGPTWRPQGGVRFSEIAGAHRALTPRI 395
A LLE+V D L DLEHLKLLY+ LRD KLPGP W+ + V++ EI G LT +
Sbjct: 300 AALLETVRCFPDSLHDLEHLKLLYNTILRDRKLPGPVWK-RHNVKYREIPGKLCVLTTKT 358
Query: 396 QQLRGRVAGGEACSVDYYALLGVRRGCTRSELERAHLLLTLKLRPDRCASFAERLELVDE 455
Q+L+ ++A GE +VDYY L+GVRRGCTRSEL+RAHLLL L+ +PDR +SF ER E D+
Sbjct: 359 QKLKQKIANGETGNVDYYGLIGVRRGCTRSELDRAHLLLCLRYKPDRASSFIERCEFTDQ 418
Query: 456 HRDLEAVRDQARMSALSLYRMLQKGYSFIMSVV 488
+ D+++VRD+A+MS+L LYR++QKGY+ + +++
Sbjct: 419 N-DVDSVRDRAKMSSLLLYRLIQKGYTAVTAII 450
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 80/161 (49%), Gaps = 14/161 (8%)
Query: 52 AALGLVEAVLEMSPRMEXXXXXXXXXXXXXXXXXXVADMLRDYIPSCTKPXXXXXXXXXX 111
+AL L++A L +SPR+E VADML+DYIPS
Sbjct: 43 SALHLLDAALSISPRLETALELKARSLLFLRRFKDVADMLQDYIPSL--KLDDEGSASSQ 100
Query: 112 XXXXXXXXXXXXXXXXPXXXXXXXXXXXXXFLCCFDISDLKHRVLAGFSKNTSADTQWRY 171
P CF +SDLK +V+AG K + QWRY
Sbjct: 101 GSSSSDGINLLSDASSPGSFK------------CFSVSDLKKKVMAGICKKCDKEGQWRY 148
Query: 172 LVLGQACFHLGLMEDAAALLQTGRRLASAAFRRESVCWSED 212
+VLGQAC HLGLMEDA LLQTG+RLASA FRR S+CWS+D
Sbjct: 149 VVLGQACCHLGLMEDAMVLLQTGKRLASAEFRRRSICWSDD 189
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 24/38 (63%), Positives = 30/38 (78%)
Query: 566 GSPVFQGVFCRDMAVVGTLLSRGGFDRPIPVKCEAMSC 603
S +QGVFCRD+A VG LL+R GF+ PIPVK EA++C
Sbjct: 489 NSNAYQGVFCRDLAAVGNLLTRAGFNHPIPVKYEALTC 526
>AT3G62570.1 | chr3:23142616-23144563 FORWARD LENGTH=553
Length = 552
Score = 216 bits (551), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 107/207 (51%), Positives = 151/207 (72%), Gaps = 2/207 (0%)
Query: 276 RHFSKVLDARRGVLPHPFATACLVGRAEALRSSGRAADAIADCNRALALDPAFIPALRSR 335
RHFSK+LD RR P F C + RA A +S+G+ A+AIADCN+ LAL+P+ I AL +R
Sbjct: 261 RHFSKILDGRRRPAPQGFLADCYMHRAAAYKSAGKIAEAIADCNKTLALEPSCIHALETR 320
Query: 336 ADLLESVGALSDCLRDLEHLKLLYDAALRDGKLPGPTWRPQGGVRFSEIAGAHRALTPRI 395
A LLE+V L D L DLEHLK+LY+ LRD KLPGP W+ + V++ EI G LT +
Sbjct: 321 ATLLETVRCLPDSLHDLEHLKILYNTILRDRKLPGPPWK-RHNVKYREIPGKLCELTTKS 379
Query: 396 QQLRGRVAGGEACSVDYYALLGVRRGCTRSELERAHLLLTLKLRPDRCASFAERLELVDE 455
++L+ ++A GE +VDYY L+GVRRGCTRSEL+RA+LLL L+ +PD+ +F ER + D+
Sbjct: 380 KKLKAKMANGEIGNVDYYGLVGVRRGCTRSELDRANLLLCLRHKPDKALAFMERCDFFDQ 439
Query: 456 HRDLEAVRDQARMSALSLYRMLQKGYS 482
++ +V+D+A+MS+L LYR++Q+GY+
Sbjct: 440 -SEISSVKDRAKMSSLLLYRLIQRGYT 465
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/153 (36%), Positives = 69/153 (45%), Gaps = 4/153 (2%)
Query: 52 AALGLVEAVLEMSPRMEXXXXXXXXXXXXXXXXXXVADMLRDYIPSCTKPXXXXXXXXXX 111
+A+ L++A L +SPR E V DML+DYIPS
Sbjct: 43 SAIHLLDAALSISPRSETALELKARSLLFLRRFKDVVDMLQDYIPS----LKLAVNEEDG 98
Query: 112 XXXXXXXXXXXXXXXXPXXXXXXXXXXXXXFLCCFDISDLKHRVLAGFSKNTSADTQWRY 171
CF +S LK +++AG KN D QWRY
Sbjct: 99 SYSYEGSSYSSSSSQLSRKLLSDSSPRRDSSFKCFSVSYLKKKIMAGICKNRDQDKQWRY 158
Query: 172 LVLGQACFHLGLMEDAAALLQTGRRLASAAFRR 204
+VLGQAC HLGLMEDA LLQTG+RLA+ FRR
Sbjct: 159 VVLGQACCHLGLMEDALVLLQTGKRLATVEFRR 191
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 24/38 (63%), Positives = 32/38 (84%)
Query: 566 GSPVFQGVFCRDMAVVGTLLSRGGFDRPIPVKCEAMSC 603
S +QGVFCRD+A VG+LLSR GF++PIP+K +A+SC
Sbjct: 515 NSNAYQGVFCRDLAAVGSLLSRTGFNQPIPMKYDAISC 552
>AT5G12430.1 | chr5:4028475-4034086 REVERSE LENGTH=1166
Length = 1165
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 92/203 (45%), Gaps = 20/203 (9%)
Query: 287 GVLPHPFATACLVGRAEALRSSGRAADAIADCNRALALDPAFIPALRSRADLLESVGALS 346
V PF C RA A ++ G+ +DAIADC+ A+ALD + A+ RA L E +
Sbjct: 909 NVESRPFTAVCFCNRAAAYKALGQFSDAIADCSLAIALDQNYSKAISRRATLFEMIRDYG 968
Query: 347 DCLRDLEHLKLLYDAALRDGKLPGPTWRPQGGVRFSEIAGAHRALTPRIQQLRGRVAGGE 406
D+E + + + K G R +++ I+Q R R++ E
Sbjct: 969 QAASDMERYVNILTKQMEE-KTSGTLDRST-------------SMSNDIRQARIRLSELE 1014
Query: 407 -----ACSVDYYALLGVRRGCTRSELERAHLLLTLKLRPDRCASFAERLELVDEHRDLEA 461
S+D Y +LGV C+ S++ +A+ LK PD+ R E DE R +
Sbjct: 1015 EKSRKENSLDMYLVLGVVPSCSASDIRKAYRKAALKHHPDKAGQSLTRNETKDE-RLWKE 1073
Query: 462 VRDQARMSALSLYRMLQKGYSFI 484
+ ++ R L++M+ + Y+ +
Sbjct: 1074 IGEEVRKDTDKLFKMIGEAYAVL 1096
>AT2G41520.1 | chr2:17317662-17322705 FORWARD LENGTH=1109
Length = 1108
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 96/204 (47%), Gaps = 20/204 (9%)
Query: 286 RGVLPHPFATACLVGRAEALRSSGRAADAIADCNRALALDPAFIPALRSRADLLESVGAL 345
R V PFA C RA A ++ + ADAIADC+ A+ALD + A+ RA L E +
Sbjct: 861 RNVDSRPFAAICFCNRAAANQALVQIADAIADCSLAMALDENYTKAVSRRATLHEMIRDY 920
Query: 346 SDCLRDLEHLKLLYDAALRDGKLPGPTWRPQGGVRFSEIAGAHRALTPRIQQLRGRVA-- 403
DL+ L + K T P+ V + A + + L +Q R R++
Sbjct: 921 DQAASDLQRLISIL------VKQSDKTKTPETSV---DRASSRKEL----KQARQRLSVM 967
Query: 404 ---GGEACSVDYYALLGVRRGCTRSELERAHLLLTLKLRPDRCASFAERLELVDEHRDLE 460
E +D++ ++GV+ + +++++A+ L+ PD+ A R E E L+
Sbjct: 968 EEKSKEGIHLDFFLIMGVKTSDSAADIKKAYRKAALRHHPDKAAQILVRSE--SEGPWLK 1025
Query: 461 AVRDQARMSALSLYRMLQKGYSFI 484
+ ++ A L++M+ + YS +
Sbjct: 1026 EILEEVHKGADRLFKMIGEAYSVL 1049
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.324 0.136 0.416
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 8,134,515
Number of extensions: 243511
Number of successful extensions: 781
Number of sequences better than 1.0e-05: 6
Number of HSP's gapped: 769
Number of HSP's successfully gapped: 13
Length of query: 603
Length of database: 11,106,569
Length adjustment: 104
Effective length of query: 499
Effective length of database: 8,255,305
Effective search space: 4119397195
Effective search space used: 4119397195
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 115 (48.9 bits)