Os07g0684900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Homeodomain-like containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os07g0684900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Homeodomain-like containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 235.51 | 0.721 | 3.28 | 0.352 | 0.226 | 0.774 | -0.119 | 4.28 | -0.194 | 21.6 | 998.6 | 3212 | -- | -- |
| 240.44 | 0.722 | 3.29 | 0.292 | 0.233 | 0.813 | -0.194 | -- | -0.197 | 21.4 | 999.4 | 1804 | -- | -- |
| 235.27 | 0.714 | 3.28 | 0.359 | 0.224 | 0.968 | -- | 4.88 | -0.201 | 21.8 | 998.2 | 3197 | -- | -- |
| 240.47 | 0.722 | 3.29 | 0.295 | 0.236 | 0.816 | -- | -- | -0.196 | 21.9 | 999.3 | 1710 | -- | -- |
| 238.32 | 0.719 | 3.28 | 0.364 | -- | 0.969 | -- | 5.05 | -0.197 | -- | 998.2 | 3207 | -- | -- |
| 245.32 | 0.734 | 3.29 | 0.351 | 0.231 | -- | -0.118 | -- | -0.221 | 21.7 | -- | -- | -- | -- |
| 245.36 | 0.734 | 3.29 | 0.355 | 0.231 | -- | -- | -- | -0.221 | 22 | -- | -- | -- | -- |
| 243.27 | 0.726 | 3.28 | 0.314 | -- | 0.953 | -- | -- | -0.203 | -- | 998.1 | 1061 | -- | -- |
| 242.74 | 0.726 | 3.29 | -- | 0.237 | 0.871 | -- | -- | -0.225 | 21.9 | 999.5 | 1721 | -- | -- |
| 248.57 | 0.737 | 3.29 | 0.357 | -- | -- | -- | -- | -0.221 | -- | -- | -- | -- | -- |
| 248.68 | 0.738 | 3.3 | -- | 0.232 | -- | -- | -- | -0.261 | 22.1 | -- | -- | -- | -- |
| 245.8 | 0.73 | 3.29 | -- | -- | 0.995 | -- | -- | -0.237 | -- | 998.3 | 1092 | -- | -- |
| 251.93 | 0.741 | 3.3 | -- | -- | -- | -- | -- | -0.261 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 233.32 | wind | 5 | 90 | > th | dose independent | rect. | 2 | 1 |
| 2 | 233.32 | wind | 5 | 90 | > th | dose dependent | rect. | 2 | 1 |
| 3 | 233.55 | atmosphere | 1000 | 90 | < th | dose independent | rect. | 4 | 3 |
| 4 | 233.60 | atmosphere | 1000 | 90 | < th | dose dependent | rect. | 5 | 2 |
| 7 | 234.14 | wind | 5 | 90 | > th | dose dependent | rect. | 12 | 1 |
| 8 | 234.16 | temperature | 25 | 270 | > th | dose independent | rect. | 3 | 2 |
| 9 | 234.23 | atmosphere | 1005 | 90 | < th | dose independent | rect. | 1 | 4 |
| 11 | 234.54 | temperature | 25 | 270 | > th | dose dependent | rect. | 4 | 1 |
| 20 | 234.75 | atmosphere | 1000 | 270 | < th | dose dependent | rect. | 2 | 4 |
| 21 | 234.79 | atmosphere | 1000 | 10 | < th | dose dependent | rect. | 4 | 2 |
| 22 | 234.80 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 4 | 2 |
| 25 | 234.90 | wind | 5 | 90 | > th | dose independent | rect. | 12 | 2 |
| 52 | 235.04 | atmosphere | 1005 | 4320 | > th | dose independent | rect. | 20 | 1 |
| 62 | 235.23 | atmosphere | 1005 | 10 | < th | dose independent | rect. | 2 | 2 |
| 68 | 235.32 | temperature | 30 | 4320 | > th | dose dependent | rect. | 8 | 1 |
| 82 | 235.33 | atmosphere | 1015 | 720 | < th | dose dependent | rect. | 1 | 2 |
| 87 | 235.41 | atmosphere | 995 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 88 | 235.41 | atmosphere | 1015 | 1440 | < th | dose dependent | rect. | 16 | 1 |
| 91 | 235.42 | temperature | 25 | 30 | > th | dose dependent | rect. | 5 | 1 |
| 92 | 235.46 | atmosphere | 1015 | 720 | < th | dose dependent | rect. | 24 | 4 |
| 115 | 235.73 | atmosphere | 1005 | 4320 | > th | dose independent | rect. | 19 | 7 |
| 118 | 235.78 | temperature | 15 | 1440 | > th | dose independent | rect. | 24 | 2 |
| 133 | 235.83 | atmosphere | 1005 | 4320 | < th | dose independent | rect. | 24 | 1 |
| 173 | 236.04 | atmosphere | 1000 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 178 | 236.07 | atmosphere | 1005 | 43200 | > th | dose independent | rect. | 23 | 1 |
| 181 | 236.09 | atmosphere | 1005 | 10 | < th | dose independent | rect. | 1 | 11 |
| 198 | 236.18 | atmosphere | 995 | 720 | > th | dose dependent | rect. | 20 | 11 |
| 210 | 236.24 | wind | 5 | 90 | > th | dose independent | rect. | 2 | 5 |
| 213 | 236.25 | atmosphere | 1005 | 4320 | > th | dose independent | rect. | 24 | 1 |
| 226 | 236.32 | atmosphere | 1015 | 270 | < th | dose dependent | rect. | 24 | 10 |
| 229 | 236.33 | wind | 5 | 90 | > th | dose dependent | rect. | 2 | 5 |
| 237 | 236.37 | atmosphere | 1005 | 4320 | < th | dose independent | rect. | 17 | 9 |
| 244 | 236.39 | atmosphere | 1005 | 4320 | < th | dose independent | rect. | 19 | 7 |
| 257 | 236.44 | humidity | 90 | 270 | > th | dose dependent | rect. | 24 | 1 |
| 265 | 236.48 | atmosphere | 1005 | 4320 | < th | dose independent | rect. | 19 | 3 |
| 283 | 236.54 | temperature | 25 | 30 | > th | dose independent | rect. | 4 | 2 |
| 295 | 236.57 | atmosphere | 1005 | 10 | > th | dose independent | rect. | 22 | 14 |
| 299 | 236.59 | wind | 1 | 720 | > th | dose independent | rect. | 11 | 5 |
| 310 | 236.61 | atmosphere | 1005 | 10 | < th | dose independent | rect. | 1 | 9 |
| 315 | 236.61 | atmosphere | 1015 | 1440 | < th | dose dependent | rect. | 14 | 14 |
| 319 | 236.62 | atmosphere | 995 | 1440 | > th | dose dependent | rect. | 14 | 14 |
| 323 | 236.63 | atmosphere | 1005 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 336 | 236.64 | radiation | 20 | 270 | < th | dose dependent | rect. | 19 | 18 |
| 351 | 236.67 | atmosphere | 1005 | 4320 | < th | dose dependent | rect. | 20 | 6 |
| 372 | 236.72 | atmosphere | 1005 | 90 | < th | dose independent | rect. | 1 | 10 |
| 381 | 236.73 | atmosphere | 1005 | 4320 | < th | dose dependent | rect. | 23 | 3 |
| 454 | 236.82 | radiation | 10 | 270 | < th | dose independent | rect. | 19 | 18 |
| 481 | 236.85 | atmosphere | 1000 | 720 | < th | dose dependent | rect. | 20 | 1 |
| 484 | 236.85 | atmosphere | 1015 | 720 | < th | dose dependent | rect. | 18 | 10 |
| 514 | 236.89 | wind | 1 | 90 | > th | dose independent | rect. | 1 | 22 |
| 561 | 236.93 | temperature | 20 | 90 | < th | dose independent | rect. | 21 | 1 |
| 596 | 236.96 | temperature | 20 | 90 | < th | dose dependent | rect. | 21 | 1 |
| 602 | 236.97 | temperature | 20 | 10 | < th | dose dependent | rect. | 21 | 1 |
| 642 | 237.00 | temperature | 30 | 4320 | > th | dose independent | rect. | 8 | 1 |
| 702 | 237.03 | humidity | 60 | 10 | > th | dose independent | rect. | 22 | 14 |
| 710 | 237.05 | atmosphere | 1005 | 4320 | > th | dose independent | sin | 13 | NA |
| 764 | 237.09 | humidity | 90 | 30 | > th | dose dependent | rect. | 1 | 3 |
| 766 | 237.09 | atmosphere | 995 | 720 | > th | dose dependent | rect. | 20 | 5 |
| 778 | 237.10 | atmosphere | 1000 | 4320 | < th | dose dependent | sin | 13 | NA |
| 797 | 237.12 | atmosphere | 1000 | 4320 | < th | dose independent | rect. | 17 | 1 |
| 812 | 237.13 | temperature | 20 | 720 | > th | dose independent | rect. | 16 | 3 |
| 846 | 237.15 | humidity | 90 | 720 | < th | dose independent | rect. | 2 | 1 |
| 872 | 237.17 | atmosphere | 1000 | 4320 | > th | dose independent | rect. | 17 | 1 |
| 918 | 237.21 | atmosphere | 1015 | 1440 | < th | dose dependent | sin | 16 | NA |
| 947 | 237.23 | atmosphere | 995 | 1440 | > th | dose dependent | sin | 16 | NA |
| 949 | 237.23 | wind | 3 | 270 | < th | dose dependent | rect. | 20 | 1 |
| 952 | 237.23 | atmosphere | 995 | 1440 | > th | dose dependent | rect. | 1 | 2 |
| 963 | 237.24 | wind | 1 | 14400 | < th | dose dependent | rect. | 5 | 1 |