Os07g0679300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Alpha-galactosidase precursor (EC 3.2.1.22) (Melibiase) (Alpha-D- galactoside galactohydrolase).
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Os07g0679300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Alpha-galactosidase precursor (EC 3.2.1.22) (Melibiase) (Alpha-D- galactoside galactohydrolase).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 149.41 | 0.574 | 10.1 | -5.13 | 0.989 | 1.79 | 0.897 | 5.35 | -0.882 | 6.4 | 0.6489 | 5760 | -- | -- |
| 162.77 | 0.594 | 9.94 | -4.29 | 0.902 | 0.734 | 0.816 | -- | -0.657 | 6.34 | 3.925 | 12702 | -- | -- |
| 151.08 | 0.572 | 10.1 | -5.12 | 1.02 | 1.91 | -- | 5.71 | -0.87 | 6.66 | 0.4525 | 5788 | -- | -- |
| 154.85 | 0.58 | 9.92 | -3.92 | 0.975 | 0.937 | -- | -- | -0.545 | 6.97 | 1.572 | 28977 | -- | -- |
| 158.7 | 0.587 | 10.1 | -4.86 | -- | 2.12 | -- | 5.18 | -0.833 | -- | 0.6921 | 6509 | -- | -- |
| 173.89 | 0.618 | 9.99 | -4.51 | 0.98 | -- | 0.843 | -- | -0.877 | 6.57 | -- | -- | -- | -- |
| 175.67 | 0.621 | 9.99 | -4.5 | 0.983 | -- | -- | -- | -0.88 | 6.6 | -- | -- | -- | -- |
| 186.77 | 0.637 | 10 | -3.98 | -- | 1.81 | -- | -- | -0.699 | -- | 2.64 | 5054 | -- | -- |
| 249.6 | 0.736 | 9.66 | -- | 0.972 | 3.35 | -- | -- | 0.545 | 6.45 | 0.003141 | 47520 | -- | -- |
| 226.06 | 0.703 | 10 | -4.47 | -- | -- | -- | -- | -0.86 | -- | -- | -- | -- | -- |
| 708.85 | 1.25 | 9.87 | -- | 0.929 | -- | -- | -- | -0.379 | 6.88 | -- | -- | -- | -- |
| 279.7 | 0.779 | 9.68 | -- | -- | 3.35 | -- | -- | 0.567 | -- | 0.005308 | 46811 | -- | -- |
| 754.09 | 1.28 | 9.89 | -- | -- | -- | -- | -- | -0.363 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 141.78 | temperature | 20 | 270 | > th | dose dependent | rect. | 22 | 17 |
| 4 | 143.27 | wind | 1 | 14400 | < th | dose dependent | rect. | 22 | 8 |
| 16 | 144.97 | wind | 1 | 43200 | < th | dose independent | rect. | 22 | 5 |
| 18 | 145.13 | radiation | 20 | 43200 | > th | dose dependent | rect. | 15 | 2 |
| 32 | 145.16 | humidity | 90 | 14400 | < th | dose independent | rect. | 4 | 2 |
| 33 | 145.17 | wind | 1 | 14400 | < th | dose dependent | rect. | 1 | 5 |
| 35 | 145.26 | wind | 1 | 43200 | < th | dose dependent | rect. | 22 | 1 |
| 54 | 145.32 | humidity | 70 | 43200 | > th | dose independent | rect. | 23 | 9 |
| 55 | 145.35 | wind | 1 | 14400 | < th | dose dependent | rect. | 1 | 3 |
| 59 | 145.50 | radiation | 40 | 43200 | < th | dose dependent | rect. | 15 | 4 |
| 60 | 145.50 | radiation | 40 | 43200 | < th | dose dependent | rect. | 15 | 11 |
| 71 | 145.53 | wind | 1 | 14400 | < th | dose independent | rect. | 22 | 8 |
| 73 | 145.53 | temperature | 20 | 270 | > th | dose dependent | rect. | 8 | 8 |
| 77 | 145.54 | radiation | 40 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 94 | 145.54 | radiation | 40 | 43200 | > th | dose dependent | rect. | 7 | 1 |
| 116 | 145.57 | radiation | 30 | 43200 | < th | dose dependent | rect. | 17 | 1 |
| 130 | 145.60 | humidity | 70 | 43200 | > th | dose independent | rect. | 7 | 1 |
| 134 | 145.67 | radiation | 10 | 43200 | < th | dose dependent | rect. | 16 | 3 |
| 135 | 145.67 | radiation | 1 | 43200 | > th | dose dependent | rect. | 15 | 4 |
| 145 | 145.67 | radiation | 10 | 43200 | < th | dose dependent | rect. | 16 | 12 |
| 149 | 145.68 | radiation | 10 | 43200 | < th | dose dependent | rect. | 16 | 9 |
| 155 | 145.70 | wind | 1 | 43200 | < th | dose independent | rect. | 22 | 1 |
| 285 | 146.03 | humidity | 70 | 43200 | < th | dose independent | rect. | 22 | 10 |
| 335 | 146.20 | wind | 1 | 43200 | < th | dose independent | rect. | 20 | 7 |
| 364 | 146.34 | wind | 1 | 43200 | > th | dose independent | rect. | 22 | 5 |
| 365 | 146.39 | humidity | 70 | 43200 | < th | dose dependent | rect. | 22 | 11 |
| 366 | 146.42 | humidity | 70 | 43200 | < th | dose independent | rect. | 7 | 1 |
| 388 | 146.55 | wind | 1 | 43200 | > th | dose independent | rect. | 22 | 1 |
| 400 | 146.69 | radiation | 30 | 43200 | < th | dose independent | rect. | 15 | 3 |
| 401 | 146.69 | radiation | 30 | 43200 | < th | dose independent | rect. | 15 | 12 |
| 403 | 146.69 | radiation | 30 | 43200 | < th | dose independent | rect. | 15 | 15 |
| 406 | 146.70 | radiation | 30 | 43200 | < th | dose independent | rect. | 15 | 10 |
| 408 | 146.70 | humidity | 60 | 43200 | < th | dose independent | rect. | 20 | 14 |
| 421 | 146.74 | wind | 1 | 43200 | < th | dose dependent | sin | 13 | NA |
| 425 | 146.76 | wind | 1 | 43200 | < th | dose dependent | rect. | 17 | 12 |
| 431 | 146.81 | radiation | 10 | 43200 | < th | dose dependent | sin | 13 | NA |
| 445 | 146.88 | humidity | 60 | 43200 | > th | dose independent | rect. | 20 | 14 |
| 449 | 146.90 | humidity | 60 | 43200 | < th | dose independent | rect. | 21 | 12 |
| 453 | 146.93 | wind | 1 | 43200 | < th | dose independent | rect. | 17 | 12 |
| 456 | 146.95 | wind | 1 | 43200 | > th | dose independent | rect. | 20 | 7 |
| 468 | 147.00 | temperature | 10 | 270 | > th | dose dependent | rect. | 19 | 22 |
| 511 | 147.18 | temperature | 20 | 270 | > th | dose dependent | sin | 4 | NA |
| 516 | 147.20 | temperature | 25 | 30 | > th | dose dependent | rect. | 10 | 8 |
| 538 | 147.29 | wind | 1 | 43200 | > th | dose independent | rect. | 18 | 10 |
| 589 | 147.37 | humidity | 70 | 43200 | < th | dose dependent | rect. | 7 | 2 |
| 615 | 147.42 | temperature | 25 | 270 | > th | dose independent | rect. | 23 | 16 |
| 667 | 147.53 | temperature | 20 | 14400 | < th | dose dependent | rect. | 23 | 1 |
| 668 | 147.53 | temperature | 20 | 14400 | < th | dose dependent | rect. | 22 | 3 |
| 699 | 147.58 | wind | 1 | 43200 | > th | dose independent | rect. | 20 | 3 |
| 731 | 147.66 | temperature | 20 | 14400 | < th | dose dependent | rect. | 16 | 17 |
| 732 | 147.66 | temperature | 20 | 14400 | < th | dose dependent | rect. | 17 | 19 |
| 755 | 147.70 | temperature | 20 | 14400 | < th | dose dependent | rect. | 17 | 11 |
| 763 | 147.70 | temperature | 20 | 14400 | < th | dose dependent | rect. | 5 | 23 |
| 771 | 147.71 | temperature | 20 | 14400 | < th | dose dependent | rect. | 22 | 22 |
| 776 | 147.72 | temperature | 25 | 270 | > th | dose independent | rect. | 8 | 8 |
| 802 | 147.75 | humidity | 90 | 43200 | > th | dose dependent | rect. | 3 | 1 |
| 805 | 147.75 | temperature | 20 | 14400 | < th | dose dependent | rect. | 11 | 21 |
| 822 | 147.77 | temperature | 20 | 14400 | < th | dose dependent | sin | 13 | NA |
| 831 | 147.78 | temperature | 20 | 14400 | < th | dose dependent | no | NA | NA |
| 849 | 147.80 | temperature | 20 | 14400 | < th | dose dependent | rect. | 2 | 23 |
| 922 | 147.88 | humidity | 90 | 43200 | > th | dose independent | rect. | 24 | 1 |
| 946 | 147.92 | temperature | 20 | 14400 | < th | dose dependent | rect. | 6 | 2 |
| 947 | 147.92 | humidity | 90 | 43200 | > th | dose dependent | rect. | 1 | 3 |