Os07g0675000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Acyl-CoA dehydrogenase, type1/2, C-terminal domain containing protein.
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Os07g0675000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Acyl-CoA dehydrogenase, type1/2, C-terminal domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 56.14 | 0.352 | 10.8 | 0.437 | 1.45 | 0.666 | 0.129 | 0.0972 | 0.63 | 21.4 | 71 | 1259 | -- | -- |
| 56.15 | 0.349 | 10.8 | 0.451 | 1.45 | 0.671 | 0.114 | -- | 0.634 | 21.4 | 71.32 | 1249 | -- | -- |
| 56.11 | 0.349 | 10.8 | 0.424 | 1.45 | 0.675 | -- | 0.132 | 0.617 | 21.4 | 72.13 | 1260 | -- | -- |
| 55.93 | 0.348 | 10.8 | 0.437 | 1.44 | 0.69 | -- | -- | 0.628 | 21.4 | 73.29 | 1274 | -- | -- |
| 164.82 | 0.601 | 10.8 | 0.352 | -- | 0.402 | -- | -0.0844 | 0.54 | -- | 74 | 2959 | -- | -- |
| 72.11 | 0.398 | 10.9 | 0.311 | 1.38 | -- | -0.000561 | -- | 0.535 | 21.1 | -- | -- | -- | -- |
| 72.11 | 0.398 | 10.9 | 0.311 | 1.38 | -- | -- | -- | 0.535 | 21.1 | -- | -- | -- | -- |
| 164.63 | 0.6 | 10.8 | 0.347 | -- | 0.414 | -- | -- | 0.531 | -- | 73.29 | 1274 | -- | -- |
| 60.85 | 0.363 | 10.9 | -- | 1.43 | 0.641 | -- | -- | 0.57 | 21.4 | 73.55 | 1281 | -- | -- |
| 181.99 | 0.63 | 10.8 | 0.314 | -- | -- | -- | -- | 0.527 | -- | -- | -- | -- | -- |
| 74.66 | 0.404 | 10.9 | -- | 1.38 | -- | -- | -- | 0.5 | 21.1 | -- | -- | -- | -- |
| 167.81 | 0.605 | 10.8 | -- | -- | 0.407 | -- | -- | 0.492 | -- | 73.29 | 1274 | -- | -- |
| 184.59 | 0.634 | 10.8 | -- | -- | -- | -- | -- | 0.492 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 51.70 | humidity | 80 | 1440 | < th | dose independent | rect. | 6 | 8 |
| 3 | 52.06 | humidity | 80 | 1440 | > th | dose independent | rect. | 6 | 8 |
| 26 | 52.95 | humidity | 90 | 1440 | < th | dose dependent | rect. | 2 | 11 |
| 50 | 53.41 | humidity | 50 | 1440 | > th | dose dependent | rect. | 3 | 11 |
| 70 | 53.67 | humidity | 90 | 1440 | < th | dose dependent | sin | 4 | NA |
| 79 | 53.77 | humidity | 80 | 1440 | < th | dose independent | sin | 4 | NA |
| 103 | 53.96 | humidity | 80 | 1440 | > th | dose independent | sin | 3 | NA |
| 126 | 54.13 | humidity | 50 | 1440 | > th | dose dependent | sin | 3 | NA |
| 128 | 54.15 | humidity | 80 | 1440 | < th | dose dependent | sin | 7 | NA |
| 142 | 54.27 | humidity | 80 | 1440 | < th | dose dependent | rect. | 20 | 16 |
| 159 | 54.37 | humidity | 60 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 258 | 54.87 | humidity | 70 | 1440 | > th | dose independent | rect. | 19 | 18 |
| 323 | 55.18 | humidity | 70 | 1440 | > th | dose independent | rect. | 9 | 4 |
| 356 | 55.29 | humidity | 90 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 394 | 55.45 | humidity | 70 | 1440 | < th | dose independent | rect. | 18 | 19 |
| 494 | 55.82 | humidity | 70 | 1440 | > th | dose independent | sin | 8 | NA |
| 522 | 55.86 | humidity | 70 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 684 | 56.32 | humidity | 70 | 1440 | < th | dose independent | sin | 9 | NA |
| 936 | 56.76 | humidity | 80 | 1440 | < th | dose dependent | rect. | 6 | 22 |
| 942 | 56.77 | humidity | 80 | 1440 | < th | dose dependent | no | NA | NA |
| 950 | 56.77 | humidity | 80 | 1440 | < th | dose dependent | rect. | 6 | 20 |