BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os07g0675000 Os07g0675000|AK073523
         (831 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G06810.1  | chr3:2146534-2150654 FORWARD LENGTH=825           1151   0.0  
AT3G45300.1  | chr3:16621659-16624848 REVERSE LENGTH=410           84   3e-16

>AT3G06810.1 | chr3:2146534-2150654 FORWARD LENGTH=825
          Length = 824

 Score = 1151 bits (2977), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 560/828 (67%), Positives = 650/828 (78%), Gaps = 12/828 (1%)

Query: 3   TSGLLRPVDDAHAIDEAALLRYAAEHVAGFPSPARGLALTQFGHGQSNPTYCIEASAPGG 62
           T  L+  +  AH  D  AL R+AA++V+GFP+      ++QFGHGQSNPT+ IE  + G 
Sbjct: 5   TGDLVTRIQSAHRFDHDALFRFAADNVSGFPTNPSQFKVSQFGHGQSNPTFLIEVGS-GS 63

Query: 63  VTARYVLRKKPPGAILQSAHAVEREFQVLKALGTYTDVPVPKVFCLCTDASVIGTPFYIM 122
              RYVLRKKPPG +LQSAHAV+REFQVL+ALG +T VPVPKVFCLCTD +VIGT FYIM
Sbjct: 64  SLKRYVLRKKPPGKLLQSAHAVDREFQVLRALGEHTQVPVPKVFCLCTDPAVIGTAFYIM 123

Query: 123 EHLEGLIYPDNKLTGVTPTKRKTIYLAAAETLAAIHKVDVTAIGLQKYGRRDNYCKRQVE 182
           E +EG I+ D KL  V P +R  IY A A+ LA++H  DV AIGL+KYGRR NYCKRQ++
Sbjct: 124 EFMEGRIFIDPKLPNVAPERRNAIYRATAKALASLHSADVDAIGLEKYGRRGNYCKRQID 183

Query: 183 RWGRQYLSSTGEGKPARYQKMLDLAHWLKEHIPKEDSSAGFGTGLVHGDYRVDNLVFHPT 242
           RW +QYL+ST EGKP R  KM +L  WL+++IP EDS+ G  +GLVHGD+R+DNLVFHP+
Sbjct: 184 RWFKQYLASTSEGKPERNPKMFELVDWLRKNIPAEDST-GATSGLVHGDFRIDNLVFHPS 242

Query: 243 EDRVIGVLDWELSTLGNQMCDVAYSSLPYIIDATTSTGYSYGGFEYTGIPDGIPPLEEYL 302
           EDRVIG++DWELSTLGNQMCDVAYS + YI++      +   GFE TG+P+G+  + E+L
Sbjct: 243 EDRVIGIIDWELSTLGNQMCDVAYSCMHYIVNVQLDKEHVSEGFETTGLPEGMLSMPEFL 302

Query: 303 AAYCSISARPWPAASWKFYVAFSLFRGASIYAGVYHRWTMGNASGGERARFSGKIANAMV 362
             YCS S +PWPAA+WKFYVAFSLFR ASIY GVY RW MGNAS GERAR +G  AN +V
Sbjct: 303 LEYCSASGKPWPAANWKFYVAFSLFRAASIYTGVYSRWLMGNASAGERARNTGVQANELV 362

Query: 363 DRAWDIINRENVLREQPARGMHASNGPSQEFQRKHEGSISTKDQGKFVPSEKVMQLRNKL 422
           + A   I RENVL E P          S  ++   +GS      G+F+P+ KV++LR KL
Sbjct: 363 ESALGYIARENVLPEHPPS---VQRDVSPSYESLVDGS------GRFIPNRKVLELRQKL 413

Query: 423 MKFMEDYIYPMESEFYKRAHSTSRWTIHPXXXXXXXXXXREGLWNLFIPLDSAARARELL 482
           +KFME +IYPME+EF K A S  RWT+HP          REGLWNLF+P+DSAARAR  L
Sbjct: 414 IKFMETHIYPMENEFSKLAQSDMRWTVHPQEEKLKEMAKREGLWNLFVPVDSAARARREL 473

Query: 483 FE-DMXXXXXXXXXXXXXXXXXTNLEYGYLCEIMGRSIWAPQIFNCGPPDTGNMEVLLRY 541
              +                  TNLEYGYLCEIMGRS+WAPQ+FNCG PDTGNMEV+LRY
Sbjct: 474 AATENKHNLSGKSFDQLFGEGLTNLEYGYLCEIMGRSVWAPQVFNCGAPDTGNMEVILRY 533

Query: 542 GTKEQQKQWLVPLLEGKIRSGFAMTEPQVASSDATNIECSISRQGDFYVINGTKWWTSGA 601
           G KEQ  +WL+PLLEG+IRSGFAMTEPQVASSDATNIECSI RQGD YVINGTKWWTSGA
Sbjct: 534 GNKEQISEWLIPLLEGRIRSGFAMTEPQVASSDATNIECSIRRQGDSYVINGTKWWTSGA 593

Query: 602 MDPRCQILVLMGKTDFSAPKHKQQSMILVDVKTPGVQIRRPLLVFGFDDAPHGHAEITFE 661
           MDPRC++L+LMGKTDF+APKHKQQSMILVD++TPG+ ++RPL VFGFDDAPHGHAEI+FE
Sbjct: 594 MDPRCRVLILMGKTDFNAPKHKQQSMILVDMRTPGISVKRPLTVFGFDDAPHGHAEISFE 653

Query: 662 NVRVPATNILLGEGRGFEIAQGRLGPGRLHHCMRLIGAAERGMNLMVERALSRTTFGKKI 721
           NV VPA NILLGEGRGFEIAQGRLGPGRLHHCMRLIGAAERGM LM +RALSR TFGK I
Sbjct: 654 NVVVPAKNILLGEGRGFEIAQGRLGPGRLHHCMRLIGAAERGMELMAQRALSRKTFGKFI 713

Query: 722 AQHGSFLADLAKCRVELEQARLLVLEAADQLDRHGNKKARGILAMAKVAAPNMALKVLDM 781
           AQHGSF++DLAK RVELE  RLLVLEAAD LD+ GNKKARGILAMAKVAAPNMALKVLD 
Sbjct: 714 AQHGSFVSDLAKLRVELEGTRLLVLEAADHLDKFGNKKARGILAMAKVAAPNMALKVLDT 773

Query: 782 AMQVHGGAGLSSDTVLSHLWATARTLRIADGPDEVHLGTIAKLELQRA 829
           A+QVHG AG+SSDTVL+HLWATARTLRIADGPDEVHLGTI KLELQRA
Sbjct: 774 AIQVHGAAGVSSDTVLAHLWATARTLRIADGPDEVHLGTIGKLELQRA 821



>AT3G45300.1 | chr3:16621659-16624848 REVERSE LENGTH=410
          Length = 409

 Score = 84.0 bits (206), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 73/282 (25%), Positives = 119/282 (42%), Gaps = 12/282 (4%)

Query: 538 LLRYGTKEQQKQWLVPLLEGKIRSGFAMTEPQVASSDATNIECSISRQGDFYVINGTKWW 597
           L+R GT  Q++++L  L+ G+     AM+EP  A SD   ++C   +    Y++NG K W
Sbjct: 126 LVRNGTAAQKEKYLPKLISGEHVGALAMSEPN-AGSDVVGMKCKAEKVDGGYILNGNKMW 184

Query: 598 TSGAMDPRCQILVLMGKTDFSAPKHKQQSMILVDVKTPGVQIRRPLLVFGFDDAPHGHAE 657
            +    P  + LV+  KTD  A   K  +  +++    G    + L   G   +     E
Sbjct: 185 CTNG--PSAETLVVYAKTDTKAGS-KGITAFIIEKGMTGFSTAQKLDKLGMRGSDT--CE 239

Query: 658 ITFENVRVPATNILLGEGRGFEIAQGRLGPGRLHHCMRLIGAAERGMNLMVERALSRTTF 717
           + FEN  VP  NIL  EG+G  +    L   RL      +G  +  ++ ++     R  F
Sbjct: 240 LVFENCFVPEENILDKEGKGVYVLMSGLDLERLVLAAGPLGIMQACLDNVLPYIRQREQF 299

Query: 718 GKKIAQHGSFLADLAKCRVELEQARLLVLEAADQLD--RHGNKKARGILAMAKVAAPNMA 775
           G+ + +       +A     L+ +R  V   A   D  +   K   G +  A   A  +A
Sbjct: 300 GRPVGEFQFIQGKVADMYTALQSSRSYVYSVARDCDNGKVDPKDCAGTILCAAERATQVA 359

Query: 776 LKVLDMAMQVHGGAGLSSDTVLSHLWATARTLRIADGPDEVH 817
           L+    A+Q  GG G  ++     L   A+   I  G  E+ 
Sbjct: 360 LQ----AIQCLGGNGYINEYATGRLLRDAKLYEIGAGTSEIR 397



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.320    0.136    0.417 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 18,051,062
Number of extensions: 774303
Number of successful extensions: 1444
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 1439
Number of HSP's successfully gapped: 2
Length of query: 831
Length of database: 11,106,569
Length adjustment: 107
Effective length of query: 724
Effective length of database: 8,173,057
Effective search space: 5917293268
Effective search space used: 5917293268
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 116 (49.3 bits)