Os07g0668800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os07g0668800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 32.94 | 0.27 | 8.09 | 0.361 | 0.699 | -0.357 | -0.00374 | -0.805 | 0.128 | 11.8 | 69 | 3541 | -- | -- |
| 33.68 | 0.27 | 8.08 | 0.426 | 0.702 | -0.373 | -0.00925 | -- | 0.156 | 11.5 | 72 | 2735 | -- | -- |
| 32.94 | 0.267 | 8.09 | 0.361 | 0.699 | -0.357 | -- | -0.805 | 0.128 | 11.8 | 69 | 3540 | -- | -- |
| 33.62 | 0.27 | 8.08 | 0.446 | 0.704 | -0.357 | -- | -- | 0.155 | 11.4 | 70 | 2743 | -- | -- |
| 55.14 | 0.346 | 8.1 | 0.419 | -- | -0.957 | -- | 0.119 | 0.146 | -- | 78.3 | 2381 | -- | -- |
| 37.41 | 0.287 | 8.09 | 0.394 | 0.738 | -- | 0.0679 | -- | 0.11 | 11.6 | -- | -- | -- | -- |
| 37.43 | 0.287 | 8.09 | 0.397 | 0.738 | -- | -- | -- | 0.111 | 11.6 | -- | -- | -- | -- |
| 55.17 | 0.346 | 8.09 | 0.393 | -- | -0.93 | -- | -- | 0.158 | -- | 78.57 | 2390 | -- | -- |
| 38.65 | 0.29 | 8.07 | -- | 0.738 | -0.427 | -- | -- | 0.181 | 11.4 | 71 | 4311 | -- | -- |
| 71.65 | 0.396 | 8.11 | 0.377 | -- | -- | -- | -- | 0.102 | -- | -- | -- | -- | -- |
| 41.59 | 0.302 | 8.1 | -- | 0.734 | -- | -- | -- | 0.0665 | 11.5 | -- | -- | -- | -- |
| 59.24 | 0.358 | 8.1 | -- | -- | -0.921 | -- | -- | 0.114 | -- | 78.12 | 2390 | -- | -- |
| 75.4 | 0.405 | 8.12 | -- | -- | -- | -- | -- | 0.0606 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 32.05 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 4 | 3 |
| 2 | 32.08 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 23 | 8 |
| 6 | 32.28 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 22 | 32.43 | wind | 1.0 | 43200 | > th | dose independent | rect. | 1 | 12 |
| 30 | 32.50 | wind | 1.0 | 43200 | > th | dose independent | rect. | 3 | 10 |
| 34 | 32.56 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 14 | 2 |
| 36 | 32.56 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 14 | 2 |
| 37 | 32.57 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 39 | 32.57 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 40 | 32.57 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 15 | 1 |
| 41 | 32.58 | wind | 1.0 | 43200 | < th | dose independent | rect. | 1 | 12 |
| 54 | 32.62 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 3 | 10 |
| 57 | 32.63 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 1 | 12 |
| 58 | 32.64 | wind | 3.0 | 43200 | < th | dose independent | rect. | 5 | 2 |
| 66 | 32.66 | wind | 1.0 | 43200 | > th | dose independent | sin | 8 | NA |
| 68 | 32.67 | wind | 1.0 | 43200 | > th | dose independent | rect. | 23 | 10 |
| 69 | 32.67 | wind | 1.0 | 43200 | < th | dose independent | rect. | 3 | 10 |
| 89 | 32.72 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 18 | 19 |
| 94 | 32.73 | wind | 3.0 | 43200 | > th | dose independent | rect. | 5 | 2 |
| 95 | 32.73 | wind | 1.0 | 43200 | > th | dose independent | rect. | 23 | 8 |
| 100 | 32.74 | wind | 1.0 | 43200 | < th | dose independent | rect. | 23 | 6 |
| 120 | 32.78 | humidity | 80.0 | 4320 | < th | dose dependent | rect. | 18 | 17 |
| 125 | 32.79 | wind | 1.0 | 43200 | < th | dose dependent | sin | 7 | NA |
| 126 | 32.80 | wind | 1.0 | 43200 | < th | dose independent | sin | 8 | NA |
| 141 | 32.82 | wind | 1.0 | 43200 | > th | dose independent | rect. | 23 | 6 |
| 152 | 32.83 | wind | 1.0 | 43200 | < th | dose independent | rect. | 23 | 8 |
| 157 | 32.84 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 19 | 17 |
| 158 | 32.84 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 18 | 19 |
| 163 | 32.85 | wind | 3.0 | 14400 | < th | dose independent | rect. | 24 | 1 |
| 173 | 32.86 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 8 | 4 |
| 178 | 32.86 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 23 | 8 |
| 182 | 32.87 | wind | 9.0 | 14400 | < th | dose independent | rect. | 9 | 2 |
| 208 | 32.90 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 8 | 1 |
| 216 | 32.91 | wind | 1.0 | 43200 | < th | dose independent | rect. | 19 | 12 |
| 226 | 32.92 | wind | 1.0 | 43200 | > th | dose independent | rect. | 19 | 15 |
| 232 | 32.92 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 8 | 4 |
| 235 | 32.93 | wind | 9.0 | 14400 | < th | dose independent | rect. | 7 | 4 |
| 236 | 32.93 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 6 | 6 |
| 243 | 32.93 | wind | 1.0 | 43200 | > th | dose independent | rect. | 19 | 12 |
| 250 | 32.94 | humidity | 70.0 | 1440 | > th | dose independent | sin | 8 | NA |
| 268 | 32.95 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 7 | 10 |
| 282 | 32.96 | wind | 3.0 | 43200 | < th | dose independent | rect. | 1 | 6 |
| 286 | 32.96 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 7 | 10 |
| 297 | 32.96 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 7 | 10 |
| 300 | 32.97 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 10 | 3 |
| 314 | 32.97 | wind | 1.0 | 43200 | < th | dose independent | rect. | 19 | 16 |
| 333 | 32.99 | wind | 3.0 | 14400 | > th | dose independent | rect. | 24 | 1 |
| 334 | 32.99 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 11 | 1 |
| 361 | 33.01 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 16 | 20 |
| 362 | 33.01 | humidity | 80.0 | 4320 | < th | dose dependent | sin | 9 | NA |
| 374 | 33.02 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 24 | 4 |
| 411 | 33.05 | wind | 1.0 | 14400 | > th | dose dependent | rect. | 24 | 1 |
| 426 | 33.06 | wind | 3.0 | 43200 | > th | dose independent | rect. | 1 | 6 |
| 455 | 33.08 | wind | 3.0 | 14400 | < th | dose independent | rect. | 24 | 4 |
| 466 | 33.08 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 6 | 11 |
| 487 | 33.10 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 6 | 7 |
| 509 | 33.11 | humidity | 70.0 | 4320 | > th | dose independent | rect. | 10 | 2 |
| 573 | 33.14 | humidity | 70.0 | 1440 | < th | dose independent | sin | 8 | NA |
| 586 | 33.14 | humidity | 70.0 | 4320 | < th | dose independent | rect. | 15 | 22 |
| 603 | 33.15 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 1 | 16 |
| 635 | 33.16 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 1 | 16 |
| 652 | 33.16 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 1 | 16 |
| 812 | 33.23 | temperature | 20.0 | 270 | > th | dose independent | rect. | 11 | 14 |
| 835 | 33.24 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 19 | 1 |
| 844 | 33.25 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 845 | 33.25 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 19 | 1 |
| 861 | 33.25 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 19 | 1 |
| 873 | 33.26 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 19 | 1 |
| 886 | 33.26 | humidity | 80.0 | 4320 | < th | dose dependent | rect. | 18 | 6 |
| 893 | 33.27 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 906 | 33.27 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 918 | 33.27 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 16 | 16 |
| 970 | 33.29 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 8 | 2 |
| 987 | 33.30 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 7 | 4 |