BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os07g0668800 Os07g0668800|AK103292
         (439 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G05675.2  | chr3:1658425-1659859 REVERSE LENGTH=442            388   e-108
AT4G10800.1  | chr4:6643678-6644529 FORWARD LENGTH=284            158   6e-39
AT1G63850.1  | chr1:23696962-23698708 FORWARD LENGTH=549           65   9e-11
AT3G50780.1  | chr3:18875662-18877341 REVERSE LENGTH=521           51   1e-06

>AT3G05675.2 | chr3:1658425-1659859 REVERSE LENGTH=442
          Length = 441

 Score =  388 bits (996), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 208/437 (47%), Positives = 287/437 (65%), Gaps = 19/437 (4%)

Query: 5   RRAAGRPKIGDLATSDVVVRLRTPEGRDEWLYCHSGVLAAGSRYFADRLSDDWPTCQILG 64
            +A      GD ++SD+VVRLR  EGRD+W+YCHS +L+  S+YFADRLSD WPTC+IL 
Sbjct: 6   NQAEASYTFGDRSSSDIVVRLRNEEGRDDWIYCHSKILSEKSQYFADRLSDKWPTCKILD 65

Query: 65  SRYCVEVHCQELDLSPHVTALRLLYAA-----EPCSRFGVRGALGVLQAAAHLACPRVAA 119
           SRYCVEV CQE D   H+  LRLLY       E      V+ ALG+L  A  L+CP++  
Sbjct: 66  SRYCVEVICQESDYDHHINLLRLLYVVSDDVHEDNLCHNVKSALGILSVAKELSCPQIVT 125

Query: 120 ACVDYLESAPWDEADEEEILRTIPCLGPQYECVLARLRPIDPAPVAGILLSAFRHATSTR 179
           ACV+YLE+ PW+E +EEEILR +P +G + E +LARL+P+D + V  I +SAFR ATS  
Sbjct: 126 ACVNYLEAVPWEEGEEEEILRIVPRIGSEAEPILARLQPVDQSAVLEIFVSAFRFATS-- 183

Query: 180 SPP---QELKSAAQEQLEYMLTEXXXXXXXXXXXXIVRSQVKDCVAALLSRFSGFTSSIL 236
           SPP    ++KS+AQEQ+EYM+TE             V+ +VK CV +L  RF      I 
Sbjct: 184 SPPLLLGDIKSSAQEQIEYMITEDDDAPLLIADEE-VKLEVKQCVKSLFVRFFQCLEEIT 242

Query: 237 MEQGEAPLGHGDAEVQQELHSLVSDISWVCQILSKLEMMKCVVVYWIGVSSDVVEAVDK- 295
           ++  E+ + +     +     ++SD+ WV QIL+K+E+++  V+ W  +S  +V+ V++ 
Sbjct: 243 LKPVESEVINKKGSFRM----VLSDMCWVFQILTKMEVVRDFVITWADISEKLVKVVEQL 298

Query: 296 ACGGISCLKTRLKVIEVSAKVLEAIAFGNIVLPTEKRCDAVNVWIGFARRTKPLVGHPEH 355
               +  ++ R+KVIEV+AKV+EAI +G ++LPT KR   V +W+ F R TKPLV  P  
Sbjct: 299 ETTVVEAVEIRVKVIEVTAKVIEAIGYGTVILPTAKRLQMVKLWLPFVRNTKPLVDSPVR 358

Query: 356 DDDDGDAEAPKINLDSEVWQSLESAIVSIVLTLPSNSQADILSDWLQSKHAKYPDLTEAF 415
           +D++ D    KI  D E+WQ+LES+ VSI+L LPS  QA+IL++WL SK+  YPDLTEAF
Sbjct: 359 EDEENDTVRYKI--DGEIWQALESSFVSIILALPSADQAEILTEWL-SKNGLYPDLTEAF 415

Query: 416 EVWCYRSKAAKRRLSFL 432
           EVWCYRSK AKRRL  +
Sbjct: 416 EVWCYRSKVAKRRLGLV 432



>AT4G10800.1 | chr4:6643678-6644529 FORWARD LENGTH=284
          Length = 283

 Score =  158 bits (399), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 96/276 (34%), Positives = 157/276 (56%), Gaps = 32/276 (11%)

Query: 166 GILLSAFRHATST---RSPPQ---ELKSAAQEQLEYMLTE---XXXXXXXXXXXXIVRSQ 216
            + LSA   A S    ++ P+   ELK++AQEQ+E+ML+E               +VR  
Sbjct: 14  NVFLSALHFAMSIDTLKNSPELVDELKTSAQEQVEFMLSEDEEVRLLISEEEVKSVVRLG 73

Query: 217 VKDCVAALLSRFSGFTSSILMEQGEAPLGHGDAEVQQELHSLVSDISWVCQILSKLEMMK 276
           + + ++ LL R S     IL E  E         V + L+    DI W+C++L ++E+MK
Sbjct: 74  ISNVISMLLDRLSSLLV-ILPECTEFS-------VLKTLY----DIEWLCKVLPRMELMK 121

Query: 277 CVVVYWIGVSSDVVEAVDKACGGISCLKTRLKVIEVSAKVLEAIAFGNIVLPTEKRCDAV 336
            +VV W   SS+++    K       L  ++K++EV+ K+LEA+ +G +++P++ R   +
Sbjct: 122 DLVVKWTDASSEILVIAQKCELDSRILGVKVKLVEVTGKILEAVGYGIVIVPSKSRTCLL 181

Query: 337 NVWIGFARRTKPLVGHPEHDDDDGDAEAPKINLDSEVWQSLESAIVSIVLTLPSNSQADI 396
            +W+ F RR K LV        D +    +  +D ++ + +E ++VS+VLTLPSN QA++
Sbjct: 182 KIWLPFIRRLKTLV--------DAEGCEYEYRMDEDLCEFIEGSMVSLVLTLPSNDQAEV 233

Query: 397 LSDWLQS---KHAKYPDLTEAFEVWCYRSKAAKRRL 429
             +W++    +  K+PDL+EAFEVWCYRSK+AKRRL
Sbjct: 234 FGEWMRGIGLEGVKFPDLSEAFEVWCYRSKSAKRRL 269



>AT1G63850.1 | chr1:23696962-23698708 FORWARD LENGTH=549
          Length = 548

 Score = 64.7 bits (156), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 45/141 (31%), Positives = 74/141 (52%), Gaps = 9/141 (6%)

Query: 4   VRRAAGRPKIGDLATSDVVVRLRTPEGRDEWLYCHSGVLAAGSRYFADRLSDDWPTCQI- 62
           V R+ G  +  D  +SDV + L + +G    +  H  +L A SR+FA +LSD W   Q+ 
Sbjct: 127 VIRSPGN-QFNDPNSSDVKLTLSSKDGISITMCVHRQILVAHSRFFAMKLSDRWSKQQLP 185

Query: 63  -LGSRYCVEVH-CQELDLSPHVTALRLLYAAE---PCSRFGVRGALGVLQAAAHLACPRV 117
              S Y VE+  C ++++  ++  L L+Y  +      R  V   LG+L+ +A +     
Sbjct: 186 PSSSPYIVEISDCDDVEV--YIETLMLMYCRDLRKKMMRHDVSRVLGILKVSAAIGFDAG 243

Query: 118 AAACVDYLESAPWDEADEEEI 138
             +C++YLE+APW E +E  I
Sbjct: 244 VLSCLEYLEAAPWSEDEEYRI 264



>AT3G50780.1 | chr3:18875662-18877341 REVERSE LENGTH=521
          Length = 520

 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 95/424 (22%), Positives = 168/424 (39%), Gaps = 57/424 (13%)

Query: 12  KIGDLATSDVVVRLRTPEGRDEWLYCHSGVLAAGSRYFADRLSDDWPTCQILGSRYCVEV 71
           + G+  +SD  V L   +G    L  H  VL   S +FA +L++            C+E+
Sbjct: 118 EFGEPGSSDAKVILVGKQGFCVKLSVHKKVLVDHSCFFAKKLAEKDSVF------ACLEI 171

Query: 72  H-CQELDLSPHVTALRLLYAAEPCSRF---GVRGALGVLQAAAHLACPRVAAACVDYLES 127
             C++ +L  +V  + L+Y  +   R     V   L VL+ A  L       +C+DYLE+
Sbjct: 172 ESCEDAEL--YVETIGLMYCKDMKQRLMKQNVSRVLRVLKVAELLGFSSCIQSCLDYLEA 229

Query: 128 APW-DEADEEEILRTIPCL---GPQYECVLARL--RPIDPAPVAGILLSAFRHATSTRSP 181
            PW  E +EE+++ +I  L   G     VL R+    +DP       +      +     
Sbjct: 230 VPWVGEEEEEKVISSILRLKTEGVGVTPVLKRVASNAVDPPKETLSRIIELVLRSKEEKS 289

Query: 182 PQELKSAAQEQLEYMLTEXXXXXXXXXXXXIVRSQVKDCVAALLSRFSGFTSSILMEQGE 241
            +E+KS   +    +L E             + S  + C+ ++LS F   +      +GE
Sbjct: 290 RREMKSIVLK----LLREQNGANVADNFNDTIYSSCQTCLDSVLSLFKQAS------EGE 339

Query: 242 APLGHGDAEVQQELHSLVSDISWVCQILSKLEMMKCVVVYWIGVSSDVVEAVDKACGGIS 301
            P    + + +Q +     +++W+  +L++ +  +   V W     ++    +K      
Sbjct: 340 KP----ETDTKQ-IAVEADNLTWLLDVLAERQAAEEFSVTWAN-QKELALLHEKL----- 388

Query: 302 CLKTRLKVIEVSAKVLEAIAFGNIVLPTEKRCDAVNVWIGFARRTKPLVGHPEHDDDDGD 361
            L +R  +  V++++   I  G ++   + R   +  W+         + H     D   
Sbjct: 389 PLMSRYHISRVTSRLFIGIGRGELLPSKDTRLLLLTTWLQPLFNDYNWLQHGCRSFDG-- 446

Query: 362 AEAPKINLDSEVWQSLESAIVSIVLTLPSNSQADILSDWLQS---KHAKYPDLTEAFEVW 418
                        + +E  I   +LTLP   Q  IL  WL S        P+L  AFEVW
Sbjct: 447 -------------KLVEEGIGRTILTLPLEDQQSILLSWLGSFLNGGDGCPNLQRAFEVW 493

Query: 419 CYRS 422
             RS
Sbjct: 494 WRRS 497



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.320    0.134    0.410 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 9,240,441
Number of extensions: 372649
Number of successful extensions: 857
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 847
Number of HSP's successfully gapped: 4
Length of query: 439
Length of database: 11,106,569
Length adjustment: 102
Effective length of query: 337
Effective length of database: 8,310,137
Effective search space: 2800516169
Effective search space used: 2800516169
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 113 (48.1 bits)