Os07g0633800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os07g0633800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 37.67 | 0.288 | 10.9 | -0.334 | 0.204 | -1.02 | -0.221 | 1.34 | -0.0404 | 20.1 | 22.6 | 1538 | -- | -- |
| 41.68 | 0.301 | 10.9 | 0.139 | 0.209 | -1.02 | -0.215 | -- | 0.0675 | 20.1 | 22.3 | 1501 | -- | -- |
| 37.8 | 0.286 | 10.9 | -0.326 | 0.206 | -1.02 | -- | 1.33 | -0.0411 | 19.9 | 22.6 | 1533 | -- | -- |
| 41.72 | 0.301 | 10.9 | 0.0903 | 0.215 | -1.11 | -- | -- | 0.0537 | 19.7 | 22.1 | 1509 | -- | -- |
| 39.44 | 0.292 | 10.9 | -0.43 | -- | -1.02 | -- | 1.5 | -0.0883 | -- | 22.78 | 1979 | -- | -- |
| 83.05 | 0.427 | 10.8 | 0.493 | 0.198 | -- | -0.305 | -- | 0.438 | 20.8 | -- | -- | -- | -- |
| 83.33 | 0.427 | 10.8 | 0.504 | 0.202 | -- | -- | -- | 0.438 | 20.4 | -- | -- | -- | -- |
| 43.86 | 0.308 | 10.9 | 0.1 | -- | -1.04 | -- | -- | 0.0659 | -- | 22.33 | 1938 | -- | -- |
| 41.86 | 0.301 | 10.9 | -- | 0.207 | -1.1 | -- | -- | 0.0687 | 19.8 | 22 | 1518 | -- | -- |
| 85.61 | 0.432 | 10.8 | 0.503 | -- | -- | -- | -- | 0.436 | -- | -- | -- | -- | -- |
| 90.03 | 0.444 | 10.8 | -- | 0.2 | -- | -- | -- | 0.382 | 20.6 | -- | -- | -- | -- |
| 44.09 | 0.309 | 10.9 | -- | -- | -1.08 | -- | -- | 0.0517 | -- | 22.3 | 1951 | -- | -- |
| 92.28 | 0.448 | 10.8 | -- | -- | -- | -- | -- | 0.38 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 36.55 | temperature | 30 | 1440 | < th | dose dependent | rect. | 15 | 14 |
| 11 | 36.72 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 2 |
| 14 | 36.73 | temperature | 30 | 1440 | < th | dose dependent | sin | 15 | NA |
| 33 | 36.92 | temperature | 15 | 1440 | > th | dose dependent | rect. | 16 | 13 |
| 44 | 36.98 | temperature | 15 | 1440 | > th | dose dependent | rect. | 17 | 10 |
| 55 | 37.02 | temperature | 25 | 1440 | < th | dose dependent | rect. | 19 | 6 |
| 82 | 37.14 | temperature | 15 | 1440 | > th | dose dependent | sin | 14 | NA |
| 155 | 37.40 | temperature | 10 | 1440 | > th | dose dependent | rect. | 21 | 1 |
| 414 | 38.17 | temperature | 15 | 720 | > th | dose dependent | rect. | 19 | 23 |
| 463 | 38.36 | temperature | 30 | 1440 | < th | dose dependent | no | NA | NA |
| 469 | 38.38 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 11 |
| 490 | 38.44 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 23 |
| 496 | 38.45 | temperature | 30 | 1440 | < th | dose dependent | rect. | 23 | 23 |
| 505 | 38.46 | temperature | 30 | 1440 | < th | dose dependent | rect. | 20 | 23 |
| 509 | 38.47 | temperature | 30 | 1440 | < th | dose dependent | rect. | 4 | 23 |
| 528 | 38.51 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 3 |
| 530 | 38.51 | radiation | 1 | 43200 | < th | dose independent | rect. | 18 | 6 |
| 588 | 38.60 | radiation | 1 | 43200 | > th | dose independent | rect. | 18 | 11 |
| 606 | 38.63 | radiation | 1 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 720 | 38.85 | temperature | 15 | 720 | > th | dose dependent | rect. | 23 | 23 |
| 794 | 38.98 | temperature | 15 | 720 | > th | dose dependent | no | NA | NA |
| 882 | 39.13 | temperature | 15 | 1440 | > th | dose dependent | rect. | 1 | 23 |
| 883 | 39.13 | temperature | 15 | 720 | > th | dose dependent | rect. | 3 | 23 |