Os07g0618500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Dihydropterin pyrophosphokinase /dihydropteroate synthase precursor (EC 2.5.1.15).
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Os07g0618500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Dihydropterin pyrophosphokinase /dihydropteroate synthase precursor (EC 2.5.1.15).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 45.94 | 0.318 | 7.16 | 0.0219 | 0.0122 | 0.627 | 0.197 | 1.96 | 0.0169 | 17.1 | 22.12 | 7 | -- | -- |
| 47.53 | 0.324 | 7.2 | -0.282 | 0.0376 | 0.787 | -0.591 | -- | -0.0525 | 2.56 | 24.12 | 12 | -- | -- |
| 46.02 | 0.316 | 7.16 | 0.0372 | 0.0133 | 0.632 | -- | 2.08 | 0.0225 | 19.1 | 22.14 | 6 | -- | -- |
| 48.44 | 0.324 | 7.2 | -0.28 | 0.06 | 0.843 | -- | -- | -0.0594 | 3.07 | 24.1 | 12 | -- | -- |
| 46.03 | 0.316 | 7.16 | 0.0365 | -- | 0.635 | -- | 2.08 | 0.021 | -- | 22.2 | 6 | -- | -- |
| 57.03 | 0.354 | 7.18 | -0.159 | 0.278 | -- | 0.838 | -- | 0.0393 | 14.9 | -- | -- | -- | -- |
| 59.43 | 0.361 | 7.17 | -0.14 | 0.281 | -- | -- | -- | 0.0443 | 14.9 | -- | -- | -- | -- |
| 48.57 | 0.325 | 7.19 | -0.27 | -- | 0.786 | -- | -- | -0.0507 | -- | 24.1 | 12 | -- | -- |
| 50.41 | 0.331 | 7.19 | -- | 0.0232 | 0.766 | -- | -- | -0.0171 | 3.45 | 24.2 | 12 | -- | -- |
| 63.99 | 0.374 | 7.17 | -0.152 | -- | -- | -- | -- | 0.0371 | -- | -- | -- | -- | -- |
| 59.94 | 0.362 | 7.17 | -- | 0.284 | -- | -- | -- | 0.0598 | 14.9 | -- | -- | -- | -- |
| 50.43 | 0.331 | 7.19 | -- | -- | 0.748 | -- | -- | -0.0145 | -- | 24.2 | 10 | -- | -- |
| 64.6 | 0.375 | 7.17 | -- | -- | -- | -- | -- | 0.0539 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 45.72 | temperature | 20 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 2 | 45.83 | temperature | 10 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 5 | 45.91 | temperature | 15 | 720 | > th | dose dependent | rect. | 4 | 5 |
| 9 | 46.01 | temperature | 20 | 10 | > th | dose dependent | rect. | 7 | 19 |
| 12 | 46.06 | temperature | 20 | 10 | > th | dose dependent | sin | 0 | NA |
| 13 | 46.13 | temperature | 20 | 90 | > th | dose dependent | sin | 1 | NA |
| 14 | 46.14 | temperature | 10 | 10 | > th | dose dependent | sin | 0 | NA |
| 16 | 46.15 | temperature | 20 | 10 | > th | dose dependent | rect. | 6 | 22 |
| 43 | 46.36 | temperature | 20 | 10 | > th | dose dependent | rect. | 7 | 13 |
| 58 | 46.47 | temperature | 25 | 270 | > th | dose dependent | sin | 5 | NA |
| 79 | 46.61 | temperature | 25 | 90 | > th | dose dependent | rect. | 22 | 19 |
| 83 | 46.62 | temperature | 20 | 10 | > th | dose dependent | rect. | 3 | 23 |
| 94 | 46.66 | temperature | 20 | 270 | > th | dose dependent | rect. | 5 | 11 |
| 98 | 46.70 | temperature | 20 | 10 | > th | dose dependent | no | NA | NA |
| 116 | 46.78 | temperature | 25 | 10 | > th | dose dependent | rect. | 19 | 23 |
| 119 | 46.80 | temperature | 30 | 720 | < th | dose dependent | rect. | 24 | 12 |
| 152 | 46.92 | temperature | 25 | 270 | > th | dose dependent | rect. | 19 | 20 |
| 156 | 46.93 | temperature | 25 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 174 | 46.97 | temperature | 25 | 10 | > th | dose dependent | rect. | 4 | 16 |
| 184 | 46.98 | temperature | 25 | 10 | > th | dose dependent | rect. | 13 | 23 |
| 224 | 47.05 | temperature | 10 | 10 | > th | dose dependent | no | NA | NA |
| 244 | 47.10 | temperature | 25 | 90 | > th | dose dependent | rect. | 3 | 14 |
| 246 | 47.10 | temperature | 25 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 290 | 47.24 | temperature | 25 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 299 | 47.26 | temperature | 25 | 10 | > th | dose dependent | rect. | 9 | 23 |
| 374 | 47.38 | temperature | 25 | 720 | < th | dose dependent | rect. | 6 | 1 |
| 410 | 47.41 | temperature | 10 | 720 | > th | dose dependent | rect. | 22 | 17 |
| 598 | 47.78 | temperature | 30 | 720 | < th | dose dependent | sin | 5 | NA |
| 602 | 47.79 | temperature | 30 | 90 | < th | dose dependent | rect. | 9 | 9 |
| 609 | 47.80 | temperature | 30 | 720 | < th | dose dependent | rect. | 5 | 7 |
| 623 | 47.82 | temperature | 25 | 270 | > th | dose independent | rect. | 21 | 20 |
| 646 | 47.83 | temperature | 25 | 10 | > th | dose dependent | rect. | 11 | 23 |
| 647 | 47.84 | temperature | 30 | 90 | < th | dose dependent | sin | 0 | NA |
| 661 | 47.86 | temperature | 25 | 720 | < th | dose dependent | rect. | 5 | 5 |
| 682 | 47.90 | temperature | 30 | 270 | < th | dose dependent | sin | 2 | NA |
| 697 | 47.92 | temperature | 25 | 270 | < th | dose independent | rect. | 21 | 21 |
| 706 | 47.93 | temperature | 30 | 10 | < th | dose dependent | sin | 23 | NA |
| 712 | 47.94 | temperature | 25 | 270 | < th | dose independent | rect. | 22 | 18 |
| 718 | 47.95 | temperature | 30 | 270 | < th | dose dependent | rect. | 7 | 10 |
| 773 | 48.00 | temperature | 10 | 270 | > th | dose dependent | rect. | 18 | 23 |
| 780 | 48.01 | temperature | 20 | 90 | > th | dose dependent | rect. | 11 | 23 |
| 832 | 48.07 | temperature | 25 | 270 | > th | dose independent | rect. | 1 | 15 |
| 833 | 48.07 | temperature | 25 | 270 | > th | dose independent | rect. | 24 | 17 |
| 890 | 48.14 | temperature | 10 | 720 | > th | dose dependent | rect. | 22 | 11 |
| 910 | 48.16 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 13 |
| 975 | 48.23 | temperature | 30 | 90 | < th | dose dependent | rect. | 19 | 23 |
| 987 | 48.25 | temperature | 30 | 10 | < th | dose dependent | rect. | 10 | 8 |