Os07g0615200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : ZIM domain containing protein.
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Os07g0615200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : ZIM domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 100.83 | 0.472 | 14.8 | 0.998 | 1.04 | 3.62 | -0.0781 | 7.62 | 0.541 | 3.01 | 6.126 | 361 | -- | -- |
| 105.28 | 0.478 | 14.7 | 0.927 | 1.01 | 2.45 | 0.209 | -- | 0.629 | 2.69 | 8.587 | 571 | -- | -- |
| 100.83 | 0.468 | 14.8 | 0.999 | 1.05 | 3.58 | -- | 7.55 | 0.539 | 3.05 | 6.047 | 360 | -- | -- |
| 103.74 | 0.474 | 14.7 | 0.822 | 0.937 | 2.1 | -- | -- | 0.579 | 2.73 | 8.5 | 592 | -- | -- |
| 149.96 | 0.57 | 14.8 | 1.05 | -- | 3.25 | -- | 7.41 | 0.587 | -- | 6.151 | 734 | -- | -- |
| 121.73 | 0.517 | 14.8 | 0.645 | 0.923 | -- | -0.108 | -- | 0.506 | 2.36 | -- | -- | -- | -- |
| 121.77 | 0.517 | 14.8 | 0.648 | 0.924 | -- | -- | -- | 0.507 | 2.39 | -- | -- | -- | -- |
| 145.72 | 0.562 | 14.7 | 1.01 | -- | 1.53 | -- | -- | 0.552 | -- | 3.1 | 900 | -- | -- |
| 120.72 | 0.512 | 14.8 | -- | 0.92 | 1.86 | -- | -- | 0.498 | 2.59 | 8.7 | 571 | -- | -- |
| 172.2 | 0.613 | 14.7 | 0.687 | -- | -- | -- | -- | 0.529 | -- | -- | -- | -- | -- |
| 132.83 | 0.539 | 14.8 | -- | 0.936 | -- | -- | -- | 0.435 | 2.4 | -- | -- | -- | -- |
| 169.83 | 0.607 | 14.8 | -- | -- | 1.73 | -- | -- | 0.487 | -- | 10.4 | 706 | -- | -- |
| 184.64 | 0.634 | 14.8 | -- | -- | -- | -- | -- | 0.453 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 101.11 | wind | 7 | 270 | > th | dose dependent | rect. | 11 | 22 |
| 2 | 101.18 | wind | 7 | 270 | > th | dose dependent | rect. | 11 | 18 |
| 12 | 101.50 | wind | 7 | 270 | > th | dose dependent | sin | 16 | NA |
| 26 | 102.00 | wind | 9 | 720 | < th | dose independent | sin | 5 | NA |
| 27 | 102.11 | wind | 9 | 720 | < th | dose independent | sin | 23 | NA |
| 34 | 102.27 | wind | 9 | 270 | > th | dose dependent | sin | 10 | NA |
| 37 | 102.34 | wind | 9 | 720 | > th | dose dependent | rect. | 19 | 21 |
| 42 | 102.43 | wind | 9 | 270 | < th | dose independent | sin | 13 | NA |
| 46 | 102.49 | wind | 9 | 720 | > th | dose dependent | rect. | 12 | 4 |
| 53 | 102.59 | wind | 7 | 270 | > th | dose independent | rect. | 11 | 23 |
| 58 | 102.70 | wind | 9 | 720 | > th | dose dependent | rect. | 1 | 16 |
| 61 | 102.73 | wind | 9 | 720 | > th | dose dependent | rect. | 9 | 8 |
| 72 | 102.85 | wind | 9 | 720 | > th | dose independent | rect. | 19 | 21 |
| 73 | 102.86 | wind | 9 | 270 | > th | dose independent | sin | 10 | NA |
| 76 | 102.88 | wind | 7 | 270 | > th | dose independent | rect. | 11 | 18 |
| 94 | 102.99 | wind | 9 | 720 | > th | dose independent | rect. | 12 | 4 |
| 102 | 103.05 | wind | 7 | 720 | < th | dose independent | rect. | 4 | 23 |
| 123 | 103.13 | wind | 9 | 720 | > th | dose dependent | rect. | 15 | 1 |
| 127 | 103.14 | wind | 7 | 270 | > th | dose dependent | rect. | 8 | 21 |
| 130 | 103.15 | wind | 7 | 270 | > th | dose dependent | no | NA | NA |
| 139 | 103.16 | wind | 7 | 270 | > th | dose dependent | rect. | 4 | 23 |
| 147 | 103.20 | wind | 7 | 270 | > th | dose dependent | rect. | 1 | 23 |
| 168 | 103.31 | wind | 9 | 720 | > th | dose independent | rect. | 10 | 7 |
| 169 | 103.31 | wind | 5 | 720 | > th | dose dependent | rect. | 11 | 2 |
| 172 | 103.35 | wind | 9 | 720 | > th | dose independent | rect. | 1 | 16 |
| 235 | 103.71 | wind | 9 | 720 | > th | dose dependent | sin | 3 | NA |
| 238 | 103.73 | wind | 5 | 720 | > th | dose dependent | rect. | 8 | 9 |
| 257 | 103.81 | wind | 5 | 720 | > th | dose dependent | sin | 1 | NA |
| 260 | 103.84 | wind | 7 | 270 | > th | dose independent | sin | 16 | NA |
| 261 | 103.84 | wind | 9 | 720 | > th | dose independent | rect. | 18 | 19 |
| 265 | 103.86 | wind | 9 | 720 | > th | dose dependent | rect. | 18 | 19 |
| 268 | 103.89 | wind | 7 | 720 | < th | dose independent | rect. | 6 | 19 |
| 275 | 103.91 | wind | 9 | 720 | > th | dose independent | sin | 2 | NA |
| 293 | 103.98 | wind | 5 | 720 | > th | dose dependent | rect. | 21 | 20 |
| 331 | 104.07 | wind | 5 | 720 | > th | dose dependent | rect. | 8 | 7 |
| 333 | 104.08 | wind | 7 | 720 | < th | dose independent | rect. | 23 | 17 |
| 357 | 104.13 | wind | 9 | 720 | < th | dose independent | no | NA | NA |
| 413 | 104.23 | wind | 9 | 720 | > th | dose independent | rect. | 12 | 1 |
| 451 | 104.33 | wind | 7 | 270 | > th | dose independent | rect. | 8 | 21 |
| 465 | 104.37 | wind | 7 | 270 | > th | dose independent | no | NA | NA |
| 476 | 104.39 | wind | 7 | 270 | > th | dose independent | rect. | 4 | 23 |
| 484 | 104.41 | wind | 5 | 720 | < th | dose independent | sin | 3 | NA |
| 509 | 104.45 | wind | 7 | 270 | > th | dose independent | rect. | 1 | 23 |
| 530 | 104.48 | wind | 5 | 720 | > th | dose independent | rect. | 8 | 7 |
| 600 | 104.57 | wind | 5 | 720 | > th | dose independent | rect. | 10 | 4 |
| 949 | 104.83 | wind | 7 | 720 | < th | dose independent | rect. | 21 | 20 |
| 961 | 104.84 | wind | 5 | 720 | > th | dose independent | rect. | 11 | 2 |