Os07g0606900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Heavy metal transport/detoxification protein domain containing protein.
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Os07g0606900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Heavy metal transport/detoxification protein domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 538.2 | 1.09 | 5.22 | -2.12 | 3.24 | -2.6 | -1.39 | 6.4 | -0.762 | 19.4 | 8.998 | 1591 | 10.9 | -- |
| 573.22 | 1.12 | 5.22 | -1.65 | 3.21 | -2.47 | 0.594 | -- | -0.656 | 19.4 | 7.849 | 1651 | 11.2 | -- |
| 541.48 | 1.08 | 5.23 | -2.1 | 3.16 | -2.4 | -- | 6.45 | -0.785 | 19.1 | 9.19 | 1616 | 12.2 | -- |
| 572.66 | 1.11 | 5.23 | -1.58 | 3.24 | -2.8 | -- | -- | -0.654 | 20.1 | 9.175 | 1649 | 9.21 | -- |
| 647.69 | 1.19 | 5.17 | -0.942 | -- | -4.09 | -- | 7.31 | -0.758 | -- | 9.968 | 2428 | 11.1 | -- |
| 631.41 | 1.18 | 5.15 | -1.7 | 2.73 | -- | -0.27 | -- | -0.425 | 18.2 | -- | -- | -- | -- |
| 631.58 | 1.18 | 5.15 | -1.7 | 2.73 | -- | -- | -- | -0.426 | 18.2 | -- | -- | -- | -- |
| 588.02 | 1.13 | 5.15 | -1.49 | -- | -4.04 | -- | -- | -0.667 | -- | 8.043 | 2357 | 8.5 | -- |
| 634.55 | 1.17 | 5.19 | -- | 3.31 | -3.01 | -- | -- | -0.492 | 20 | 10 | 1634 | 9.23 | -- |
| 1018.91 | 1.49 | 5.1 | -1.77 | -- | -- | -- | -- | -0.486 | -- | -- | -- | -- | -- |
| 707.32 | 1.24 | 5.11 | -- | 2.76 | -- | -- | -- | -0.237 | 18.2 | -- | -- | -- | -- |
| 641.98 | 1.18 | 5.11 | -- | -- | -4.32 | -- | -- | -0.563 | -- | 10 | 2377 | 8.74 | -- |
| 1101.51 | 1.55 | 5.06 | -- | -- | -- | -- | -- | -0.289 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 550.84 | radiation | 10 | 1440 | < th | dose dependent | sin | 16 | NA |
| 3 | 551.54 | radiation | 10 | 1440 | < th | dose dependent | rect. | 11 | 19 |
| 5 | 552.04 | radiation | 10 | 1440 | < th | dose dependent | rect. | 11 | 16 |
| 6 | 552.05 | radiation | 10 | 1440 | < th | dose dependent | rect. | 11 | 7 |
| 7 | 552.08 | radiation | 10 | 1440 | < th | dose dependent | rect. | 11 | 14 |
| 10 | 552.25 | radiation | 10 | 1440 | < th | dose dependent | rect. | 15 | 3 |
| 19 | 552.98 | radiation | 10 | 1440 | < th | dose dependent | rect. | 15 | 12 |
| 20 | 553.03 | radiation | 10 | 1440 | < th | dose dependent | rect. | 15 | 10 |
| 71 | 554.64 | radiation | 40 | 1440 | < th | dose dependent | rect. | 16 | 11 |
| 74 | 554.68 | radiation | 1 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 79 | 554.75 | radiation | 40 | 1440 | < th | dose dependent | rect. | 16 | 9 |
| 89 | 555.11 | radiation | 40 | 1440 | < th | dose dependent | rect. | 16 | 2 |
| 121 | 556.14 | wind | 3 | 4320 | > th | dose independent | rect. | 8 | 1 |
| 123 | 556.16 | humidity | 70 | 1440 | < th | dose dependent | rect. | 16 | 1 |
| 166 | 558.71 | radiation | 10 | 1440 | > th | dose independent | sin | 14 | NA |
| 178 | 559.35 | wind | 3 | 4320 | < th | dose independent | rect. | 8 | 1 |
| 182 | 559.58 | radiation | 10 | 1440 | > th | dose independent | rect. | 11 | 20 |
| 184 | 559.69 | radiation | 10 | 1440 | > th | dose independent | rect. | 15 | 15 |
| 185 | 559.80 | radiation | 10 | 1440 | > th | dose independent | rect. | 15 | 3 |
| 198 | 559.86 | humidity | 70 | 1440 | < th | dose independent | rect. | 17 | 15 |
| 199 | 559.94 | humidity | 70 | 1440 | < th | dose independent | rect. | 17 | 2 |
| 210 | 561.37 | radiation | 10 | 1440 | < th | dose independent | rect. | 15 | 2 |
| 213 | 561.54 | radiation | 10 | 1440 | > th | dose independent | rect. | 11 | 7 |
| 233 | 561.86 | humidity | 60 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 261 | 562.91 | radiation | 10 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 288 | 563.79 | humidity | 60 | 1440 | > th | dose independent | rect. | 15 | 3 |
| 324 | 564.42 | humidity | 70 | 1440 | < th | dose dependent | rect. | 15 | 18 |
| 441 | 566.04 | wind | 3 | 4320 | > th | dose independent | rect. | 5 | 4 |
| 478 | 566.66 | humidity | 60 | 1440 | < th | dose independent | rect. | 15 | 3 |
| 483 | 566.74 | temperature | 15 | 1440 | > th | dose independent | rect. | 6 | 10 |
| 500 | 567.27 | wind | 3 | 4320 | < th | dose independent | rect. | 5 | 4 |
| 503 | 567.36 | humidity | 60 | 1440 | > th | dose independent | rect. | 15 | 19 |
| 505 | 567.52 | radiation | 10 | 1440 | < th | dose independent | rect. | 15 | 12 |
| 509 | 567.57 | radiation | 10 | 1440 | < th | dose independent | rect. | 15 | 10 |
| 526 | 567.71 | humidity | 70 | 1440 | < th | dose independent | sin | 12 | NA |
| 554 | 568.05 | humidity | 60 | 1440 | > th | dose independent | rect. | 15 | 12 |
| 555 | 568.06 | humidity | 60 | 1440 | > th | dose independent | rect. | 15 | 10 |
| 562 | 568.12 | humidity | 60 | 1440 | > th | dose independent | rect. | 15 | 17 |
| 601 | 568.79 | humidity | 70 | 1440 | < th | dose dependent | sin | 13 | NA |
| 624 | 568.99 | humidity | 70 | 1440 | > th | dose independent | rect. | 17 | 15 |
| 751 | 570.60 | radiation | 10 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 783 | 570.70 | humidity | 70 | 1440 | > th | dose independent | sin | 12 | NA |
| 802 | 570.81 | radiation | 30 | 4320 | > th | dose dependent | rect. | 7 | 1 |
| 886 | 571.95 | atmosphere | 995 | 43200 | < th | dose dependent | rect. | 13 | 15 |
| 900 | 572.25 | atmosphere | 995 | 43200 | < th | dose dependent | sin | 15 | NA |
| 924 | 572.61 | radiation | 30 | 4320 | < th | dose independent | rect. | 6 | 2 |
| 938 | 572.75 | radiation | 10 | 1440 | > th | dose independent | rect. | 15 | 22 |
| 941 | 572.80 | humidity | 70 | 1440 | > th | dose independent | rect. | 17 | 10 |
| 942 | 572.82 | humidity | 70 | 1440 | > th | dose independent | rect. | 17 | 8 |