Os07g0585100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Armadillo-like helical domain containing protein.
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Os07g0585100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Armadillo-like helical domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 27.64 | 0.247 | 13.2 | -0.363 | 0.674 | 1.45 | -0.0352 | 0.401 | -0.342 | 2.98 | 10.03 | 94 | -- | -- |
| 27.76 | 0.245 | 13.2 | -0.399 | 0.671 | 1.46 | -0.0877 | -- | -0.354 | 2.95 | 10.21 | 98 | -- | -- |
| 27.64 | 0.245 | 13.2 | -0.357 | 0.674 | 1.45 | -- | 0.439 | -0.34 | 2.98 | 9.942 | 93 | -- | -- |
| 27.79 | 0.246 | 13.2 | -0.42 | 0.672 | 1.46 | -- | -- | -0.357 | 2.98 | 10.21 | 94 | -- | -- |
| 36.39 | 0.281 | 13.2 | -0.451 | -- | 0.982 | -- | -0.229 | -0.33 | -- | 12.68 | 1132 | -- | -- |
| 48.18 | 0.325 | 13.2 | -0.128 | 0.262 | -- | -0.369 | -- | -0.155 | 2.98 | -- | -- | -- | -- |
| 48.62 | 0.327 | 13.2 | -0.12 | 0.26 | -- | -- | -- | -0.153 | 2.68 | -- | -- | -- | -- |
| 36.43 | 0.281 | 13.2 | -0.402 | -- | 0.979 | -- | -- | -0.318 | -- | 10.75 | 1129 | -- | -- |
| 31.92 | 0.263 | 13.2 | -- | 0.608 | 1.26 | -- | -- | -0.287 | 2.77 | 8.496 | 61 | -- | -- |
| 52.54 | 0.339 | 13.2 | -0.109 | -- | -- | -- | -- | -0.146 | -- | -- | -- | -- | -- |
| 49 | 0.327 | 13.2 | -- | 0.257 | -- | -- | -- | -0.139 | 2.67 | -- | -- | -- | -- |
| 40.14 | 0.295 | 13.2 | -- | -- | 0.817 | -- | -- | -0.249 | -- | 9.592 | 1099 | -- | -- |
| 52.86 | 0.339 | 13.2 | -- | -- | -- | -- | -- | -0.134 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 27.65 | temperature | 10 | 90 | > th | dose dependent | no | NA | NA |
| 5 | 27.77 | temperature | 30 | 30 | < th | dose dependent | rect. | 3 | 23 |
| 9 | 28.03 | temperature | 15 | 270 | > th | dose dependent | rect. | 15 | 23 |
| 10 | 28.07 | temperature | 30 | 90 | < th | dose dependent | rect. | 11 | 23 |
| 11 | 28.09 | temperature | 10 | 270 | > th | dose dependent | rect. | 4 | 23 |
| 13 | 28.30 | temperature | 30 | 90 | < th | dose dependent | rect. | 15 | 23 |
| 14 | 28.32 | temperature | 30 | 90 | < th | dose dependent | no | NA | NA |
| 15 | 28.33 | temperature | 30 | 30 | < th | dose dependent | rect. | 9 | 23 |
| 16 | 28.38 | temperature | 30 | 90 | < th | dose dependent | rect. | 17 | 23 |
| 18 | 28.45 | temperature | 30 | 10 | < th | dose dependent | rect. | 13 | 23 |
| 23 | 28.56 | temperature | 15 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 28 | 28.65 | temperature | 15 | 270 | > th | dose dependent | rect. | 17 | 23 |
| 33 | 28.69 | temperature | 15 | 90 | > th | dose dependent | rect. | 6 | 23 |
| 47 | 28.86 | temperature | 30 | 270 | < th | dose dependent | rect. | 21 | 23 |
| 51 | 28.89 | temperature | 30 | 270 | < th | dose dependent | rect. | 24 | 23 |
| 55 | 28.94 | temperature | 30 | 270 | < th | dose dependent | rect. | 9 | 23 |
| 76 | 29.12 | temperature | 30 | 10 | < th | dose dependent | rect. | 1 | 23 |
| 79 | 29.15 | temperature | 15 | 10 | > th | dose dependent | rect. | 23 | 23 |
| 83 | 29.17 | temperature | 15 | 10 | > th | dose dependent | rect. | 21 | 23 |
| 85 | 29.19 | temperature | 15 | 90 | > th | dose dependent | rect. | 21 | 23 |
| 90 | 29.24 | temperature | 10 | 270 | > th | dose dependent | sin | 9 | NA |
| 92 | 29.24 | temperature | 15 | 270 | > th | dose dependent | rect. | 19 | 23 |
| 140 | 29.61 | temperature | 30 | 270 | < th | dose dependent | sin | 9 | NA |
| 223 | 30.30 | temperature | 30 | 30 | < th | dose dependent | rect. | 5 | 23 |
| 300 | 30.71 | temperature | 20 | 10 | > th | dose dependent | rect. | 17 | 23 |
| 359 | 31.00 | temperature | 10 | 720 | > th | dose dependent | rect. | 15 | 18 |
| 368 | 31.03 | temperature | 20 | 90 | > th | dose dependent | rect. | 9 | 23 |
| 399 | 31.17 | temperature | 20 | 10 | > th | dose dependent | rect. | 13 | 23 |
| 439 | 31.34 | temperature | 20 | 10 | > th | dose dependent | rect. | 23 | 21 |
| 548 | 31.74 | temperature | 20 | 720 | > th | dose dependent | rect. | 19 | 16 |
| 602 | 31.92 | temperature | 20 | 1440 | > th | dose dependent | rect. | 24 | 1 |
| 603 | 31.92 | temperature | 25 | 720 | < th | dose dependent | rect. | 17 | 14 |
| 697 | 32.07 | temperature | 20 | 270 | > th | dose dependent | rect. | 21 | 12 |
| 721 | 32.11 | temperature | 25 | 720 | < th | dose dependent | sin | 13 | NA |
| 771 | 32.18 | temperature | 30 | 270 | < th | dose dependent | rect. | 21 | 14 |
| 776 | 32.19 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 16 |
| 880 | 32.36 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 1 |