BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os07g0585100 Os07g0585100|AK103268
(336 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G47540.1 | chr5:19283265-19285328 REVERSE LENGTH=344 548 e-156
AT4G17270.1 | chr4:9676406-9678568 FORWARD LENGTH=344 507 e-144
AT2G03410.1 | chr2:1033907-1034953 FORWARD LENGTH=349 438 e-123
AT5G18940.1 | chr5:6325972-6328097 FORWARD LENGTH=346 274 5e-74
>AT5G47540.1 | chr5:19283265-19285328 REVERSE LENGTH=344
Length = 343
Score = 548 bits (1412), Expect = e-156, Method: Compositional matrix adjust.
Identities = 257/337 (76%), Positives = 304/337 (90%), Gaps = 1/337 (0%)
Query: 1 MKGLFKSKPRTPADVVRQTRELLIFLDLHSGSRG-GDAKREEKMAELSKNIRELKSILYG 59
MKGLFKSKPRTPAD+VRQTR+LL+F D + D+KR+EKMAELS+NIR++KSILYG
Sbjct: 1 MKGLFKSKPRTPADLVRQTRDLLLFSDRSTSLPDLRDSKRDEKMAELSRNIRDMKSILYG 60
Query: 60 NGESEPVTEACVQLTQEFFRENTLRLLIICLPKLNLETRKDATQVVANLQRQQVSSKIVA 119
N E+EPV EAC QLTQEFF+E+TLRLLI CLPKLNLETRKDATQVVANLQRQQV+S+++A
Sbjct: 61 NSEAEPVAEACAQLTQEFFKEDTLRLLITCLPKLNLETRKDATQVVANLQRQQVNSRLIA 120
Query: 120 SEYLEANKDLLDTLISGYENMDIALHYGSMLRECIRHQSIARYVLESDHMKKFFDYIQLP 179
S+YLEAN DL+D LI G+EN D+ALHYG+M RECIRHQ +A+YVLESDH+KKFFDYIQLP
Sbjct: 121 SDYLEANIDLMDVLIEGFENTDMALHYGAMFRECIRHQIVAKYVLESDHVKKFFDYIQLP 180
Query: 180 NFDIASDASATFKELLTRHKATVAEFLSKNYDWFFSEFNTRLLSSTNYITKRQAIKFLGD 239
NFDIA+DA+ATFKELLTRHK+TVAEFL+KN DWFF+++N++LL S+NYIT+RQAIK LGD
Sbjct: 181 NFDIAADAAATFKELLTRHKSTVAEFLTKNEDWFFADYNSKLLESSNYITRRQAIKLLGD 240
Query: 240 MLLDRSNSTVMMRYVSSKDNLMILMNLLRDSSKNIQIEAFHVFKLFAANKNKPTEVVNIL 299
+LLDRSNS VM +YVSS+DNL ILMNLLR+SSK+IQIEAFHVFKLFAAN+NKP ++VNIL
Sbjct: 241 ILLDRSNSAVMTKYVSSRDNLRILMNLLRESSKSIQIEAFHVFKLFAANQNKPADIVNIL 300
Query: 300 VTNRSKLLRFFAGFKIDKEDEQFEADKEQVIKEISAL 336
V NRSKLLR A K DKEDE+FEADK QV++EI+AL
Sbjct: 301 VANRSKLLRLLADLKPDKEDERFEADKSQVLREIAAL 337
>AT4G17270.1 | chr4:9676406-9678568 FORWARD LENGTH=344
Length = 343
Score = 507 bits (1305), Expect = e-144, Method: Compositional matrix adjust.
Identities = 239/337 (70%), Positives = 292/337 (86%), Gaps = 1/337 (0%)
Query: 1 MKGLFKSKPRTPADVVRQTRELLIFLDL-HSGSRGGDAKREEKMAELSKNIRELKSILYG 59
M+GLFKSKPRTPAD+VRQTR+LL++ D +S ++KREEKM ELSK+IR+LK ILYG
Sbjct: 1 MRGLFKSKPRTPADIVRQTRDLLLYADRSNSFPDLRESKREEKMVELSKSIRDLKLILYG 60
Query: 60 NGESEPVTEACVQLTQEFFRENTLRLLIICLPKLNLETRKDATQVVANLQRQQVSSKIVA 119
N E+EPV EAC QLTQEFF+ +TLR L+ LP LNLE RKDATQVVANLQRQQV+S+++A
Sbjct: 61 NSEAEPVAEACAQLTQEFFKADTLRRLLTSLPNLNLEARKDATQVVANLQRQQVNSRLIA 120
Query: 120 SEYLEANKDLLDTLISGYENMDIALHYGSMLRECIRHQSIARYVLESDHMKKFFDYIQLP 179
++YLE+N DL+D L+ G+EN D+ALHYG+M RECIRHQ +A+YVL+S+H+KKFF YIQLP
Sbjct: 121 ADYLESNIDLMDFLVDGFENTDMALHYGTMFRECIRHQIVAKYVLDSEHVKKFFYYIQLP 180
Query: 180 NFDIASDASATFKELLTRHKATVAEFLSKNYDWFFSEFNTRLLSSTNYITKRQAIKFLGD 239
NFDIA+DA+ATFKELLTRHK+TVAEFL KN DWFF+++N++LL STNYIT+RQAIK LGD
Sbjct: 181 NFDIAADAAATFKELLTRHKSTVAEFLIKNEDWFFADYNSKLLESTNYITRRQAIKLLGD 240
Query: 240 MLLDRSNSTVMMRYVSSKDNLMILMNLLRDSSKNIQIEAFHVFKLFAANKNKPTEVVNIL 299
+LLDRSNS VM +YVSS DNL ILMNLLR+SSK IQIEAFHVFKLF AN+NKP+++ NIL
Sbjct: 241 ILLDRSNSAVMTKYVSSMDNLRILMNLLRESSKTIQIEAFHVFKLFVANQNKPSDIANIL 300
Query: 300 VTNRSKLLRFFAGFKIDKEDEQFEADKEQVIKEISAL 336
V NR+KLLR A K DKEDE+F+ADK QV++EI+ L
Sbjct: 301 VANRNKLLRLLADIKPDKEDERFDADKAQVVREIANL 337
>AT2G03410.1 | chr2:1033907-1034953 FORWARD LENGTH=349
Length = 348
Score = 438 bits (1127), Expect = e-123, Method: Compositional matrix adjust.
Identities = 208/340 (61%), Positives = 275/340 (80%), Gaps = 6/340 (1%)
Query: 1 MKGLFKSKPRTPADVVRQTRELLIFLDLHSGSRGGDAKREEKM---AELSKNIRELKSIL 57
MKGLFK+K R P ++VRQTR+L+ + S DA+ +++ AEL +NIR+LKSIL
Sbjct: 1 MKGLFKNKSRLPGEIVRQTRDLIALAE--SEEEETDARNSKRLGICAELCRNIRDLKSIL 58
Query: 58 YGNGESEPVTEACVQLTQEFFRENTLRLLIICLPKLNLETRKDATQVVANLQRQQVSSKI 117
YGNGE+EPV EAC+ LTQEFFR +TLR LI +PKL+LE RKDATQ+VANLQ+QQV ++
Sbjct: 59 YGNGEAEPVPEACLLLTQEFFRADTLRPLIKSIPKLDLEARKDATQIVANLQKQQVEFRL 118
Query: 118 VASEYLEANKDLLDTLISGYE-NMDIALHYGSMLRECIRHQSIARYVLESDHMKKFFDYI 176
VASEYLE+N D++D+L+ G + + ++ALHY ML+EC+RHQ +A+Y+LES +++KFFDY+
Sbjct: 119 VASEYLESNLDVIDSLVEGIDHDHELALHYTGMLKECVRHQVVAKYILESKNLEKFFDYV 178
Query: 177 QLPNFDIASDASATFKELLTRHKATVAEFLSKNYDWFFSEFNTRLLSSTNYITKRQAIKF 236
QLP FD+A+DAS F+ELLTRHK+TVAE+L+KNY+WFF+E+NT+LL +Y TKRQA K
Sbjct: 179 QLPYFDVATDASKIFRELLTRHKSTVAEYLAKNYEWFFAEYNTKLLEKGSYFTKRQASKL 238
Query: 237 LGDMLLDRSNSTVMMRYVSSKDNLMILMNLLRDSSKNIQIEAFHVFKLFAANKNKPTEVV 296
LGD+L+DRSNS VM++YVSS DNL I+MNLLR+ +KNIQ+EAFH+FKLF AN+NKP ++V
Sbjct: 239 LGDVLMDRSNSGVMVKYVSSLDNLRIMMNLLREPTKNIQLEAFHIFKLFVANENKPEDIV 298
Query: 297 NILVTNRSKLLRFFAGFKIDKEDEQFEADKEQVIKEISAL 336
ILV NR+K+LR FA K +KED FE DK V+ EI+ L
Sbjct: 299 AILVANRTKILRLFADLKPEKEDVGFETDKALVMNEIATL 338
>AT5G18940.1 | chr5:6325972-6328097 FORWARD LENGTH=346
Length = 345
Score = 274 bits (700), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 144/318 (45%), Positives = 207/318 (65%), Gaps = 5/318 (1%)
Query: 7 SKPRTPADVVRQTRELLIFLDLHSGSRGGDAKREEKMAELSKNIRELKSILYGNGESEPV 66
S+P+TP +VV+ R+ L+ LD + + E+ + E+ KN L+ IL G+GE+EP
Sbjct: 9 SRPKTPQEVVKAIRDSLMALD--TKTVVEVKALEKALEEVEKNFSSLRGILSGDGETEPN 66
Query: 67 TEACVQLTQEFFRENTLRLLIICLPKLNLETRKDATQVVANLQRQQVSSKIVASEYLEAN 126
+ VQL EF +E+ + L+I L L ETRKD + L +Q+V +Y E +
Sbjct: 67 ADQAVQLALEFCKEDVVSLVIHKLHILGWETRKDLLHCWSILLKQKVGDTYCCVQYFEEH 126
Query: 127 KDLLDTLISGYENMDIALHYGSMLRECIRHQSIARYVLESDHMKKFFDYIQLPNFDIASD 186
+LLD+L+ Y+N +IALH GSMLRECI+ S+A+Y+LES + FF +++LPNFD+ASD
Sbjct: 127 FELLDSLVVCYDNKEIALHCGSMLRECIKFPSLAKYILESACFELFFKFVELPNFDVASD 186
Query: 187 ASATFKELLTRHKATVAEFLSKNYDWFFSEFNTRLLSSTNYITKRQAIKFLGDMLLDRSN 246
A +TFK+LLT+H + V+EFL+ +Y FF + RLL+S+NY+T+RQ++K L D LL+ N
Sbjct: 187 AFSTFKDLLTKHDSVVSEFLTSHYTEFFDVYE-RLLTSSNYVTRRQSLKLLSDFLLEPPN 245
Query: 247 STVMMRYVSSKDNLMILMNLLRDSSKNIQIEAFHVFKLFAANKNKPTEVVNILVTNRSKL 306
S +M +++ L ++M LL+DSSKNIQI AFH+FK+F AN NKP EV IL N KL
Sbjct: 246 SHIMKKFILEVRYLKVIMTLLKDSSKNIQISAFHIFKIFVANPNKPQEVKIILARNHEKL 305
Query: 307 LRFFAGFKIDK--EDEQF 322
L K ED+QF
Sbjct: 306 LELLHDLSPGKGSEDDQF 323
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.320 0.134 0.367
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 6,507,141
Number of extensions: 253166
Number of successful extensions: 803
Number of sequences better than 1.0e-05: 4
Number of HSP's gapped: 796
Number of HSP's successfully gapped: 4
Length of query: 336
Length of database: 11,106,569
Length adjustment: 99
Effective length of query: 237
Effective length of database: 8,392,385
Effective search space: 1988995245
Effective search space used: 1988995245
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 112 (47.8 bits)