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Os07g0584000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Yippee-like protein CG15309.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.73 (0.0195) R2 : 0.662
β1 : -1.71 (0.0713) R2dD : 0.446 R2D : 0.402
β2 : 0.887 (0.0484) R2dC : 0.249 R2C : 0.228
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.15 (0.0416) R2dN8 : 0.0129 R2N8 : -0.018
σ : 0.366
deviance : 61.12
__
_____
C
peak time of C : 3.08
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
52.1 0.339 9.62 -1.07 0.829 -0.103 -0.574 4.5 -0.066 3.12 29.62 1172 -- --
53.27 0.34 9.72 -1.87 0.829 0.422 -0.524 -- -0.114 3.14 28.79 1213 -- --
53.16 0.34 9.62 -1.07 0.831 -0.1 -- 4.37 -0.0658 3.18 29.6 1178 -- --
53.77 0.342 9.71 -1.81 0.833 0.392 -- -- -0.0759 3.19 31.09 1201 -- --
91.27 0.445 9.6 -0.917 -- -0.0565 -- 5.26 -0.026 -- 29.6 1186 -- --
60.5 0.365 9.73 -1.72 0.888 -- -0.433 -- -0.152 3.04 -- -- -- --
61.12 0.366 9.73 -1.71 0.887 -- -- -- -0.15 3.08 -- -- -- --
92.37 0.448 9.71 -1.82 -- 0.531 -- -- -0.0523 -- 30.87 1189 -- --
137.24 0.546 9.68 -- 0.83 0.175 -- -- 0.0721 3.12 33.65 1107 -- --
106.06 0.481 9.73 -1.68 -- -- -- -- -0.126 -- -- -- -- --
138.64 0.551 9.68 -- 0.853 -- -- -- 0.0415 3.07 -- -- -- --
175.14 0.618 9.69 -- -- -0.838 -- -- 0.0307 -- 30.87 1189 -- --
180.27 0.627 9.68 -- -- -- -- -- 0.0596 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 48.85 temperature 10.0 270 > th dose dependent rect. 1 7
2 48.95 radiation 20.0 270 < th dose independent rect. 1 7
3 48.99 atmosphere 1000.0 270 > th dose independent rect. 19 7
4 49.00 wind 9.0 270 < th dose independent rect. 7 18
5 49.05 humidity 50.0 270 > th dose independent rect. 7 18
8 49.15 temperature 10.0 270 > th dose dependent rect. 2 5
11 49.18 precipitation 0.1 270 < th dose independent rect. 1 6
12 49.18 precipitation 0.1 270 < th dose dependent rect. 1 6
13 49.18 temperature 10.0 270 > th dose dependent rect. 2 17
14 49.19 radiation 40.0 270 < th dose dependent rect. 1 7
15 49.24 humidity 80.0 270 > th dose independent rect. 19 6
17 49.26 radiation 30.0 90 < th dose independent rect. 3 6
20 49.27 wind 7.0 270 < th dose independent rect. 1 6
23 49.29 humidity 70.0 90 > th dose independent rect. 3 6
27 49.31 humidity 50.0 270 > th dose dependent rect. 18 8
28 49.32 humidity 70.0 270 > th dose independent rect. 1 6
29 49.32 precipitation 0.1 90 < th dose independent rect. 3 6
30 49.32 precipitation 0.1 90 < th dose dependent rect. 3 6
42 49.40 wind 5.0 90 < th dose independent rect. 3 6
43 49.40 temperature 10.0 270 > th dose independent rect. 1 6
45 49.40 temperature 30.0 270 < th dose independent rect. 1 6
46 49.40 humidity 50.0 270 > th dose independent rect. 1 6
48 49.40 atmosphere 995.0 270 > th dose independent rect. 1 6
49 49.40 atmosphere 1015.0 270 < th dose independent rect. 1 6
51 49.40 temperature 10.0 270 > th dose independent rect. 7 18
59 49.56 wind 9.0 90 < th dose dependent rect. 3 6
61 49.58 precipitation 0.1 270 < th dose independent rect. 14 17
65 49.58 precipitation 0.1 270 < th dose dependent rect. 14 17
74 49.59 temperature 30.0 270 < th dose independent rect. 18 9
77 49.60 temperature 10.0 90 > th dose independent rect. 3 6
80 49.60 atmosphere 995.0 90 > th dose independent rect. 3 6
81 49.60 atmosphere 1015.0 90 < th dose independent rect. 3 6
84 49.62 wind 9.0 270 < th dose independent rect. 7 7
86 49.63 humidity 70.0 270 > th dose independent rect. 18 9
87 49.64 precipitation 0.1 270 < th dose independent rect. 3 16
88 49.64 precipitation 0.1 270 < th dose dependent rect. 3 16
97 49.71 temperature 30.0 90 < th dose independent rect. 3 6
99 49.71 precipitation 0.1 270 < th dose independent rect. 7 18
100 49.71 precipitation 0.1 270 < th dose dependent rect. 7 18
103 49.72 radiation 30.0 90 < th dose independent rect. 3 8
111 49.78 temperature 10.0 270 > th dose independent rect. 7 7
112 49.78 atmosphere 995.0 270 > th dose independent rect. 7 7
113 49.78 atmosphere 1015.0 270 < th dose independent rect. 7 7
114 49.78 temperature 10.0 270 > th dose independent rect. 14 17
116 49.79 precipitation 0.1 270 < th dose independent rect. 7 7
117 49.79 precipitation 0.1 270 < th dose dependent rect. 7 7
135 49.84 temperature 10.0 270 > th dose dependent rect. 3 3
141 49.87 radiation 1.0 270 < th dose dependent rect. 18 9
143 49.88 wind 9.0 270 < th dose dependent rect. 1 6
144 49.88 humidity 50.0 270 > th dose dependent rect. 1 6
145 49.89 radiation 1.0 270 < th dose independent rect. 18 9
161 49.98 radiation 40.0 270 < th dose independent rect. 15 16
172 50.03 wind 7.0 270 < th dose independent rect. 19 7
175 50.06 wind 9.0 270 < th dose independent rect. 6 21
176 50.07 atmosphere 995.0 270 > th dose independent rect. 7 18
185 50.10 temperature 15.0 270 > th dose independent rect. 2 17
200 50.16 humidity 50.0 270 > th dose independent rect. 7 7
206 50.18 precipitation 0.1 270 < th dose independent rect. 19 7
207 50.18 wind 9.0 270 < th dose independent rect. 14 17
209 50.18 precipitation 0.1 270 < th dose dependent rect. 19 7
219 50.21 atmosphere 995.0 270 > th dose dependent rect. 19 7
220 50.22 radiation 40.0 90 < th dose dependent rect. 3 8
221 50.23 temperature 10.0 270 > th dose independent rect. 19 7
232 50.23 atmosphere 1015.0 270 < th dose independent rect. 2 17
245 50.27 precipitation 0.1 270 < th dose independent rect. 3 3
246 50.27 precipitation 0.1 270 < th dose dependent rect. 3 3
270 50.31 radiation 20.0 90 < th dose independent rect. 3 19
281 50.35 temperature 10.0 10 > th dose dependent rect. 3 6
293 50.41 radiation 1.0 270 > th dose independent rect. 7 7
314 50.45 precipitation 0.1 270 < th dose independent rect. 12 9
318 50.45 precipitation 0.1 270 < th dose dependent rect. 12 9
319 50.46 wind 5.0 270 < th dose independent rect. 3 3
328 50.48 radiation 20.0 90 < th dose independent rect. 16 17
346 50.52 atmosphere 1015.0 270 < th dose independent rect. 7 18
349 50.53 precipitation 0.1 10 < th dose independent rect. 3 6
351 50.53 precipitation 0.1 10 < th dose dependent rect. 3 6
353 50.55 temperature 10.0 270 > th dose independent rect. 3 3
355 50.55 temperature 30.0 270 < th dose independent rect. 3 3
356 50.55 humidity 50.0 270 > th dose independent rect. 3 3
359 50.55 atmosphere 995.0 270 > th dose independent rect. 3 3
360 50.55 atmosphere 1015.0 270 < th dose independent rect. 3 3
365 50.55 temperature 10.0 270 > th dose independent rect. 6 21
368 50.56 wind 1.0 270 > th dose independent rect. 12 9
369 50.56 wind 9.0 270 < th dose independent rect. 21 15
378 50.58 atmosphere 995.0 270 > th dose independent rect. 14 17
385 50.60 humidity 50.0 270 > th dose dependent rect. 3 3
393 50.62 temperature 10.0 270 > th dose independent rect. 12 9
395 50.62 temperature 10.0 270 > th dose independent rect. 21 15
396 50.62 atmosphere 995.0 270 > th dose independent rect. 21 15
406 50.63 wind 9.0 270 < th dose dependent rect. 7 18
422 50.67 humidity 50.0 270 > th dose independent rect. 21 15
425 50.67 temperature 10.0 270 > th dose dependent rect. 12 8
439 50.70 atmosphere 1015.0 270 < th dose independent rect. 12 8
470 50.73 wind 1.0 270 > th dose independent rect. 19 7
474 50.73 atmosphere 1015.0 90 < th dose independent rect. 9 18
484 50.76 wind 1.0 270 > th dose independent rect. 1 6
488 50.77 atmosphere 1000.0 10 > th dose independent rect. 22 6
492 50.77 radiation 40.0 90 < th dose independent rect. 3 19
493 50.77 wind 9.0 270 < th dose dependent rect. 3 3
508 50.78 precipitation 0.1 10 < th dose independent rect. 9 18
510 50.78 precipitation 0.1 10 < th dose dependent rect. 9 18
524 50.80 precipitation 0.1 270 < th dose independent rect. 20 16
525 50.80 wind 9.0 10 < th dose independent rect. 9 18
530 50.80 precipitation 0.1 270 < th dose dependent rect. 20 16
532 50.81 wind 1.0 270 > th dose independent rect. 8 17
533 50.81 wind 9.0 270 < th dose independent rect. 2 17
562 50.85 radiation 40.0 90 < th dose dependent rect. 3 19
573 50.87 temperature 10.0 30 > th dose dependent rect. 4 18
594 50.89 radiation 40.0 90 < th dose dependent rect. 15 18
634 50.93 wind 1.0 270 > th dose independent rect. 7 7
641 50.95 wind 1.0 30 > th dose independent rect. 12 10
665 50.99 atmosphere 1000.0 30 > th dose independent rect. 12 10
684 51.01 radiation 40.0 10 < th dose dependent rect. 4 18
690 51.03 radiation 40.0 90 < th dose dependent rect. 3 16
702 51.04 atmosphere 1000.0 10 > th dose independent rect. 20 8
704 51.04 radiation 40.0 270 < th dose independent rect. 1 18
709 51.05 atmosphere 995.0 270 > th dose independent rect. 2 17
710 51.05 wind 9.0 270 < th dose dependent rect. 19 6
732 51.07 precipitation 0.1 270 < th dose independent rect. 6 21
734 51.07 precipitation 0.1 270 < th dose dependent rect. 6 21
776 51.09 atmosphere 995.0 90 > th dose dependent rect. 3 6
785 51.12 atmosphere 1010.0 30 < th dose independent rect. 12 10
795 51.14 temperature 10.0 1440 > th dose independent rect. 13 10
799 51.14 temperature 10.0 1440 > th dose independent rect. 23 14
802 51.14 atmosphere 995.0 1440 > th dose independent rect. 23 14
803 51.14 radiation 20.0 90 < th dose independent rect. 12 21
818 51.16 atmosphere 1000.0 270 > th dose independent rect. 12 8
834 51.18 radiation 40.0 10 < th dose independent rect. 16 17
837 51.18 radiation 40.0 270 < th dose dependent rect. 1 17
848 51.20 temperature 10.0 30 > th dose independent rect. 12 10
851 51.20 temperature 10.0 30 > th dose independent rect. 22 14
852 51.20 atmosphere 995.0 30 > th dose independent rect. 22 14
892 51.24 wind 9.0 30 < th dose independent rect. 22 14
915 51.28 wind 9.0 270 < th dose independent rect. 12 8
918 51.28 precipitation 0.1 30 < th dose independent rect. 12 10
920 51.28 precipitation 0.1 10 < th dose independent rect. 16 17
925 51.28 precipitation 0.1 30 < th dose dependent rect. 12 10
927 51.28 precipitation 0.1 10 < th dose dependent rect. 16 17
946 51.31 radiation 10.0 270 < th dose dependent rect. 2 13
959 51.33 temperature 10.0 10 > th dose independent rect. 9 7
961 51.33 atmosphere 1015.0 10 < th dose independent rect. 9 7
962 51.33 precipitation 0.1 10 < th dose independent rect. 9 7
963 51.33 temperature 10.0 10 > th dose independent rect. 16 17
968 51.33 atmosphere 995.0 10 > th dose dependent rect. 22 6
975 51.33 precipitation 0.1 10 < th dose dependent rect. 9 7
995 51.37 temperature 10.0 30 > th dose dependent rect. 12 10