Os07g0580700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os07g0580700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 135.52 | 0.547 | 2.97 | -0.184 | 0.408 | 0.284 | -1.21 | -1.29 | -0.0196 | 11.2 | 9.901 | 71 | -- | -- |
| 138.11 | 0.547 | 2.97 | -0.224 | 0.387 | 0.281 | -0.00273 | -- | -0.0167 | 10.9 | 9.725 | 76 | -- | -- |
| 137.16 | 0.545 | 2.96 | -0.169 | 0.408 | 0.257 | -- | -0.449 | -0.00522 | 11.1 | 9.73 | 70 | -- | -- |
| 137.85 | 0.547 | 2.96 | -0.134 | 0.381 | 0.237 | -- | -- | -0.0138 | 10.4 | 9.89 | 76 | -- | -- |
| 140.06 | 0.554 | 2.97 | -0.156 | -- | -0.00299 | -- | -0.456 | -0.0142 | -- | 21 | 33 | -- | -- |
| 138.79 | 0.552 | 2.97 | -0.15 | 0.203 | -- | 0.173 | -- | -0.0193 | 7.85 | -- | -- | -- | -- |
| 138.87 | 0.552 | 2.97 | -0.145 | 0.203 | -- | -- | -- | -0.0196 | 7.83 | -- | -- | -- | -- |
| 139.81 | 0.551 | 2.97 | -0.107 | -- | 0.0911 | -- | -- | -0.035 | -- | 20.03 | 700 | -- | -- |
| 138.48 | 0.548 | 2.96 | -- | 0.35 | 0.202 | -- | -- | -0.00419 | 10.2 | 9.961 | 77 | -- | -- |
| 141.12 | 0.555 | 2.97 | -0.143 | -- | -- | -- | -- | -0.0167 | -- | -- | -- | -- | -- |
| 139.43 | 0.552 | 2.96 | -- | 0.202 | -- | -- | -- | -0.00337 | 7.88 | -- | -- | -- | -- |
| 138.95 | 0.549 | 2.96 | -- | -- | 0.26 | -- | -- | 0.0304 | -- | 20 | 692 | -- | -- |
| 141.66 | 0.556 | 2.97 | -- | -- | -- | -- | -- | -0.000887 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 121.95 | wind | 9.0 | 10 | > th | dose independent | rect. | 13 | 1 |
| 13 | 121.95 | wind | 9.0 | 10 | > th | dose dependent | rect. | 13 | 1 |
| 40 | 123.29 | radiation | 10.0 | 90 | < th | dose independent | rect. | 11 | 2 |
| 41 | 123.48 | humidity | 80.0 | 30 | < th | dose independent | rect. | 1 | 1 |
| 48 | 123.48 | humidity | 80.0 | 30 | < th | dose dependent | rect. | 1 | 1 |
| 61 | 123.55 | wind | 3.0 | 10 | < th | dose dependent | rect. | 12 | 1 |
| 63 | 123.68 | precipitation | 0.1 | 1440 | > th | dose independent | rect. | 12 | 1 |
| 65 | 123.68 | precipitation | 0.1 | 1440 | > th | dose dependent | rect. | 12 | 1 |
| 76 | 124.44 | wind | 1.0 | 1440 | < th | dose independent | rect. | 17 | 1 |
| 77 | 124.50 | wind | 1.0 | 1440 | < th | dose dependent | rect. | 17 | 1 |
| 78 | 124.75 | wind | 1.0 | 1440 | > th | dose independent | rect. | 17 | 1 |
| 80 | 125.55 | radiation | 10.0 | 90 | < th | dose dependent | rect. | 11 | 1 |
| 124 | 127.61 | wind | 3.0 | 10 | < th | dose independent | rect. | 12 | 1 |
| 145 | 129.24 | atmosphere | 1005.0 | 10 | > th | dose dependent | rect. | 1 | 1 |
| 151 | 129.41 | radiation | 10.0 | 10 | < th | dose independent | rect. | 14 | 1 |
| 202 | 131.75 | atmosphere | 1005.0 | 10 | > th | dose independent | rect. | 1 | 1 |
| 210 | 131.89 | atmosphere | 1000.0 | 10 | < th | dose dependent | rect. | 11 | 1 |
| 237 | 132.20 | temperature | 20.0 | 90 | < th | dose independent | rect. | 1 | 1 |
| 239 | 132.20 | wind | 9.0 | 270 | > th | dose dependent | rect. | 1 | 13 |
| 271 | 132.40 | wind | 1.0 | 1440 | < th | dose dependent | rect. | 17 | 3 |
| 282 | 132.46 | wind | 9.0 | 270 | > th | dose independent | rect. | 1 | 13 |
| 307 | 132.64 | atmosphere | 1000.0 | 90 | < th | dose independent | rect. | 10 | 1 |
| 308 | 132.66 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 11 | 1 |
| 360 | 133.01 | wind | 9.0 | 14400 | > th | dose independent | rect. | 1 | 1 |
| 363 | 133.01 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 1 | 1 |
| 381 | 133.08 | radiation | 10.0 | 10 | < th | dose dependent | rect. | 14 | 1 |
| 386 | 133.11 | radiation | 10.0 | 90 | < th | dose independent | rect. | 10 | 17 |
| 427 | 133.31 | radiation | 10.0 | 90 | < th | dose independent | rect. | 10 | 20 |
| 532 | 133.83 | wind | 9.0 | 270 | > th | dose dependent | sin | 6 | NA |
| 600 | 134.08 | wind | 9.0 | 270 | > th | dose independent | sin | 6 | NA |
| 613 | 134.15 | radiation | 10.0 | 90 | < th | dose independent | rect. | 24 | 15 |
| 621 | 134.18 | wind | 9.0 | 270 | < th | dose independent | sin | 6 | NA |
| 637 | 134.24 | wind | 9.0 | 90 | < th | dose dependent | rect. | 2 | 22 |
| 672 | 134.37 | temperature | 30.0 | 90 | > th | dose dependent | rect. | 10 | 1 |
| 678 | 134.42 | wind | 3.0 | 10 | < th | dose independent | rect. | 1 | 1 |
| 683 | 134.44 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 1 | 1 |
| 686 | 134.45 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 1 | 2 |
| 700 | 134.54 | humidity | 60.0 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 705 | 134.56 | wind | 1.0 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 717 | 134.62 | wind | 7.0 | 90 | < th | dose independent | rect. | 2 | 22 |
| 722 | 134.64 | wind | 1.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 732 | 134.68 | wind | 1.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 745 | 134.70 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 24 | 14 |
| 757 | 134.74 | humidity | 60.0 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 781 | 134.81 | wind | 9.0 | 10 | < th | dose independent | rect. | 2 | 23 |
| 801 | 134.87 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 805 | 134.87 | wind | 1.0 | 14400 | < th | dose dependent | rect. | 4 | 1 |
| 816 | 134.91 | atmosphere | 1005.0 | 90 | > th | dose independent | rect. | 24 | 14 |
| 822 | 134.92 | humidity | 60.0 | 43200 | < th | dose independent | rect. | 2 | 6 |
| 824 | 134.92 | atmosphere | 1005.0 | 10 | > th | dose independent | rect. | 24 | 15 |
| 840 | 134.97 | temperature | 30.0 | 90 | < th | dose independent | rect. | 24 | 15 |
| 844 | 134.98 | humidity | 60.0 | 43200 | > th | dose independent | rect. | 2 | 6 |
| 846 | 134.98 | wind | 3.0 | 90 | < th | dose dependent | rect. | 10 | 14 |
| 872 | 135.04 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 892 | 135.06 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 894 | 135.06 | wind | 3.0 | 90 | < th | dose dependent | rect. | 7 | 17 |
| 910 | 135.09 | wind | 1.0 | 43200 | < th | dose independent | rect. | 8 | 1 |
| 914 | 135.10 | wind | 1.0 | 14400 | < th | dose independent | rect. | 4 | 1 |
| 927 | 135.11 | humidity | 50.0 | 90 | > th | dose independent | rect. | 24 | 14 |
| 930 | 135.11 | wind | 7.0 | 30 | < th | dose dependent | rect. | 10 | 15 |
| 937 | 135.13 | radiation | 10.0 | 270 | < th | dose independent | rect. | 21 | 17 |
| 941 | 135.13 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 4 | 14 |
| 949 | 135.15 | humidity | 90.0 | 1440 | > th | dose independent | rect. | 10 | 1 |
| 964 | 135.16 | precipitation | 0.1 | 1440 | < th | dose independent | rect. | 8 | 4 |
| 969 | 135.16 | precipitation | 0.1 | 1440 | < th | dose dependent | rect. | 8 | 4 |
| 970 | 135.17 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 973 | 135.17 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 6 | 1 |