BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os07g0580700 Os07g0580700|AK119427
(1030 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G52780.1 | chr1:19658846-19662025 FORWARD LENGTH=1060 464 e-131
AT4G21700.1 | chr4:11529956-11532844 FORWARD LENGTH=963 70 6e-12
>AT1G52780.1 | chr1:19658846-19662025 FORWARD LENGTH=1060
Length = 1059
Score = 464 bits (1195), Expect = e-131, Method: Compositional matrix adjust.
Identities = 336/1024 (32%), Positives = 500/1024 (48%), Gaps = 98/1024 (9%)
Query: 36 SYLRFADVKRQCRSVLTSASELA--DNAYRVKRVKRELSFEKGDWRQDAGTDPLVPFDGG 93
SY R DVK++C+SVL+SASEL D + ++ KR L F GDW QD+G P++PFD
Sbjct: 51 SYDRINDVKKKCKSVLSSASELKLEDISRTPRKSKRNLGFRYGDWNQDSGDSPILPFDST 110
Query: 94 DAAEDGRRPPLDPLRLATFVVTHVDDDDERRARNAVNVSGLLVLTISRTSASPEIGYHVP 153
+ R P+ L +F VT D D R + + V+G+L+L I+ S P + +
Sbjct: 111 NTL---RNSSTKPMNLVSFSVT--DLDLPHRTKKYIGVNGVLLLAITMFSELPSLRSY-- 163
Query: 154 VVSSPVFELLPGSTKLRIVFEGVYTEAARSGNGGGERVLCMVGAGVLPTRG-ADGADPWG 212
FEL P T+L+I F+G+Y E N ERVLCM+G +LP+R +D ++PW
Sbjct: 164 --GLREFELWPSHTQLKISFQGIYVE-----NDDDERVLCMLGETMLPSRDESDSSNPWK 216
Query: 213 WAKNSGRAGFQPPVATDESMLLVLRYPKELTLTTRAVVGEMRSTRAMSDAAYFDTVKLVS 272
W K PP+ D+ +LL+LRYPK TLT R + GE+ S FD + L S
Sbjct: 217 WVKEHD----TPPLLQDDMILLLLRYPKSFTLTKRVIQGELTSLNQKPSLKLFDKIHLFS 272
Query: 273 GPTWNRQYEFRRPEELAAAAGTCRPLTSSDD----GGNRARDLYKGRHLCDVLERYIHGV 328
+ +Y+F + ++ A C P +D G+ ++YK + CD+L+R +
Sbjct: 273 QLGKSVRYDFVSNDLVSKA---CDPYPYKNDTFTSSGSGGINVYKEKGFCDLLQRVTNRA 329
Query: 329 -ITARPTWRHCNST----ATGAPCPFEMD-RAEDAAI--VGIVLHDLRCLGYDLDMAGNP 380
+T P W+ C+ T + P F+ D ++ D + V + + ++ C + +
Sbjct: 330 PLTVVPNWK-CHGTDEYCSKLGPFAFDKDIKSTDGSFKDVKLYMQNVHC-EETAARSQSD 387
Query: 381 GGVKVSVVFRALSPREHWYTAVQRTALSGATLSAEGVWNASAGEVSMVACRGIGGKACHF 440
KVS VFRA+ P E+ Y + R+ + T++AEG+W S+G++ MV CR C+
Sbjct: 388 AVTKVSAVFRAVHPNENLYISGMRSGIDNMTVTAEGIWKPSSGQLCMVGCRRGQVDGCNA 447
Query: 441 RVCLSFPATFSITGRDMMLGEITTVDVNETGGGARSSLSFRQRMPPPRLQRCVSGILPVV 500
R+CL P TFSI R +++G + ++ + + LSF + + P +Q
Sbjct: 448 RICLYIPTTFSIRQRSILVGTFSCLNTEKNLTPSFFPLSFEKLVEPMDMQNYFHSSASHP 507
Query: 501 YRYNYTKVKLAGEFLRRNSSPSDLREIIARSLPLSYPNCGGNGDGKRSLADLADRLTLRF 560
+ Y+Y+K+ AG L RN S II +S+ + +P + D SL+ LA+ LT
Sbjct: 508 F-YSYSKLDDAGAILERNEEFS-FGTIIKKSV-MHFPKLEDSDDLLSSLSLLAEDLT--- 561
Query: 561 TAMPSLFSPPGWMERPV----LHLEVFFLGQLIERFMPASD----DATT--RSSAIPGDE 610
F P + E+ ++V LG L F S+ D TT R+ A
Sbjct: 562 ------FHTPAFTEKRASGTNFGMDVLSLGPLFGLFWRTSNFSIADQTTPYRTKA----- 610
Query: 611 PCLQEQRLLNVSAELTIFGDLRVASSAMSLEGVYDREDGRMYLIGCRDVHHLPWXXXXXX 670
++Q LLNVS ++++ G+ S + LEG+YD G+MYL+GCRDV W
Sbjct: 611 EYTEKQLLLNVSGQISLTGENFGNFSVLYLEGLYDEHVGKMYLVGCRDVRA-SW--KILF 667
Query: 671 XXXXXXXGMDCSIEVKVEYPPPTTHWFVRSTARVQIASTRVAGDDPLHFDTVKLRAQPVR 730
G+DC I+V V YPP + W TA+V I+S R DDPL+F +KL+ P+
Sbjct: 668 ESPDLEAGLDCLIDVVVSYPPIKSRWLADPTAKVSISSNR-PEDDPLYFKPIKLKTTPIF 726
Query: 731 YPRRWPDFVSRAIVDSXXXXXXXXXXXXXXXXQLHHLKHHADVAPYVSLVMLGVQALGLV 790
Y R+ D +SRA V+ L ++ + D P+VSLVMLGVQALG
Sbjct: 727 YRRQREDILSRAGVEGILRVLTLTFSIGCITSLLFYVSSNTDSLPFVSLVMLGVQALGYS 786
Query: 791 MPLFAGMEALLARVTVQPELDTTRPLPPPGSSYMLDYNPPYQAVDRTAKILAVAEFLLTL 850
+PL G EAL R TT P SY L + + +D T K+L + FLLTL
Sbjct: 787 LPLITGAEALFKRKAASA---TTYETP----SYDLQRSQWFNVIDYTVKLLVMVCFLLTL 839
Query: 851 CIAWKVXXXXXXXXXXXPGEAARVPSDGKVFVYCXXXXXXXXXXXXXXXXXR-------- 902
+ KV P E +VPSD +V + R
Sbjct: 840 RLCQKVWKSRARLLTRTPQEPHKVPSDRRVLLVVLILHALGYIVALIRHPARADRLVGGS 899
Query: 903 ---------DATVEQHVGLMQDMFLLPQVIGNAAWSVNCK-PLAGSFYVGITAARLLPRV 952
E+++GL+QD FLLPQVI NA W ++ + PL +Y GIT RL P
Sbjct: 900 YGSNASNWWQTETEEYIGLVQDFFLLPQVIANAMWQIDSRQPLRKLYYFGITLVRLFPHA 959
Query: 953 YDLVRPTPVADVFSDDVHASATASAISREGFFPRAGDVVMPLAAVSLAGAVFVQQRWNYA 1012
YD + + F + H + FF + GD+ +P+ A+ LA VFVQQRW+Y
Sbjct: 960 YDYIVGSVPDPYFIGEEHEFVNPNF----DFFSKFGDIAIPVTAILLAVIVFVQQRWDYD 1015
Query: 1013 IVSR 1016
+S+
Sbjct: 1016 KLSQ 1019
>AT4G21700.1 | chr4:11529956-11532844 FORWARD LENGTH=963
Length = 962
Score = 70.1 bits (170), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 139/659 (21%), Positives = 239/659 (36%), Gaps = 125/659 (18%)
Query: 178 TEAARSGNGGGERVLCMVGAGVLPTRGADGADPWG---------WAKNSGRA---GFQPP 225
T A+ S GG G L DG WG W++++G+ G
Sbjct: 140 TSASSSYYGGD------FGQKKLQVMQIDGRSSWGGASFDFYGFWSESTGQVCMVGSTQV 193
Query: 226 VATDESML------LVLRYPKELTLTTRAVVGEMRSTRAMSDAAYFDTVKLVSGPTWNRQ 279
++ + + L L+L Y KE + V G + S ++S+ F TV ++
Sbjct: 194 LSVEGTRLKIFDARLMLNYSKESNIYGSLVKGVLESVDSLSE---FKTVLILGARNTPLN 250
Query: 280 YEFRRPEELAAAAGTCRPLTSSDDGGNRARDLYKGRHLCDVLE--RYIHGVITARPTWRH 337
YE++ E+ G +GG +C V E ++ G++ +
Sbjct: 251 YEYKLLEQSKLDCGV--------NGGESLSLENVLGGMCKVFEGRSHVFGLM-------Y 295
Query: 338 CNSTATGAPC-PFEMDRAEDAAIVGIVLHDLRCLGYDLDMAGNPGGVKVSVVFRALSPRE 396
N C PF D + ++ C G + M + F +S
Sbjct: 296 RNDCGVDHSCSPFGSDVEYTPGFMSML--SFLCDGEKMRML---------LSFSNMSGYS 344
Query: 397 HWYTAVQRTALSGATLSAEGVWNASAGEVSMVACRGIGGKA---------CHFRVCLSFP 447
+ RT +L AEG W+ VACR + C R+ L FP
Sbjct: 345 SLFPFDPRT-----SLVAEGSWDVERNRFCGVACRILNFSDSLSNAVVDDCSLRLSLRFP 399
Query: 448 ATFSITGRDMMLGEITTVDVNETGGGARSSLSFRQRMPPPRLQRCVSGILPVVYRYNYTK 507
A SI ++GE+ + A S S+ +R+ L + + RY YT+
Sbjct: 400 AILSIKSMAPVVGELWSAQ-------AESDPSYFRRIEFSSLNDQLWRFPSL--RYEYTE 450
Query: 508 VKLAGEFLRRNSSPSDLREIIARSLPLSYPNCG-GNGDGKRSLADLADRLT--LRFTAMP 564
+ G+ CG G KR D T +RF M
Sbjct: 451 SERVGKL------------------------CGAGKSRPKRKGNHYPDAQTSDMRF-VMS 485
Query: 565 SLFSPPGWMERPVLHLEVFFLGQLIERFMPASDDATTRSSAIPGDEPCLQEQRLLNVSAE 624
+S G + R +F+G + R + + IP + + + N++
Sbjct: 486 VKYSGEGNVLRTA-RASPYFVGDRLYRDLLVRGQGVGLT-GIPMNVNSVTKS-FTNITYR 542
Query: 625 LTIFGDLRVASSAMSLEGVYDREDGRMYLIGCRDVHHLPWXXXXXXXXXXXXXGMDCSIE 684
+ + + EG YDR+ G + ++GC+ V +DCS+
Sbjct: 543 IRSLNPNSESRGDIYAEGTYDRDTGELCMVGCQSVR-------LKNTVAIQNETVDCSLA 595
Query: 685 VKVEYPPPTTHWFVRSTARVQ--IASTRVAGDDPLHFDTVKLRAQPVRYPRRWPDFVSRA 742
+K+ + P + RS R++ I STR DPL+ +++ ++ + Y + + V R
Sbjct: 596 IKINFSPIDS----RSDDRLKGTIKSTR-EKTDPLYVGRMEVLSRSI-YVHQAKESVWRM 649
Query: 743 IVDSXXXXXXXXXXXXXXXXQLHHLKHHADVAPYVSLVMLGVQALGLVMPLFAGMEALL 801
++ QL+H+K H + P++S+ ML + LG ++PL E L
Sbjct: 650 DLEVAMVLVSNTLSCLFLGMQLYHMKQHQEALPFISVAMLILITLGHMIPLLLNFEELF 708
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 53/104 (50%), Gaps = 5/104 (4%)
Query: 906 VEQHVGLMQDMFLLPQVIGNAAWSVNCKPLAGSFYVGITAARLLPRVYDLVRPTPVADVF 965
++ + GLM D FLLPQ++ N + + KPLA FYVG + RLLP YDL R +
Sbjct: 830 LKSYGGLMLDAFLLPQILFNGFSNSDLKPLAALFYVGNSFVRLLPHAYDLYRSHSYGKIL 889
Query: 966 SDDVHASATASAISREGFFPRAGDVVMPLAAVSLAGAVFVQQRW 1009
+ A + ++ A D+++ A +F+QQR+
Sbjct: 890 D-----WSFIYANHKMDYYSTAWDIIILCIGFLFAFLIFLQQRF 928
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.322 0.136 0.420
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 21,779,160
Number of extensions: 911584
Number of successful extensions: 1726
Number of sequences better than 1.0e-05: 2
Number of HSP's gapped: 1706
Number of HSP's successfully gapped: 4
Length of query: 1030
Length of database: 11,106,569
Length adjustment: 109
Effective length of query: 921
Effective length of database: 8,118,225
Effective search space: 7476885225
Effective search space used: 7476885225
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 117 (49.7 bits)