Os07g0571500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os07g0571500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 37.55 | 0.288 | 8.97 | 0.172 | 0.709 | 0.336 | -0.193 | 0.651 | -0.108 | 4.53 | 68 | 2649 | -- | -- |
| 38.07 | 0.287 | 8.98 | 0.15 | 0.71 | 0.389 | -0.158 | -- | -0.0976 | 4.55 | 68.37 | 2627 | -- | -- |
| 37.65 | 0.286 | 8.97 | 0.173 | 0.709 | 0.337 | -- | 0.627 | -0.108 | 4.53 | 68 | 2647 | -- | -- |
| 38.14 | 0.288 | 8.98 | 0.152 | 0.709 | 0.387 | -- | -- | -0.0995 | 4.54 | 68.49 | 2625 | -- | -- |
| 64.02 | 0.373 | 8.98 | 0.192 | -- | 0.444 | -- | 0.668 | -0.0743 | -- | 69.4 | 2649 | -- | -- |
| 42.1 | 0.304 | 9 | 0.213 | 0.739 | -- | -0.0883 | -- | -0.184 | 4.33 | -- | -- | -- | -- |
| 42.13 | 0.304 | 9 | 0.214 | 0.739 | -- | -- | -- | -0.184 | 4.32 | -- | -- | -- | -- |
| 62.55 | 0.37 | 9.01 | 0.26 | -- | -0.613 | -- | -- | -0.194 | -- | 81 | 2650 | -- | -- |
| 38.74 | 0.29 | 8.98 | -- | 0.715 | 0.398 | -- | -- | -0.115 | 4.51 | 68.99 | 2620 | -- | -- |
| 71.51 | 0.395 | 9 | 0.243 | -- | -- | -- | -- | -0.164 | -- | -- | -- | -- | -- |
| 43.33 | 0.308 | 9.01 | -- | 0.743 | -- | -- | -- | -0.208 | 4.32 | -- | -- | -- | -- |
| 64.34 | 0.375 | 9.02 | -- | -- | -0.605 | -- | -- | -0.222 | -- | 81 | 2650 | -- | -- |
| 73.07 | 0.399 | 9.01 | -- | -- | -- | -- | -- | -0.191 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 34.10 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 21 | 17 |
| 15 | 34.77 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 6 | 8 |
| 21 | 34.99 | humidity | 50.0 | 270 | > th | dose independent | rect. | 6 | 8 |
| 39 | 35.25 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 8 | 7 |
| 52 | 35.36 | humidity | 50.0 | 270 | > th | dose independent | rect. | 8 | 17 |
| 53 | 35.38 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 14 | 16 |
| 55 | 35.38 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 14 | 16 |
| 57 | 35.42 | humidity | 50.0 | 90 | > th | dose independent | rect. | 21 | 17 |
| 58 | 35.42 | temperature | 15.0 | 90 | > th | dose dependent | rect. | 8 | 6 |
| 67 | 35.53 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 1 | 9 |
| 81 | 35.67 | radiation | 40.0 | 10 | < th | dose independent | rect. | 3 | 18 |
| 83 | 35.67 | wind | 9.0 | 270 | < th | dose dependent | rect. | 6 | 8 |
| 87 | 35.69 | radiation | 20.0 | 270 | < th | dose independent | rect. | 1 | 9 |
| 90 | 35.71 | wind | 7.0 | 270 | < th | dose independent | rect. | 6 | 8 |
| 91 | 35.71 | humidity | 50.0 | 270 | > th | dose independent | rect. | 6 | 20 |
| 92 | 35.71 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 18 | 8 |
| 115 | 35.82 | temperature | 15.0 | 270 | > th | dose independent | rect. | 6 | 8 |
| 119 | 35.84 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 8 |
| 121 | 35.84 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 8 |
| 124 | 35.86 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 6 | 8 |
| 125 | 35.86 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 6 | 8 |
| 126 | 35.86 | temperature | 10.0 | 270 | > th | dose independent | rect. | 14 | 16 |
| 130 | 35.87 | wind | 9.0 | 270 | < th | dose independent | rect. | 14 | 16 |
| 131 | 35.87 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 2 | 17 |
| 132 | 35.87 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 2 | 17 |
| 136 | 35.88 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 1 | 8 |
| 143 | 35.91 | wind | 9.0 | 270 | < th | dose dependent | rect. | 8 | 17 |
| 165 | 35.97 | humidity | 50.0 | 270 | > th | dose independent | rect. | 5 | 22 |
| 170 | 35.98 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 3 | 8 |
| 180 | 36.02 | humidity | 50.0 | 270 | > th | dose independent | rect. | 19 | 19 |
| 182 | 36.03 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 9 | 5 |
| 187 | 36.04 | temperature | 20.0 | 90 | > th | dose independent | rect. | 21 | 17 |
| 189 | 36.05 | radiation | 30.0 | 90 | < th | dose independent | rect. | 3 | 8 |
| 194 | 36.06 | humidity | 60.0 | 90 | > th | dose dependent | rect. | 21 | 6 |
| 205 | 36.09 | radiation | 40.0 | 270 | < th | dose independent | rect. | 14 | 16 |
| 206 | 36.09 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 19 | 7 |
| 213 | 36.12 | radiation | 30.0 | 90 | < th | dose independent | rect. | 3 | 18 |
| 214 | 36.13 | temperature | 30.0 | 270 | < th | dose independent | rect. | 18 | 8 |
| 216 | 36.14 | radiation | 1.0 | 270 | > th | dose independent | rect. | 6 | 8 |
| 226 | 36.16 | temperature | 25.0 | 270 | < th | dose independent | rect. | 1 | 8 |
| 231 | 36.17 | wind | 1.0 | 270 | > th | dose independent | rect. | 14 | 16 |
| 236 | 36.19 | humidity | 60.0 | 270 | > th | dose independent | rect. | 18 | 8 |
| 244 | 36.21 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 14 | 7 |
| 247 | 36.21 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 14 | 7 |
| 250 | 36.22 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 21 | 6 |
| 262 | 36.24 | radiation | 1.0 | 270 | < th | dose independent | rect. | 18 | 8 |
| 270 | 36.26 | temperature | 20.0 | 270 | > th | dose independent | rect. | 19 | 7 |
| 285 | 36.28 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 18 | 8 |
| 287 | 36.29 | temperature | 10.0 | 270 | > th | dose independent | rect. | 19 | 7 |
| 290 | 36.29 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 19 | 7 |
| 297 | 36.29 | temperature | 10.0 | 270 | > th | dose independent | rect. | 2 | 17 |
| 298 | 36.29 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 2 | 17 |
| 309 | 36.30 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 7 |
| 310 | 36.30 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 7 |
| 314 | 36.32 | wind | 9.0 | 270 | < th | dose independent | rect. | 19 | 7 |
| 340 | 36.35 | radiation | 40.0 | 10 | < th | dose dependent | rect. | 3 | 18 |
| 362 | 36.39 | temperature | 20.0 | 270 | > th | dose independent | rect. | 20 | 5 |
| 371 | 36.39 | temperature | 30.0 | 90 | < th | dose dependent | rect. | 3 | 6 |
| 378 | 36.40 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 19 | 7 |
| 381 | 36.40 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 19 | 7 |
| 385 | 36.41 | wind | 7.0 | 270 | < th | dose independent | rect. | 1 | 7 |
| 407 | 36.44 | temperature | 20.0 | 10 | > th | dose independent | rect. | 21 | 7 |
| 419 | 36.46 | wind | 9.0 | 270 | < th | dose independent | rect. | 8 | 17 |
| 423 | 36.46 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 21 | 7 |
| 431 | 36.48 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 9 | 2 |
| 458 | 36.51 | wind | 9.0 | 270 | < th | dose independent | rect. | 2 | 17 |
| 467 | 36.52 | wind | 9.0 | 90 | < th | dose independent | rect. | 21 | 17 |
| 474 | 36.53 | wind | 1.0 | 270 | > th | dose independent | rect. | 13 | 7 |
| 480 | 36.53 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 9 | 1 |
| 486 | 36.53 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 3 | 18 |
| 497 | 36.54 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 21 | 6 |
| 499 | 36.54 | temperature | 10.0 | 270 | > th | dose independent | rect. | 1 | 7 |
| 502 | 36.54 | humidity | 50.0 | 270 | > th | dose independent | rect. | 1 | 7 |
| 504 | 36.54 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 1 | 7 |
| 505 | 36.54 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 1 | 7 |
| 511 | 36.54 | temperature | 10.0 | 270 | > th | dose independent | rect. | 8 | 17 |
| 512 | 36.54 | temperature | 20.0 | 10 | > th | dose independent | rect. | 21 | 17 |
| 521 | 36.54 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 21 | 6 |
| 536 | 36.56 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 14 | 16 |
| 543 | 36.57 | temperature | 10.0 | 90 | > th | dose independent | rect. | 21 | 6 |
| 544 | 36.57 | temperature | 30.0 | 90 | < th | dose independent | rect. | 21 | 6 |
| 545 | 36.57 | humidity | 50.0 | 90 | > th | dose independent | rect. | 21 | 6 |
| 548 | 36.57 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 21 | 6 |
| 549 | 36.57 | radiation | 1.0 | 90 | < th | dose independent | rect. | 21 | 6 |
| 554 | 36.57 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 3 | 6 |
| 571 | 36.57 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 21 | 6 |
| 576 | 36.57 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 3 | 6 |
| 590 | 36.59 | wind | 9.0 | 90 | < th | dose independent | rect. | 21 | 6 |
| 591 | 36.59 | humidity | 50.0 | 10 | > th | dose independent | rect. | 9 | 18 |
| 610 | 36.60 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 3 | 8 |
| 651 | 36.63 | radiation | 40.0 | 90 | < th | dose dependent | rect. | 3 | 16 |
| 654 | 36.64 | temperature | 10.0 | 90 | > th | dose independent | rect. | 14 | 7 |
| 658 | 36.64 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 14 | 7 |
| 660 | 36.64 | temperature | 10.0 | 90 | > th | dose independent | rect. | 21 | 17 |
| 661 | 36.64 | atmosphere | 995.0 | 90 | > th | dose independent | rect. | 21 | 17 |
| 673 | 36.65 | wind | 1.0 | 270 | > th | dose independent | rect. | 1 | 18 |
| 683 | 36.66 | wind | 3.0 | 270 | < th | dose independent | rect. | 7 | 18 |
| 690 | 36.66 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 3 | 18 |
| 691 | 36.67 | wind | 5.0 | 90 | < th | dose independent | rect. | 3 | 5 |
| 700 | 36.68 | radiation | 40.0 | 30 | < th | dose independent | rect. | 14 | 7 |
| 703 | 36.68 | wind | 9.0 | 270 | < th | dose dependent | rect. | 19 | 6 |
| 706 | 36.68 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 9 | 18 |
| 719 | 36.70 | precipitation | 0.1 | 90 | < th | dose independent | rect. | 3 | 5 |
| 725 | 36.70 | precipitation | 0.1 | 90 | < th | dose dependent | rect. | 3 | 5 |
| 732 | 36.71 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 15 | 7 |
| 739 | 36.71 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 22 | 17 |
| 743 | 36.71 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 3 | 2 |
| 772 | 36.74 | wind | 9.0 | 90 | < th | dose independent | rect. | 14 | 7 |
| 794 | 36.75 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 9 | 18 |
| 805 | 36.76 | wind | 5.0 | 10 | < th | dose independent | rect. | 3 | 6 |
| 830 | 36.77 | wind | 9.0 | 90 | < th | dose independent | rect. | 8 | 19 |
| 843 | 36.78 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 19 | 6 |
| 852 | 36.78 | wind | 9.0 | 10 | < th | dose dependent | rect. | 3 | 6 |
| 906 | 36.82 | wind | 9.0 | 90 | < th | dose dependent | rect. | 3 | 5 |
| 924 | 36.83 | atmosphere | 1015.0 | 90 | < th | dose independent | rect. | 21 | 6 |
| 960 | 36.84 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 2 | 17 |
| 967 | 36.84 | wind | 9.0 | 90 | < th | dose dependent | rect. | 21 | 6 |