Os07g0517300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF1032 family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os07g0517300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Protein of unknown function DUF1032 family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 137.88 | 0.552 | 7.08 | -2.24 | 0.0453 | -1.93 | 0.661 | -1.48 | -0.983 | 15.2 | 24.68 | 840 | -- | -- |
| 140.37 | 0.552 | 7.11 | -2.5 | 0.0565 | -1.77 | 0.609 | -- | -1.04 | 15.7 | 25.4 | 859 | -- | -- |
| 138.62 | 0.548 | 7.05 | -2.23 | 0.134 | -1.89 | -- | -1.41 | -0.936 | 18.8 | 24.42 | 856 | -- | -- |
| 140.43 | 0.552 | 7.11 | -2.47 | 0.153 | -1.74 | -- | -- | -1.02 | 19.3 | 24.94 | 900 | -- | -- |
| 139.36 | 0.55 | 7.08 | -2.26 | -- | -1.93 | -- | -1.33 | -0.982 | -- | 24.5 | 842 | -- | -- |
| 184.24 | 0.636 | 7.03 | -1.98 | 0.334 | -- | -0.109 | -- | -0.666 | 21.9 | -- | -- | -- | -- |
| 184.28 | 0.636 | 7.03 | -1.97 | 0.336 | -- | -- | -- | -0.665 | 21.8 | -- | -- | -- | -- |
| 141.35 | 0.554 | 7.11 | -2.48 | -- | -1.76 | -- | -- | -1.04 | -- | 25.41 | 852 | -- | -- |
| 280.27 | 0.78 | 7 | -- | 0.237 | -0.635 | -- | -- | -0.568 | 20.7 | 25.1 | 789 | -- | -- |
| 191.02 | 0.646 | 7.02 | -1.97 | -- | -- | -- | -- | -0.665 | -- | -- | -- | -- | -- |
| 286.7 | 0.792 | 6.98 | -- | 0.332 | -- | -- | -- | -0.446 | 21.4 | -- | -- | -- | -- |
| 283.32 | 0.784 | 7 | -- | -- | -0.725 | -- | -- | -0.584 | -- | 25.9 | 777 | -- | -- |
| 293.16 | 0.799 | 6.97 | -- | -- | -- | -- | -- | -0.447 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 132.92 | temperature | 25 | 720 | < th | dose dependent | sin | 6 | NA |
| 3 | 133.12 | temperature | 30 | 720 | < th | dose dependent | rect. | 23 | 9 |
| 5 | 133.40 | temperature | 25 | 720 | < th | dose dependent | rect. | 22 | 13 |
| 7 | 133.46 | temperature | 25 | 720 | < th | dose dependent | rect. | 22 | 16 |
| 8 | 133.47 | temperature | 15 | 720 | > th | dose dependent | rect. | 1 | 5 |
| 32 | 133.88 | temperature | 15 | 720 | > th | dose dependent | rect. | 2 | 3 |
| 44 | 134.28 | temperature | 25 | 720 | < th | dose dependent | rect. | 1 | 8 |
| 47 | 134.40 | temperature | 20 | 720 | > th | dose dependent | rect. | 24 | 9 |
| 59 | 134.51 | temperature | 15 | 720 | > th | dose dependent | sin | 8 | NA |
| 65 | 134.55 | temperature | 25 | 720 | < th | dose dependent | rect. | 3 | 6 |
| 71 | 134.62 | temperature | 30 | 720 | < th | dose dependent | rect. | 5 | 2 |
| 146 | 135.87 | temperature | 20 | 720 | > th | dose independent | rect. | 3 | 2 |
| 182 | 136.42 | temperature | 15 | 720 | > th | dose dependent | rect. | 21 | 15 |
| 199 | 136.75 | temperature | 20 | 720 | > th | dose independent | rect. | 2 | 4 |
| 238 | 137.17 | temperature | 10 | 720 | > th | dose dependent | rect. | 18 | 16 |
| 263 | 137.56 | temperature | 20 | 720 | < th | dose independent | rect. | 3 | 4 |
| 315 | 138.03 | temperature | 20 | 720 | < th | dose independent | rect. | 5 | 2 |
| 443 | 139.54 | temperature | 20 | 4320 | > th | dose dependent | rect. | 3 | 1 |
| 457 | 139.72 | temperature | 25 | 4320 | < th | dose dependent | rect. | 3 | 1 |
| 460 | 139.74 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 495 | 140.08 | temperature | 10 | 4320 | > th | dose dependent | rect. | 3 | 1 |
| 549 | 140.55 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 560 | 140.62 | temperature | 20 | 720 | > th | dose independent | rect. | 1 | 13 |
| 590 | 140.81 | temperature | 20 | 720 | > th | dose independent | rect. | 2 | 11 |
| 613 | 140.91 | temperature | 25 | 720 | < th | dose dependent | rect. | 3 | 23 |
| 663 | 141.15 | temperature | 20 | 4320 | > th | dose independent | rect. | 1 | 6 |
| 679 | 141.22 | temperature | 20 | 4320 | > th | dose independent | rect. | 3 | 4 |
| 684 | 141.24 | temperature | 20 | 4320 | < th | dose independent | rect. | 1 | 6 |
| 690 | 141.25 | temperature | 20 | 4320 | > th | dose dependent | rect. | 23 | 8 |
| 691 | 141.26 | temperature | 20 | 4320 | > th | dose independent | rect. | 3 | 2 |
| 713 | 141.33 | temperature | 20 | 4320 | < th | dose independent | rect. | 1 | 4 |
| 718 | 141.35 | temperature | 20 | 4320 | > th | dose independent | rect. | 21 | 10 |
| 791 | 141.52 | humidity | 70 | 43200 | > th | dose independent | rect. | 7 | 2 |
| 852 | 141.64 | temperature | 20 | 4320 | < th | dose independent | rect. | 20 | 11 |
| 910 | 141.78 | temperature | 15 | 1440 | > th | dose dependent | rect. | 18 | 12 |
| 972 | 141.90 | temperature | 20 | 4320 | > th | dose dependent | rect. | 23 | 1 |