BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os07g0517300 Os07g0517300|AK121812
         (633 letters)

Database: rap3 
           52,214 sequences; 17,035,801 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Os07g0517300  Protein of unknown function DUF1032 family pro...  1112   0.0  

>Os07g0517300 Protein of unknown function DUF1032 family protein
          Length = 633

 Score = 1112 bits (2875), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 550/633 (86%), Positives = 550/633 (86%)

Query: 1   EYLLRICSGEISGEDGAHSVNFAEAALLLQGSVQVYSRKVEYLYTLVLNALEFLSQKKQD 60
           EYLLRICSGEISGEDGAHSVNFAEAALLLQGSVQVYSRKVEYLYTLVLNALEFLSQKKQD
Sbjct: 1   EYLLRICSGEISGEDGAHSVNFAEAALLLQGSVQVYSRKVEYLYTLVLNALEFLSQKKQD 60

Query: 61  QENSSAQANESDRSTVPNEEDDVFSGLDDVPVEARTTLDNNIDRDDLLKKNVRPPANLLV 120
           QENSSAQANESDRSTVPNEEDDVFSGLDDVPVEARTTLDNNIDRDDLLKKNVRPPANLLV
Sbjct: 61  QENSSAQANESDRSTVPNEEDDVFSGLDDVPVEARTTLDNNIDRDDLLKKNVRPPANLLV 120

Query: 121 FEGDCMDXXXXXXXXXXXXTCGFFGDFLLLDPCDAPAVSDFLQGKQSAKEDIFXXXXXXX 180
           FEGDCMD            TCGFFGDFLLLDPCDAPAVSDFLQGKQSAKEDIF       
Sbjct: 121 FEGDCMDSEASELELYLLATCGFFGDFLLLDPCDAPAVSDFLQGKQSAKEDIFAGRGSSA 180

Query: 181 XXXXXTNVFCXXXXXXXXXXXXXXXXKVQEGNPDQTQESNPDQSQEMNANQTQEHIDDLN 240
                TNVFC                KVQEGNPDQTQESNPDQSQEMNANQTQEHIDDLN
Sbjct: 181 RSKSRTNVFCSPNGRSGGTGRRPTPGKVQEGNPDQTQESNPDQSQEMNANQTQEHIDDLN 240

Query: 241 VNDDHWSVHPADHDFPDNDMPHPXXXXXXXXXXXXXXXXPWRPLNPHEPGNLKIRTCRKV 300
           VNDDHWSVHPADHDFPDNDMPHP                PWRPLNPHEPGNLKIRTCRKV
Sbjct: 241 VNDDHWSVHPADHDFPDNDMPHPDDADAGCVDDSDDDDDPWRPLNPHEPGNLKIRTCRKV 300

Query: 301 KSFARQVIGAPKRNIIASLFPMEKMDGASFKVHLSQQETHHVPEPPPLYEKLMRSLEHGE 360
           KSFARQVIGAPKRNIIASLFPMEKMDGASFKVHLSQQETHHVPEPPPLYEKLMRSLEHGE
Sbjct: 301 KSFARQVIGAPKRNIIASLFPMEKMDGASFKVHLSQQETHHVPEPPPLYEKLMRSLEHGE 360

Query: 361 PESHLFGDLKDGHEPDIGVNDFDIHEXXXXXXXXXXXXXXXIPTYPDKNNDATLDGAQGT 420
           PESHLFGDLKDGHEPDIGVNDFDIHE               IPTYPDKNNDATLDGAQGT
Sbjct: 361 PESHLFGDLKDGHEPDIGVNDFDIHEPDMPDDVCDMDVDMDIPTYPDKNNDATLDGAQGT 420

Query: 421 QDSMDAHESLEDLCRSHLDALLASIAEAEQQTELDARVSTWKERIEHALEEQDRNPPFDI 480
           QDSMDAHESLEDLCRSHLDALLASIAEAEQQTELDARVSTWKERIEHALEEQDRNPPFDI
Sbjct: 421 QDSMDAHESLEDLCRSHLDALLASIAEAEQQTELDARVSTWKERIEHALEEQDRNPPFDI 480

Query: 481 GSYGEQIIDTLSSRTENAGIASFSEIVSGKPKYEVARTFSALLQLVNGRSVDLDKGQTTN 540
           GSYGEQIIDTLSSRTENAGIASFSEIVSGKPKYEVARTFSALLQLVNGRSVDLDKGQTTN
Sbjct: 481 GSYGEQIIDTLSSRTENAGIASFSEIVSGKPKYEVARTFSALLQLVNGRSVDLDKGQTTN 540

Query: 541 GLVCHTASNPFHVRLIGPNQRPEIEARFARKRVNSPSRNKGSGXXXXXXXXXXXXHGHKN 600
           GLVCHTASNPFHVRLIGPNQRPEIEARFARKRVNSPSRNKGSG            HGHKN
Sbjct: 541 GLVCHTASNPFHVRLIGPNQRPEIEARFARKRVNSPSRNKGSGKPSPAQQKSPKKHGHKN 600

Query: 601 GKVPVKTSIKLTPDGKRRRRSTQMLRPINLESS 633
           GKVPVKTSIKLTPDGKRRRRSTQMLRPINLESS
Sbjct: 601 GKVPVKTSIKLTPDGKRRRRSTQMLRPINLESS 633



  Database: rap3
    Posted date:  Nov 19, 2010  6:03 PM
  Number of letters in database: 17,035,801
  Number of sequences in database:  52,214
  
Lambda     K      H
   0.314    0.132    0.388 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 19,941,394
Number of extensions: 791076
Number of successful extensions: 1603
Number of sequences better than 1.0e-10: 1
Number of HSP's gapped: 1599
Number of HSP's successfully gapped: 1
Length of query: 633
Length of database: 17,035,801
Length adjustment: 107
Effective length of query: 526
Effective length of database: 11,448,903
Effective search space: 6022122978
Effective search space used: 6022122978
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 159 (65.9 bits)