Os07g0517100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : HSP20-like chaperone domain containing protein.
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Os07g0517100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : HSP20-like chaperone domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 161.89 | 0.598 | 12.4 | -3.15 | 0.593 | 1.63 | -0.337 | 0.00621 | -0.901 | 5.04 | 21.3 | 745 | -- | -- |
| 161.89 | 0.593 | 12.4 | -3.15 | 0.593 | 1.63 | -0.336 | -- | -0.901 | 5.04 | 21.3 | 745 | -- | -- |
| 162.14 | 0.593 | 12.4 | -3.14 | 0.585 | 1.65 | -- | 0.056 | -0.9 | 5.19 | 21.31 | 758 | -- | -- |
| 162.15 | 0.593 | 12.4 | -3.16 | 0.585 | 1.65 | -- | -- | -0.903 | 5.19 | 21.31 | 758 | -- | -- |
| 178.73 | 0.623 | 12.4 | -3.14 | -- | 1.64 | -- | 0.0578 | -0.884 | -- | 21.3 | 844 | -- | -- |
| 253.9 | 0.747 | 12.3 | -2.58 | 0.555 | -- | -0.784 | -- | -0.456 | 3.01 | -- | -- | -- | -- |
| 255.93 | 0.749 | 12.3 | -2.56 | 0.553 | -- | -- | -- | -0.451 | 3.12 | -- | -- | -- | -- |
| 178.73 | 0.623 | 12.4 | -3.15 | -- | 1.64 | -- | -- | -0.886 | -- | 21.31 | 840 | -- | -- |
| 394.27 | 0.925 | 12.3 | -- | 0.59 | 0.829 | -- | -- | -0.405 | 3.95 | 22.1 | 527 | -- | -- |
| 273.4 | 0.773 | 12.3 | -2.54 | -- | -- | -- | -- | -0.437 | -- | -- | -- | -- | -- |
| 429.28 | 0.969 | 12.2 | -- | 0.503 | -- | -- | -- | -0.166 | 3.11 | -- | -- | -- | -- |
| 407.91 | 0.941 | 12.3 | -- | -- | 0.829 | -- | -- | -0.409 | -- | 22.31 | 783 | -- | -- |
| 443.72 | 0.983 | 12.2 | -- | -- | -- | -- | -- | -0.155 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 163.22 | temperature | 25 | 720 | < th | dose dependent | rect. | 20 | 15 |
| 14 | 164.12 | temperature | 25 | 720 | < th | dose dependent | sin | 10 | NA |
| 112 | 169.27 | temperature | 25 | 720 | < th | dose dependent | no | NA | NA |
| 119 | 169.81 | temperature | 15 | 720 | > th | dose dependent | rect. | 23 | 6 |
| 120 | 169.88 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 8 |
| 121 | 169.89 | temperature | 25 | 720 | < th | dose dependent | rect. | 9 | 23 |
| 129 | 170.45 | temperature | 25 | 720 | < th | dose dependent | rect. | 4 | 23 |
| 136 | 170.82 | temperature | 25 | 720 | < th | dose dependent | rect. | 6 | 23 |
| 147 | 171.16 | temperature | 20 | 720 | > th | dose independent | rect. | 17 | 20 |
| 236 | 174.90 | temperature | 20 | 720 | > th | dose independent | rect. | 21 | 16 |
| 244 | 175.13 | temperature | 20 | 720 | > th | dose independent | rect. | 21 | 23 |
| 254 | 175.45 | temperature | 10 | 720 | > th | dose dependent | sin | 10 | NA |
| 269 | 175.81 | temperature | 20 | 720 | < th | dose independent | rect. | 21 | 18 |
| 278 | 176.02 | temperature | 20 | 720 | < th | dose independent | rect. | 19 | 19 |
| 282 | 176.10 | temperature | 20 | 720 | < th | dose independent | rect. | 17 | 18 |
| 303 | 176.44 | temperature | 20 | 720 | > th | dose independent | sin | 9 | NA |
| 330 | 176.71 | temperature | 20 | 720 | < th | dose independent | rect. | 21 | 14 |
| 337 | 176.81 | temperature | 20 | 720 | < th | dose independent | sin | 9 | NA |
| 340 | 176.85 | temperature | 20 | 720 | > th | dose independent | rect. | 1 | 19 |
| 343 | 176.85 | temperature | 20 | 720 | > th | dose independent | rect. | 8 | 23 |
| 415 | 177.84 | temperature | 15 | 720 | > th | dose dependent | rect. | 19 | 14 |
| 438 | 178.20 | temperature | 20 | 720 | > th | dose independent | no | NA | NA |
| 446 | 178.32 | temperature | 20 | 720 | > th | dose independent | rect. | 10 | 23 |
| 494 | 178.98 | temperature | 15 | 720 | > th | dose dependent | rect. | 21 | 12 |
| 501 | 179.04 | temperature | 20 | 720 | < th | dose independent | rect. | 8 | 23 |
| 504 | 179.06 | temperature | 20 | 720 | < th | dose independent | no | NA | NA |
| 555 | 179.78 | temperature | 20 | 720 | > th | dose independent | rect. | 10 | 21 |
| 567 | 179.96 | temperature | 20 | 720 | < th | dose independent | rect. | 1 | 23 |
| 580 | 180.11 | temperature | 20 | 720 | < th | dose independent | rect. | 3 | 23 |
| 672 | 181.34 | temperature | 20 | 1440 | < th | dose independent | rect. | 5 | 2 |
| 750 | 182.40 | temperature | 20 | 1440 | > th | dose independent | rect. | 5 | 2 |
| 769 | 182.62 | temperature | 20 | 720 | > th | dose independent | rect. | 21 | 9 |
| 926 | 184.27 | temperature | 20 | 1440 | < th | dose dependent | rect. | 4 | 1 |
| 966 | 184.61 | temperature | 20 | 720 | > th | dose independent | rect. | 1 | 4 |