FiT-DB / Search/ Help/ Sample detail

Os07g0512200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to Symbiosis-related like protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 13.5 (0.016) R2 : 0.0346
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.136 (0.0337) R2dN8 : 0.0446 R2N8 : 0.0346
σ : 0.302
deviance : 41.76
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
21.72 0.219 13.5 -0.26 0.245 -0.532 -0.48 -0.793 0.129 21.5 3 128 -- --
22.52 0.221 13.5 -0.261 0.266 -0.482 -0.0961 -- 0.129 21.9 3.045 127 -- --
22.16 0.219 13.5 -0.25 0.304 -0.478 -- -0.525 0.126 22.5 11.17 127 -- --
22.54 0.221 13.5 -0.258 0.281 -0.45 -- -- 0.125 22.3 4.789 127 -- --
24.07 0.228 13.5 -0.185 -- -0.663 -- -0.369 0.138 -- 2.617e-06 70 -- --
25.35 0.236 13.5 -0.261 0.485 -- 0.0264 -- 0.103 23.6 -- -- -- --
25.35 0.236 13.5 -0.262 0.485 -- -- -- 0.103 23.6 -- -- -- --
24.06 0.228 13.5 -0.264 -- -0.709 -- -- 0.129 -- -15.79 68 -- --
24.29 0.23 13.5 -- 0.277 -0.46 -- -- 0.154 22.2 4.79 127 -- --
40.13 0.296 13.5 -0.248 -- -- -- -- 0.109 -- -- -- -- --
27.16 0.244 13.5 -- 0.482 -- -- -- 0.132 23.6 -- -- -- --
25.88 0.237 13.5 -- -- -0.707 -- -- 0.158 -- -21.01 68 -- --
41.76 0.302 13.5 -- -- -- -- -- 0.136 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 21.31 radiation 40 90 < th dose dependent rect. 13 22
3 21.37 radiation 1 90 > th dose dependent rect. 8 9
5 21.44 radiation 20 90 < th dose independent rect. 13 22
7 21.46 radiation 1 270 > th dose dependent sin 6 NA
8 21.46 radiation 40 270 < th dose dependent sin 6 NA
28 21.57 radiation 1 90 > th dose dependent sin 1 NA
47 21.68 radiation 1 10 > th dose dependent rect. 9 9
62 21.70 radiation 40 270 < th dose dependent rect. 2 13
65 21.72 radiation 30 90 < th dose independent rect. 3 8
81 21.75 radiation 20 270 < th dose independent sin 7 NA
82 21.75 humidity 80 10 < th dose independent rect. 9 7
102 21.77 atmosphere 1000 10 > th dose independent rect. 6 14
117 21.78 radiation 20 90 < th dose independent rect. 15 20
120 21.78 radiation 40 90 < th dose dependent sin 3 NA
121 21.78 temperature 15 270 > th dose dependent rect. 3 4
174 21.82 radiation 40 10 < th dose dependent rect. 6 14
195 21.83 atmosphere 1000 270 > th dose independent rect. 3 15
196 21.83 radiation 1 90 > th dose dependent no NA NA
256 21.84 temperature 20 270 > th dose independent rect. 3 4
257 21.84 atmosphere 1000 90 > th dose independent rect. 5 14
258 21.84 radiation 40 270 < th dose independent rect. 10 22
275 21.84 radiation 10 90 > th dose dependent rect. 15 23
278 21.85 temperature 20 30 > th dose dependent rect. 3 6
300 21.85 radiation 40 90 < th dose dependent rect. 13 20
308 21.86 radiation 20 90 < th dose independent sin 4 NA
391 21.86 radiation 40 10 < th dose dependent rect. 12 23
392 21.87 temperature 15 270 > th dose dependent rect. 2 6
396 21.87 radiation 10 90 > th dose dependent rect. 13 23
441 21.92 radiation 40 10 < th dose independent rect. 6 14
442 21.93 radiation 20 270 < th dose independent rect. 2 13
446 21.94 radiation 10 10 > th dose independent rect. 9 7
449 21.94 radiation 40 90 < th dose dependent rect. 5 14
462 21.97 radiation 20 90 < th dose independent rect. 5 14
478 21.98 temperature 20 270 > th dose independent rect. 2 6
482 21.98 temperature 10 270 > th dose dependent rect. 3 16
497 22.00 humidity 80 90 < th dose independent rect. 5 11
516 22.03 radiation 40 90 < th dose dependent rect. 21 23
518 22.04 radiation 40 270 < th dose independent rect. 3 14
524 22.05 radiation 20 90 < th dose independent rect. 1 23
532 22.06 radiation 20 90 < th dose independent rect. 15 18
550 22.06 radiation 10 10 > th dose dependent rect. 13 23
561 22.08 radiation 40 90 < th dose dependent no NA NA
566 22.08 radiation 40 90 < th dose dependent rect. 1 23
571 22.09 atmosphere 1015 90 < th dose dependent rect. 8 7
575 22.10 atmosphere 1000 10 < th dose independent rect. 9 7
587 22.10 radiation 20 90 < th dose independent rect. 17 18
618 22.12 radiation 20 90 < th dose independent rect. 17 16
621 22.12 temperature 15 90 > th dose dependent rect. 8 7
622 22.12 atmosphere 1015 10 < th dose dependent rect. 9 7
678 22.14 radiation 20 270 > th dose independent sin 6 NA
682 22.14 radiation 20 90 < th dose independent rect. 21 23
688 22.15 humidity 80 90 < th dose independent sin 2 NA
694 22.15 temperature 20 270 > th dose independent rect. 3 16
716 22.16 radiation 40 90 < th dose dependent rect. 15 18
725 22.17 radiation 1 270 > th dose dependent rect. 9 1
776 22.19 temperature 15 10 > th dose dependent rect. 9 7
798 22.20 humidity 80 90 > th dose independent sin 3 NA
824 22.20 radiation 40 10 < th dose dependent rect. 21 23
857 22.23 radiation 20 90 > th dose independent sin 2 NA
887 22.24 radiation 40 10 < th dose independent sin 7 NA
899 22.24 radiation 40 10 > th dose independent rect. 13 23
900 22.24 radiation 1 10 > th dose dependent sin 23 NA
933 22.26 radiation 20 90 < th dose independent no NA NA
946 22.26 temperature 30 720 < th dose dependent rect. 24 9
952 22.26 radiation 40 90 < th dose dependent rect. 15 23
961 22.27 radiation 40 10 < th dose dependent sin 2 NA