BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os07g0512200 Os07g0512200|AK059939
(119 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G62040.2 | chr1:22932782-22934253 FORWARD LENGTH=134 218 6e-58
AT4G21980.2 | chr4:11655868-11656809 FORWARD LENGTH=138 210 2e-55
AT4G04620.1 | chr4:2328663-2329926 REVERSE LENGTH=123 201 6e-53
AT4G16520.1 | chr4:9306882-9308113 REVERSE LENGTH=122 197 9e-52
AT2G05630.2 | chr2:2083211-2084775 REVERSE LENGTH=165 196 2e-51
AT3G60640.1 | chr3:22416118-22416971 FORWARD LENGTH=122 194 9e-51
AT2G45170.1 | chr2:18624545-18625526 FORWARD LENGTH=123 186 3e-48
AT3G15580.1 | chr3:5274075-5275000 REVERSE LENGTH=116 144 1e-35
AT3G06420.1 | chr3:1955219-1956274 REVERSE LENGTH=120 133 2e-32
>AT1G62040.2 | chr1:22932782-22934253 FORWARD LENGTH=134
Length = 133
Score = 218 bits (555), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 103/117 (88%), Positives = 112/117 (95%)
Query: 1 MARTSFKLEHPLERRQAESARIREKYSDRIPVIVEKADKTDVPEIDKKKYLVPADLTVGQ 60
MA +SFKLEHPLERRQ ES+RIREKY DRIPVIVE+A+++DVP IDKKKYLVPADLTVGQ
Sbjct: 15 MANSSFKLEHPLERRQIESSRIREKYPDRIPVIVERAERSDVPNIDKKKYLVPADLTVGQ 74
Query: 61 FVYVVRKRIKLSPEKAIFVFVKNTLPPTASLMSAIYEENKDEDGFLYMTYSGENTFG 117
FVYVVRKRIKLS EKAIFVFVKNTLPPTA++MSAIY+ENKDEDGFLYMTYSGENTFG
Sbjct: 75 FVYVVRKRIKLSAEKAIFVFVKNTLPPTAAMMSAIYDENKDEDGFLYMTYSGENTFG 131
>AT4G21980.2 | chr4:11655868-11656809 FORWARD LENGTH=138
Length = 137
Score = 210 bits (534), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 100/118 (84%), Positives = 111/118 (94%)
Query: 1 MARTSFKLEHPLERRQAESARIREKYSDRIPVIVEKADKTDVPEIDKKKYLVPADLTVGQ 60
MA++SFK+ +PLE R +ES+RIREKY DRIPVIVEKA ++DVP+IDKKKYLVPADLTVGQ
Sbjct: 16 MAKSSFKISNPLEARMSESSRIREKYPDRIPVIVEKAGQSDVPDIDKKKYLVPADLTVGQ 75
Query: 61 FVYVVRKRIKLSPEKAIFVFVKNTLPPTASLMSAIYEENKDEDGFLYMTYSGENTFGS 118
FVYVVRKRIKL EKAIFVFVKNTLPPTA+LMSAIYEE+KDEDGFLYMTYSGENTFGS
Sbjct: 76 FVYVVRKRIKLGAEKAIFVFVKNTLPPTAALMSAIYEEHKDEDGFLYMTYSGENTFGS 133
>AT4G04620.1 | chr4:2328663-2329926 REVERSE LENGTH=123
Length = 122
Score = 201 bits (512), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 96/119 (80%), Positives = 107/119 (89%)
Query: 1 MARTSFKLEHPLERRQAESARIREKYSDRIPVIVEKADKTDVPEIDKKKYLVPADLTVGQ 60
M + SFKL +PLE R AES RIR KY +R+PVIVEKA ++DVP+IDKKKYLVPADLT+GQ
Sbjct: 1 MEKNSFKLSNPLEMRMAESTRIRAKYPERVPVIVEKAGQSDVPDIDKKKYLVPADLTIGQ 60
Query: 61 FVYVVRKRIKLSPEKAIFVFVKNTLPPTASLMSAIYEENKDEDGFLYMTYSGENTFGSA 119
FVYVVRKRIKL EKAIFVFVKNTLPPTA+LMSAIYEE+KDEDGFLYMTYSGENTFG +
Sbjct: 61 FVYVVRKRIKLGAEKAIFVFVKNTLPPTAALMSAIYEEHKDEDGFLYMTYSGENTFGGS 119
>AT4G16520.1 | chr4:9306882-9308113 REVERSE LENGTH=122
Length = 121
Score = 197 bits (501), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 92/117 (78%), Positives = 107/117 (91%)
Query: 1 MARTSFKLEHPLERRQAESARIREKYSDRIPVIVEKADKTDVPEIDKKKYLVPADLTVGQ 60
MA++SFK EH LE+R+AE+ARIREKY DRIPVIVEKA+K+D+P IDKKKYLVPADLTVGQ
Sbjct: 1 MAKSSFKQEHDLEKRRAEAARIREKYPDRIPVIVEKAEKSDIPTIDKKKYLVPADLTVGQ 60
Query: 61 FVYVVRKRIKLSPEKAIFVFVKNTLPPTASLMSAIYEENKDEDGFLYMTYSGENTFG 117
FVYV+RKRIKLS EKAIF+FV N LPP +LMS++YEE KD+DGFLY+TYSGENTFG
Sbjct: 61 FVYVIRKRIKLSAEKAIFIFVDNVLPPAGALMSSVYEEKKDDDGFLYVTYSGENTFG 117
>AT2G05630.2 | chr2:2083211-2084775 REVERSE LENGTH=165
Length = 164
Score = 196 bits (498), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 91/106 (85%), Positives = 104/106 (98%)
Query: 12 LERRQAESARIREKYSDRIPVIVEKADKTDVPEIDKKKYLVPADLTVGQFVYVVRKRIKL 71
L++RQAE+ARIREKY DRIPVIVE+A+K+DVP+ID+KKYLVPADLTVGQFVYVVRKRIKL
Sbjct: 56 LKKRQAEAARIREKYPDRIPVIVERAEKSDVPDIDRKKYLVPADLTVGQFVYVVRKRIKL 115
Query: 72 SPEKAIFVFVKNTLPPTASLMSAIYEENKDEDGFLYMTYSGENTFG 117
SPEKAIF+FVKN LPPTA++MSAIYEE+KDEDGFLYM+YSGENTFG
Sbjct: 116 SPEKAIFIFVKNILPPTAAIMSAIYEEHKDEDGFLYMSYSGENTFG 161
>AT3G60640.1 | chr3:22416118-22416971 FORWARD LENGTH=122
Length = 121
Score = 194 bits (493), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 87/119 (73%), Positives = 107/119 (89%)
Query: 1 MARTSFKLEHPLERRQAESARIREKYSDRIPVIVEKADKTDVPEIDKKKYLVPADLTVGQ 60
M+ SF+ +H E+R+AE+ RIREKYSDR+PVIVEK++K+D+P IDKKKYLVPADLTVGQ
Sbjct: 1 MSNVSFRQDHDFEKRKAEALRIREKYSDRVPVIVEKSEKSDIPNIDKKKYLVPADLTVGQ 60
Query: 61 FVYVVRKRIKLSPEKAIFVFVKNTLPPTASLMSAIYEENKDEDGFLYMTYSGENTFGSA 119
FVYV+RKRI+LS EKAIF+FV N LPPT ++MS IY+ENK+EDGFLY+TYSGENTFGS+
Sbjct: 61 FVYVIRKRIQLSAEKAIFIFVDNVLPPTGAMMSTIYDENKEEDGFLYVTYSGENTFGSS 119
>AT2G45170.1 | chr2:18624545-18625526 FORWARD LENGTH=123
Length = 122
Score = 186 bits (471), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 85/114 (74%), Positives = 103/114 (90%)
Query: 6 FKLEHPLERRQAESARIREKYSDRIPVIVEKADKTDVPEIDKKKYLVPADLTVGQFVYVV 65
FK+++ E+R+AE+ RIREKY DRIPVIVEKA+K++VP IDKKKYLVP+DLTVGQFVYV+
Sbjct: 7 FKMDNDFEKRKAEAGRIREKYPDRIPVIVEKAEKSEVPNIDKKKYLVPSDLTVGQFVYVI 66
Query: 66 RKRIKLSPEKAIFVFVKNTLPPTASLMSAIYEENKDEDGFLYMTYSGENTFGSA 119
RKRIKLS EKAIF+FV N LPPT LMS++YE+ KDEDGFLY+TYSGENTFG++
Sbjct: 67 RKRIKLSAEKAIFIFVDNVLPPTGELMSSVYEDKKDEDGFLYITYSGENTFGAS 120
>AT3G15580.1 | chr3:5274075-5275000 REVERSE LENGTH=116
Length = 115
Score = 144 bits (363), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 68/113 (60%), Positives = 86/113 (76%)
Query: 5 SFKLEHPLERRQAESARIREKYSDRIPVIVEKADKTDVPEIDKKKYLVPADLTVGQFVYV 64
SFK ++ L+ R AES I KY RIPVI EK KTD+P I+KKK+LVP D++VGQF+Y+
Sbjct: 3 SFKEQYTLDERLAESREIIAKYPTRIPVIAEKYCKTDLPAIEKKKFLVPRDMSVGQFIYI 62
Query: 65 VRKRIKLSPEKAIFVFVKNTLPPTASLMSAIYEENKDEDGFLYMTYSGENTFG 117
+ R+ LSP KA+FVFV NTLP TA+LM ++YE KD+DGF+YM YS E TFG
Sbjct: 63 LSARLHLSPGKALFVFVNNTLPQTAALMDSVYESYKDDDGFVYMCYSSEKTFG 115
>AT3G06420.1 | chr3:1955219-1956274 REVERSE LENGTH=120
Length = 119
Score = 133 bits (334), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 63/113 (55%), Positives = 81/113 (71%)
Query: 5 SFKLEHPLERRQAESARIREKYSDRIPVIVEKADKTDVPEIDKKKYLVPADLTVGQFVYV 64
SFK + + R ES I KY DRIPVI+EK D+P+++K KYLVP D+TVG F+++
Sbjct: 7 SFKDQFSSDERLKESNNIIAKYPDRIPVIIEKYSNADLPDMEKNKYLVPRDMTVGHFIHM 66
Query: 65 VRKRIKLSPEKAIFVFVKNTLPPTASLMSAIYEENKDEDGFLYMTYSGENTFG 117
+ KR++L P KA+FVFV NTLP TAS M ++Y K+EDGFLYM YS E TFG
Sbjct: 67 LSKRMQLDPSKALFVFVHNTLPQTASRMDSLYNTFKEEDGFLYMCYSTEKTFG 119
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.316 0.133 0.368
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 2,553,403
Number of extensions: 97496
Number of successful extensions: 273
Number of sequences better than 1.0e-05: 9
Number of HSP's gapped: 273
Number of HSP's successfully gapped: 9
Length of query: 119
Length of database: 11,106,569
Length adjustment: 85
Effective length of query: 34
Effective length of database: 8,776,209
Effective search space: 298391106
Effective search space used: 298391106
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 105 (45.1 bits)