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Os07g0507200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Targeting for Xklp2 family protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 6.05 (0.0259) R2 : 0.426
β1 : -1.38 (0.0946) R2dD : 0.276 R2D : 0.287
β2 : 0.653 (0.0675) R2dC : 0.119 R2C : 0.111
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.172 (0.0552) R2dN8 : 0.0164 R2N8 : 0.0366
σ : 0.486
deviance : 107.66
__
_____
C
peak time of C : 6.21
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
99.19 0.468 6.03 -1.36 0.78 0.694 0.0971 -0.369 0.222 9.06 36.36 95 -- --
99.47 0.465 6.03 -1.36 0.776 0.696 0.327 -- 0.217 9.08 36.81 97 -- --
99.21 0.464 6.03 -1.35 0.778 0.691 -- -0.43 0.223 9.06 36.13 96 -- --
99.82 0.465 6.03 -1.35 0.766 0.705 -- -- 0.222 8.99 40 97 -- --
105.84 0.479 6.04 -1.28 -- 0.767 -- -0.295 0.242 -- 20 735 -- --
107.66 0.486 6.05 -1.38 0.653 -- -0.0353 -- 0.172 6.2 -- -- -- --
107.66 0.486 6.05 -1.38 0.653 -- -- -- 0.172 6.21 -- -- -- --
105.76 0.479 6.05 -1.33 -- 0.825 -- -- 0.249 -- 20 755 -- --
147.58 0.566 6 -- 0.769 0.692 -- -- 0.373 8.97 35.15 104 -- --
129.77 0.532 6.06 -1.36 -- -- -- -- 0.186 -- -- -- -- --
157.6 0.587 6.01 -- 0.634 -- -- -- 0.325 6.32 -- -- -- --
150.68 0.572 6.01 -- -- 0.877 -- -- 0.416 -- 33.37 811 -- --
178.45 0.624 6.02 -- -- -- -- -- 0.337 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 96.66 wind 1.0 14400 < th dose dependent rect. 2 1
2 97.06 radiation 40.0 30 < th dose dependent rect. 3 23
4 97.55 temperature 30.0 270 < th dose independent rect. 2 17
5 97.56 wind 1.0 43200 < th dose independent rect. 9 2
8 97.69 temperature 30.0 720 < th dose independent rect. 9 6
9 97.71 temperature 30.0 270 < th dose independent rect. 1 19
11 97.79 wind 1.0 43200 > th dose independent rect. 9 2
12 97.84 temperature 30.0 270 < th dose independent rect. 24 21
13 97.91 humidity 90.0 43200 < th dose independent rect. 10 1
14 97.94 temperature 30.0 720 > th dose independent rect. 8 6
31 98.06 humidity 90.0 43200 > th dose independent rect. 10 1
32 98.13 temperature 30.0 720 > th dose independent sin 6 NA
50 98.21 wind 9.0 43200 > th dose dependent rect. 19 11
56 98.34 wind 9.0 43200 > th dose independent rect. 19 11
58 98.36 wind 9.0 43200 > th dose independent rect. 19 6
59 98.37 wind 9.0 43200 < th dose independent rect. 19 11
62 98.39 wind 9.0 43200 < th dose independent rect. 19 6
65 98.41 wind 1.0 14400 < th dose independent rect. 2 1
67 98.43 wind 1.0 14400 > th dose independent rect. 2 1
74 98.48 wind 9.0 43200 > th dose dependent rect. 19 6
83 98.53 radiation 20.0 30 < th dose independent rect. 3 23
121 98.78 radiation 40.0 90 < th dose dependent rect. 15 23
126 98.79 atmosphere 1000.0 30 > th dose independent rect. 3 20
128 98.81 temperature 20.0 14400 < th dose independent rect. 21 2
129 98.81 wind 9.0 43200 < th dose independent rect. 18 3
136 98.83 temperature 20.0 4320 > th dose dependent rect. 17 1
138 98.84 temperature 20.0 14400 > th dose independent rect. 20 5
139 98.84 wind 7.0 43200 > th dose dependent rect. 19 1
143 98.85 humidity 80.0 43200 > th dose dependent rect. 11 1
144 98.86 temperature 20.0 14400 > th dose independent rect. 21 2
150 98.87 precipitation 0.1 43200 > th dose dependent rect. 14 5
166 98.92 wind 3.0 14400 > th dose independent rect. 12 2
178 98.94 wind 5.0 14400 > th dose dependent rect. 21 2
180 98.95 wind 3.0 14400 < th dose independent rect. 10 4
185 98.96 temperature 30.0 720 > th dose independent rect. 13 1
210 99.02 precipitation 0.1 43200 > th dose independent rect. 17 2
241 99.08 wind 5.0 14400 > th dose independent rect. 21 2
249 99.10 precipitation 0.1 43200 < th dose independent rect. 17 2
254 99.10 precipitation 0.1 43200 < th dose dependent rect. 17 2
274 99.14 temperature 20.0 1440 > th dose independent rect. 23 1
277 99.14 temperature 30.0 4320 < th dose dependent rect. 17 1
293 99.16 wind 1.0 43200 < th dose dependent rect. 21 1
338 99.22 wind 5.0 14400 < th dose independent rect. 21 2
351 99.23 radiation 40.0 10 < th dose independent rect. 3 11
355 99.24 atmosphere 1005.0 14400 < th dose independent rect. 21 1
359 99.24 wind 3.0 43200 < th dose dependent rect. 10 1
360 99.24 humidity 90.0 14400 > th dose dependent rect. 5 1
367 99.26 temperature 20.0 1440 < th dose independent rect. 23 1
403 99.31 radiation 20.0 90 < th dose independent rect. 15 23
404 99.31 radiation 40.0 90 < th dose dependent no NA NA
412 99.33 atmosphere 1005.0 14400 < th dose independent rect. 12 1
417 99.33 radiation 40.0 30 < th dose independent rect. 3 9
431 99.34 atmosphere 995.0 43200 < th dose dependent rect. 11 14
453 99.38 atmosphere 1005.0 14400 > th dose independent rect. 12 1
483 99.42 temperature 30.0 270 < th dose independent rect. 10 10
488 99.43 wind 5.0 43200 > th dose independent rect. 5 2
498 99.44 temperature 10.0 4320 > th dose dependent rect. 17 1
505 99.46 radiation 20.0 90 < th dose independent sin 20 NA
508 99.46 atmosphere 995.0 43200 < th dose dependent sin 18 NA
530 99.48 radiation 30.0 90 < th dose dependent rect. 13 23
531 99.49 temperature 30.0 720 < th dose independent rect. 10 3
536 99.49 radiation 40.0 43200 < th dose dependent rect. 24 5
538 99.49 radiation 40.0 10 < th dose dependent rect. 16 23
551 99.51 wind 5.0 43200 > th dose independent rect. 17 19
570 99.53 wind 3.0 43200 < th dose dependent rect. 23 1
599 99.56 radiation 20.0 90 < th dose independent rect. 3 20
600 99.56 radiation 20.0 14400 < th dose dependent rect. 24 5
619 99.58 temperature 20.0 1440 < th dose independent rect. 21 10
620 99.58 atmosphere 995.0 43200 < th dose independent rect. 3 12
622 99.58 radiation 1.0 90 > th dose dependent no NA NA
626 99.58 radiation 1.0 90 > th dose dependent rect. 6 13
697 99.59 wind 5.0 43200 > th dose independent rect. 5 5
732 99.61 radiation 20.0 43200 < th dose independent rect. 24 6
747 99.61 atmosphere 1000.0 30 > th dose independent rect. 3 23
752 99.62 radiation 20.0 90 < th dose independent no NA NA
753 99.62 wind 5.0 43200 < th dose independent rect. 5 2
759 99.62 atmosphere 995.0 43200 < th dose dependent rect. 14 2
767 99.63 atmosphere 1005.0 14400 < th dose independent rect. 19 4
770 99.63 wind 5.0 43200 < th dose independent rect. 17 19
783 99.64 radiation 1.0 90 > th dose dependent sin 21 NA
805 99.66 wind 1.0 43200 > th dose independent rect. 11 14
807 99.66 temperature 20.0 4320 > th dose dependent sin 19 NA
816 99.67 temperature 20.0 1440 > th dose independent rect. 21 10
837 99.68 radiation 30.0 4320 < th dose independent rect. 16 16
846 99.69 wind 5.0 43200 < th dose independent rect. 5 5
859 99.70 wind 1.0 43200 < th dose independent rect. 21 1
868 99.70 wind 5.0 43200 > th dose dependent rect. 5 2
871 99.70 atmosphere 995.0 30 > th dose dependent rect. 3 20
883 99.71 precipitation 0.1 43200 > th dose dependent rect. 14 8
888 99.71 radiation 40.0 90 < th dose dependent rect. 3 20
900 99.72 temperature 30.0 4320 < th dose dependent rect. 16 8
914 99.73 wind 5.0 43200 > th dose dependent sin 11 NA
926 99.74 wind 7.0 43200 > th dose independent sin 11 NA