Os07g0477500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os07g0477500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 17.41 | 0.196 | 11.2 | 0.804 | 0.0933 | -0.55 | -0.389 | -0.874 | 0.255 | 5.87 | 25.2 | 3826 | -- | -- |
| 18.14 | 0.198 | 11.2 | 0.664 | 0.0904 | -0.417 | -0.382 | -- | 0.246 | 6.09 | 30.81 | 3840 | -- | -- |
| 17.71 | 0.196 | 11.2 | 0.801 | 0.0996 | -0.549 | -- | -0.865 | 0.256 | 4.71 | 25.07 | 3707 | -- | -- |
| 18.46 | 0.2 | 11.2 | 0.655 | 0.0956 | -0.418 | -- | -- | 0.243 | 4.76 | 30.76 | 3845 | -- | -- |
| 18.2 | 0.199 | 11.2 | 0.801 | -- | -0.562 | -- | -0.885 | 0.256 | -- | 25 | 3865 | -- | -- |
| 21.37 | 0.217 | 11.2 | 0.843 | 0.111 | -- | -0.344 | -- | 0.33 | 5.23 | -- | -- | -- | -- |
| 21.55 | 0.217 | 11.2 | 0.841 | 0.116 | -- | -- | -- | 0.331 | 3.74 | -- | -- | -- | -- |
| 18.9 | 0.203 | 11.2 | 0.636 | -- | -0.434 | -- | -- | 0.225 | -- | 26.9 | 3948 | -- | -- |
| 20.98 | 0.213 | 11.3 | -- | 0.104 | -0.705 | -- | -- | 0.0328 | 4.6 | 40.03 | 47520 | -- | -- |
| 22.29 | 0.221 | 11.2 | 0.846 | -- | -- | -- | -- | 0.334 | -- | -- | -- | -- | -- |
| 40.2 | 0.297 | 11.2 | -- | 0.132 | -- | -- | -- | 0.237 | 3.68 | -- | -- | -- | -- |
| 21.23 | 0.215 | 11.2 | -- | -- | -0.728 | -- | -- | 0.049 | -- | 23.55 | 47520 | -- | -- |
| 41.18 | 0.3 | 11.2 | -- | -- | -- | -- | -- | 0.24 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 17.35 | temperature | 20 | 4320 | > th | dose dependent | rect. | 2 | 1 |
| 6 | 17.43 | temperature | 25 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 15 | 17.50 | temperature | 10 | 4320 | > th | dose dependent | rect. | 2 | 1 |
| 16 | 17.50 | temperature | 30 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 29 | 17.51 | temperature | 25 | 4320 | < th | dose dependent | rect. | 20 | 7 |
| 55 | 17.53 | temperature | 10 | 4320 | > th | dose dependent | rect. | 21 | 7 |
| 101 | 17.55 | temperature | 25 | 4320 | < th | dose dependent | rect. | 11 | 17 |
| 148 | 17.58 | temperature | 25 | 4320 | < th | dose dependent | sin | 15 | NA |
| 457 | 17.69 | temperature | 25 | 4320 | < th | dose dependent | rect. | 19 | 18 |
| 460 | 17.69 | temperature | 25 | 4320 | < th | dose dependent | rect. | 17 | 20 |
| 518 | 17.71 | temperature | 25 | 4320 | < th | dose dependent | no | NA | NA |
| 636 | 17.73 | temperature | 10 | 4320 | > th | dose dependent | sin | 12 | NA |
| 683 | 17.73 | temperature | 25 | 4320 | < th | dose dependent | rect. | 1 | 23 |
| 685 | 17.73 | temperature | 25 | 4320 | < th | dose dependent | rect. | 23 | 23 |
| 906 | 17.78 | temperature | 20 | 4320 | > th | dose independent | sin | 17 | NA |
| 963 | 17.79 | temperature | 20 | 4320 | < th | dose independent | sin | 17 | NA |
| 964 | 17.79 | temperature | 25 | 4320 | < th | dose independent | rect. | 13 | 15 |