BLASTP 2.2.23 [Feb-03-2010]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Os07g0477500 Os07g0477500|AK066181
         (794 letters)

Database: tair10 
           27,416 sequences; 11,106,569 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G08450.1  | chr5:2727970-2732572 REVERSE LENGTH=919            657   0.0  

>AT5G08450.1 | chr5:2727970-2732572 REVERSE LENGTH=919
          Length = 918

 Score =  657 bits (1694), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 354/662 (53%), Positives = 444/662 (67%), Gaps = 26/662 (3%)

Query: 151 HADYKGDAKLDKDGHPTAISNIAWKDNKE-HRGKRNIEQPSDNAD-WRFPRPGLQGTDES 208
           + + KG+ K++K+GH    +++AWK+ K+ HRGKR  E  + N D W   R   QG  E 
Sbjct: 265 YNEQKGEIKMEKEGH----AHLAWKEQKDYHRGKRVAEGSTANVDPWVVSRGNPQGPTEV 320

Query: 209 SKGP----VPADERSKDAHESTGENKTEPKTXXXXXXXXXXXXXXXXXXXGTXXXXXXXX 264
             GP     P +    +  E+ GENK + K                    G         
Sbjct: 321 --GPKDLSAPVEGSHLEGRETVGENKVDAKNEDRFKEKDKKRKELKHREWGDRDKDRNDR 378

Query: 265 XIGIQLGGNSVERRENQREDRDAEKWDRERKDSQKDKEGN-DREKDSAK-ESSVATEKEN 322
            + + +G    E +E  RE+R++++W+RER + QKD+E N +++KD  K E     EKE 
Sbjct: 379 RVSVLVGSVMSEPKEIGREERESDRWERERME-QKDRERNKEKDKDHIKREPRTGAEKEI 437

Query: 323 AILEKTASDGAVKSAEHENKTVEQKTLK--DDAWKSHXXXXXXXXXXXXXXAGERHDQRS 380
           +  EK   + + K +E E    EQK     D+  K                  ER ++RS
Sbjct: 438 SQNEKELGEASAKPSEQEYVAPEQKKQNEPDNCEKDERETKEKRRERDGDSEAERAEKRS 497

Query: 381 KYNDKESDDTCPEGD--IEKDKEAL--GSVQRKRMARSRGGSQASQREPRFRSRMRDGEG 436
           + ++KES+D C EG+   E++K+A   G  QRKR  R RG  Q + R+   RSR +D EG
Sbjct: 498 RISEKESEDGCLEGEGATEREKDAFNYGVQQRKRALRPRGSPQTTNRD-NVRSRSQDNEG 556

Query: 437 SQGKSEASAIVYKAGECMQELLKSWKEFEATPEAKSAESVQNGPTLEIRIPAEFVTSTNR 496
            QGKSE S +VYK GECMQEL+K WKE++ +   KS +   NGPTLE+RIPAE VT+TNR
Sbjct: 557 VQGKSEVSIVVYKVGECMQELIKLWKEYDLSHPDKSGDFANNGPTLEVRIPAEHVTATNR 616

Query: 497 QVKGAQLWGTDIYTNDSDLVAVLMHTGYCSPTSSPPPSAIQELRATVRVLPPQDSYTSTL 556
           QV+G QLWGTDIYT+DSDLVAVLMHTGYC PT+SPPP  +QELR T+RVLP QD YTS L
Sbjct: 617 QVRGGQLWGTDIYTDDSDLVAVLMHTGYCRPTASPPPPTMQELRTTIRVLPSQDYYTSKL 676

Query: 557 RNNVRSRAWGAGIGCSFRIERCCIVKKGGGTIDLEPRLSHTSAVEPTLAPVAVERTMTTR 616
           RNNVRSRAWGAGIGCS+R+ERC I+KKGGGTI+LEP L+H+S VEPTLAP+AVER+MTTR
Sbjct: 677 RNNVRSRAWGAGIGCSYRVERCYILKKGGGTIELEPSLTHSSTVEPTLAPMAVERSMTTR 736

Query: 617 AAASNALRQQRFVREVTIQYNLCNEPWLKYSISIVADKGLKKSLYTSARLKKGEVIYLET 676
           AAASNALRQQRFVREVTIQYNLCNEPW+KYSISIVADKGLKK L+TSARLKKGEV+YLET
Sbjct: 737 AAASNALRQQRFVREVTIQYNLCNEPWIKYSISIVADKGLKKPLFTSARLKKGEVLYLET 796

Query: 677 HYNRYELCFSGEKA-RLVGSS---SNAADAETEKXXXXXXXXXXXGDRASSEHELRDLFR 732
           H  RYELCF+GEK  + + +S   S+    ET+            GD+  S++ L D+FR
Sbjct: 797 HSCRYELCFAGEKTIKAIQASQQQSSHEAMETDNNNNKSQNHLTNGDKTDSDNSLIDVFR 856

Query: 733 WSRCKKAMPESSMRSIGIPLPADQLEVLQDNLEWEDVQWSQTGVWVAGKEYPLARVHFLS 792
           WSRCKK +P+  MRSIG PLPAD +EVL++NL+WEDVQWSQTGVW+AGKEY LARVHFLS
Sbjct: 857 WSRCKKPLPQKLMRSIGFPLPADHIEVLEENLDWEDVQWSQTGVWIAGKEYTLARVHFLS 916

Query: 793 SN 794
            N
Sbjct: 917 PN 918



  Database: tair10
    Posted date:  Dec 8, 2010 11:30 AM
  Number of letters in database: 11,106,569
  Number of sequences in database:  27,416
  
Lambda     K      H
   0.310    0.127    0.370 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 16,259,308
Number of extensions: 661145
Number of successful extensions: 3005
Number of sequences better than 1.0e-05: 1
Number of HSP's gapped: 3013
Number of HSP's successfully gapped: 1
Length of query: 794
Length of database: 11,106,569
Length adjustment: 107
Effective length of query: 687
Effective length of database: 8,173,057
Effective search space: 5614890159
Effective search space used: 5614890159
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 116 (49.3 bits)