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Os07g0445600

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.16 (0.0327) R2 : 0.541
β1 : -2.46 (0.123) R2dD : 0.442 R2D : 0.312
β2 : -- (--) R2dC : -- R2C : --
β3 : 1.32 (0.0913) R2dE : 0.224 R2E : 0.0673
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.183 (0.0698) R2dN8 : 0.00932 R2N8 : 0.0238
σ : 0.611
deviance : 172.16
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C
peak time of C : --
E
wheather : temperature
threshold : 27.29
memory length : 1274
response mode : > th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
158.41 0.591 9.25 -3.38 0.414 1.89 -0.773 -4.54 0.0927 11.5 27.79 1217 -- --
160.67 0.59 9.16 -2.47 0.411 1.46 -0.729 -- 0.149 11.8 26.62 1224 -- --
160.31 0.59 9.24 -3.25 0.442 1.83 -- -3.71 0.0878 10.7 27.55 1206 -- --
161.99 0.593 9.16 -2.48 0.448 1.47 -- -- 0.154 10.7 26.88 1197 -- --
170.66 0.608 9.24 -3.16 -- 1.66 -- -3.26 0.122 -- 27.8 1271 -- --
242.36 0.73 9.16 -2.02 0.0239 -- 1.68 -- 0.175 3.39 -- -- -- --
247.48 0.737 9.16 -2.05 0.261 -- -- -- 0.164 8.56 -- -- -- --
172.16 0.611 9.16 -2.46 -- 1.32 -- -- 0.183 -- 27.29 1274 -- --
311.1 0.821 9.06 -- 0.361 0.993 -- -- 0.604 10.6 30.59 1160 -- --
251.31 0.741 9.16 -2.05 -- -- -- -- 0.166 -- -- -- -- --
358.49 0.886 9.11 -- 0.257 -- -- -- 0.392 9.15 -- -- -- --
318.99 0.832 9.07 -- -- 0.923 -- -- 0.591 -- 30.6 1178 -- --
362.3 0.888 9.11 -- -- -- -- -- 0.394 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 157.99 temperature 25 720 > th dose dependent rect. 17 15
2 159.32 temperature 25 720 > th dose dependent rect. 17 6
11 161.63 temperature 25 720 > th dose dependent sin 12 NA
18 162.22 humidity 70 720 > th dose independent rect. 17 3
23 162.78 humidity 70 720 > th dose independent rect. 17 9
26 163.19 temperature 30 720 < th dose independent rect. 17 9
56 165.96 humidity 70 1440 < th dose independent rect. 18 13
58 166.06 humidity 70 1440 < th dose independent rect. 18 2
71 166.26 temperature 30 1440 > th dose independent sin 13 NA
73 166.40 temperature 30 1440 < th dose independent sin 13 NA
85 166.86 temperature 30 720 < th dose independent rect. 17 2
86 166.90 temperature 30 1440 > th dose independent rect. 15 4
135 167.21 temperature 30 1440 > th dose dependent rect. 13 6
154 167.28 temperature 30 1440 < th dose independent rect. 16 15
157 167.31 temperature 30 1440 < th dose independent rect. 16 6
191 167.41 temperature 30 720 < th dose dependent rect. 17 3
239 167.72 radiation 40 1440 < th dose dependent rect. 16 11
253 167.85 temperature 30 720 < th dose dependent rect. 18 1
254 167.85 humidity 80 1440 < th dose dependent rect. 16 3
276 167.94 radiation 40 1440 < th dose dependent rect. 16 9
349 168.20 radiation 40 1440 < th dose dependent rect. 16 7
375 168.37 humidity 70 1440 > th dose independent rect. 18 13
405 168.46 temperature 30 1440 < th dose independent rect. 15 21
414 168.50 temperature 30 1440 > th dose dependent no NA NA
531 168.61 radiation 40 1440 < th dose dependent rect. 16 3
566 168.77 temperature 30 1440 > th dose dependent rect. 17 23
569 168.78 radiation 10 1440 > th dose dependent rect. 16 14
570 168.79 temperature 30 1440 < th dose independent rect. 9 18
571 168.79 temperature 30 1440 < th dose independent rect. 15 19
578 168.81 temperature 30 1440 < th dose independent rect. 9 16
579 168.81 temperature 30 1440 < th dose independent rect. 9 22
580 168.81 radiation 10 1440 > th dose dependent rect. 16 2
593 168.82 temperature 30 1440 < th dose independent rect. 9 13
615 168.85 temperature 30 1440 < th dose independent rect. 9 10
625 168.88 temperature 30 1440 > th dose independent rect. 15 21
628 168.94 temperature 30 1440 < th dose independent rect. 11 16
635 168.97 temperature 30 1440 < th dose independent rect. 11 14
638 168.97 temperature 30 1440 < th dose independent rect. 11 20
640 168.98 temperature 30 1440 < th dose independent rect. 11 11
651 169.02 temperature 30 1440 < th dose independent rect. 11 8
693 169.09 radiation 20 1440 > th dose independent rect. 16 15
705 169.11 temperature 30 1440 > th dose independent rect. 9 10
734 169.14 temperature 30 1440 > th dose independent rect. 11 8
767 169.23 temperature 30 1440 < th dose independent rect. 17 22
861 169.47 temperature 30 1440 < th dose independent rect. 6 21
874 169.49 temperature 30 1440 < th dose independent rect. 6 16
876 169.49 temperature 30 1440 < th dose independent rect. 6 19
888 169.50 temperature 30 1440 < th dose independent rect. 24 22
889 169.50 temperature 30 1440 < th dose independent rect. 2 23
894 169.51 temperature 30 1440 < th dose independent no NA NA
900 169.51 temperature 30 1440 < th dose independent rect. 2 20
907 169.51 temperature 30 1440 < th dose independent rect. 20 23
944 169.53 temperature 30 1440 < th dose independent rect. 6 13
966 169.54 temperature 30 1440 < th dose independent rect. 2 17