Os07g0264900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Hypothetical protein.
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Os07g0264900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 45.81 | 0.318 | 9.56 | -1.92 | 0.348 | 0.707 | -0.219 | -2.42 | -0.185 | 9.19 | 10.26 | 1703 | -- | -- |
| 49.67 | 0.328 | 9.49 | -1.5 | 0.356 | 0.709 | -0.213 | -- | -0.0568 | 9.41 | 7.392 | 4853 | -- | -- |
| 45.97 | 0.316 | 9.56 | -1.93 | 0.346 | 0.711 | -- | -2.42 | -0.186 | 9.13 | 10.26 | 1680 | -- | -- |
| 49.85 | 0.329 | 9.49 | -1.51 | 0.355 | 0.71 | -- | -- | -0.0567 | 9.35 | 7.07 | 4836 | -- | -- |
| 52.6 | 0.338 | 9.57 | -1.92 | -- | 0.693 | -- | -2.39 | -0.18 | -- | 10.01 | 1554 | -- | -- |
| 58.4 | 0.358 | 9.46 | -1.16 | 0.33 | -- | -0.257 | -- | 0.0839 | 9.37 | -- | -- | -- | -- |
| 58.64 | 0.359 | 9.46 | -1.17 | 0.332 | -- | -- | -- | 0.0833 | 9.25 | -- | -- | -- | -- |
| 56.54 | 0.35 | 9.5 | -1.49 | -- | 0.69 | -- | -- | -0.0502 | -- | 10.5 | 4439 | -- | -- |
| 93.75 | 0.453 | 9.43 | -- | 0.347 | -0.317 | -- | -- | 0.207 | 10.2 | 28.32 | 4231 | -- | -- |
| 65.04 | 0.377 | 9.47 | -1.17 | -- | -- | -- | -- | 0.0848 | -- | -- | -- | -- | -- |
| 94.9 | 0.456 | 9.43 | -- | 0.333 | -- | -- | -- | 0.214 | 9.51 | -- | -- | -- | -- |
| 81.45 | 0.42 | 9.39 | -- | -- | -0.641 | -- | -- | 0.464 | -- | 25.6 | 47520 | -- | -- |
| 101.42 | 0.47 | 9.44 | -- | -- | -- | -- | -- | 0.215 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 44.56 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 11 |
| 2 | 44.83 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 12 | 45.05 | temperature | 10 | 1440 | > th | dose dependent | rect. | 20 | 1 |
| 13 | 45.07 | temperature | 30 | 1440 | < th | dose dependent | rect. | 20 | 1 |
| 22 | 45.44 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 7 |
| 23 | 45.44 | temperature | 10 | 1440 | > th | dose dependent | rect. | 17 | 10 |
| 25 | 45.45 | temperature | 30 | 1440 | < th | dose dependent | rect. | 17 | 10 |
| 28 | 45.46 | temperature | 10 | 1440 | > th | dose dependent | rect. | 18 | 7 |
| 72 | 45.54 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 11 |
| 73 | 45.54 | temperature | 10 | 1440 | > th | dose dependent | sin | 13 | NA |
| 87 | 45.56 | temperature | 30 | 1440 | < th | dose dependent | sin | 13 | NA |
| 402 | 45.95 | temperature | 20 | 4320 | > th | dose dependent | rect. | 14 | 1 |
| 445 | 45.99 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 7 |
| 459 | 46.01 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 587 | 46.11 | temperature | 10 | 1440 | > th | dose dependent | no | NA | NA |
| 638 | 46.14 | temperature | 10 | 1440 | > th | dose dependent | rect. | 23 | 23 |
| 663 | 46.16 | temperature | 10 | 1440 | > th | dose dependent | rect. | 4 | 23 |
| 670 | 46.17 | temperature | 30 | 1440 | < th | dose dependent | no | NA | NA |
| 724 | 46.19 | temperature | 30 | 1440 | < th | dose dependent | rect. | 23 | 23 |
| 749 | 46.21 | temperature | 30 | 1440 | < th | dose dependent | rect. | 2 | 23 |
| 750 | 46.21 | temperature | 30 | 1440 | < th | dose dependent | rect. | 4 | 23 |