Os07g0249600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Dcp1-like decapping family protein.
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Os07g0249600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Dcp1-like decapping family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 48.49 | 0.327 | 9.21 | 0.978 | 1.13 | 0.118 | 0.176 | 4.97 | -0.0285 | 11 | 13.83 | 11138 | -- | -- |
| 70.07 | 0.393 | 9.44 | -0.177 | 1.24 | -0.658 | 0.157 | -- | -0.355 | 11.4 | -7.222 | 47520 | -- | -- |
| 48.58 | 0.325 | 9.21 | 0.984 | 1.11 | 0.123 | -- | 4.98 | -0.0197 | 11 | 13.22 | 11286 | -- | -- |
| 70.17 | 0.393 | 9.44 | -0.172 | 1.24 | -0.653 | -- | -- | -0.355 | 11.4 | -7.222 | 47520 | -- | -- |
| 126.84 | 0.525 | 9.23 | 1.01 | -- | 0.0708 | -- | 4.96 | -0.0188 | -- | 13.09 | 11528 | -- | -- |
| 74.16 | 0.404 | 9.46 | -0.303 | 1.12 | -- | 0.113 | -- | -0.447 | 11 | -- | -- | -- | -- |
| 74.21 | 0.403 | 9.46 | -0.298 | 1.12 | -- | -- | -- | -0.447 | 11 | -- | -- | -- | -- |
| 148.18 | 0.569 | 9.5 | -0.413 | -- | 0.494 | -- | -- | -0.521 | -- | 13.09 | 11528 | -- | -- |
| 70.88 | 0.394 | 9.43 | -- | 1.26 | -0.736 | -- | -- | -0.326 | 11.5 | -7.222 | 47520 | -- | -- |
| 151.7 | 0.576 | 9.49 | -0.323 | -- | -- | -- | -- | -0.455 | -- | -- | -- | -- | -- |
| 76.56 | 0.409 | 9.45 | -- | 1.12 | -- | -- | -- | -0.414 | 11 | -- | -- | -- | -- |
| 147.51 | 0.566 | 9.45 | -- | -- | -0.438 | -- | -- | -0.293 | -- | 6.09 | 39815 | -- | -- |
| 154.45 | 0.58 | 9.48 | -- | -- | -- | -- | -- | -0.419 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 45.17 | temperature | 20 | 14400 | < th | dose independent | rect. | 20 | 5 |
| 6 | 45.33 | temperature | 20 | 14400 | > th | dose independent | rect. | 18 | 8 |
| 9 | 45.40 | temperature | 20 | 14400 | > th | dose independent | rect. | 20 | 5 |
| 33 | 45.76 | wind | 7 | 43200 | > th | dose independent | rect. | 3 | 11 |
| 39 | 45.81 | wind | 7 | 43200 | < th | dose independent | rect. | 3 | 11 |
| 53 | 45.92 | wind | 7 | 43200 | > th | dose independent | rect. | 20 | 18 |
| 63 | 45.99 | wind | 7 | 43200 | < th | dose independent | rect. | 20 | 18 |
| 67 | 46.01 | temperature | 20 | 14400 | > th | dose independent | sin | 14 | NA |
| 70 | 46.04 | temperature | 20 | 14400 | < th | dose independent | sin | 14 | NA |
| 102 | 46.19 | wind | 5 | 43200 | > th | dose dependent | rect. | 9 | 4 |
| 103 | 46.20 | wind | 7 | 43200 | > th | dose independent | rect. | 7 | 6 |
| 115 | 46.22 | wind | 5 | 43200 | > th | dose dependent | rect. | 4 | 10 |
| 117 | 46.24 | wind | 7 | 43200 | > th | dose independent | sin | 5 | NA |
| 121 | 46.25 | wind | 7 | 43200 | < th | dose independent | sin | 5 | NA |
| 143 | 46.37 | wind | 5 | 43200 | > th | dose dependent | rect. | 7 | 7 |
| 150 | 46.39 | wind | 5 | 43200 | > th | dose dependent | rect. | 18 | 20 |
| 170 | 46.45 | temperature | 20 | 14400 | > th | dose independent | rect. | 18 | 15 |
| 177 | 46.48 | temperature | 20 | 14400 | < th | dose independent | rect. | 18 | 15 |
| 183 | 46.49 | wind | 5 | 43200 | > th | dose dependent | sin | 4 | NA |
| 208 | 46.55 | wind | 7 | 43200 | > th | dose independent | rect. | 9 | 3 |
| 239 | 46.60 | wind | 7 | 43200 | < th | dose independent | rect. | 9 | 3 |
| 291 | 46.69 | wind | 5 | 43200 | < th | dose independent | sin | 10 | NA |
| 292 | 46.69 | humidity | 90 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 305 | 46.70 | wind | 3 | 43200 | > th | dose dependent | sin | 10 | NA |
| 346 | 46.76 | radiation | 10 | 4320 | > th | dose dependent | rect. | 17 | 15 |
| 399 | 46.84 | wind | 5 | 43200 | > th | dose independent | sin | 10 | NA |
| 466 | 46.92 | wind | 3 | 43200 | > th | dose dependent | rect. | 18 | 15 |
| 551 | 47.04 | radiation | 10 | 4320 | > th | dose dependent | rect. | 5 | 3 |
| 597 | 47.09 | temperature | 20 | 14400 | > th | dose independent | rect. | 4 | 22 |
| 636 | 47.13 | temperature | 20 | 14400 | > th | dose independent | rect. | 7 | 23 |
| 726 | 47.23 | temperature | 20 | 14400 | > th | dose independent | no | NA | NA |
| 751 | 47.26 | humidity | 90 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 768 | 47.27 | temperature | 20 | 14400 | < th | dose independent | rect. | 7 | 23 |
| 782 | 47.28 | temperature | 20 | 4320 | > th | dose dependent | rect. | 10 | 1 |
| 833 | 47.33 | temperature | 20 | 14400 | < th | dose independent | rect. | 4 | 23 |
| 867 | 47.37 | temperature | 20 | 14400 | > th | dose independent | rect. | 24 | 23 |
| 907 | 47.41 | temperature | 20 | 14400 | < th | dose independent | no | NA | NA |
| 974 | 47.47 | humidity | 90 | 43200 | > th | dose dependent | rect. | 10 | 1 |