Os07g0247100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : O-methyltransferase, N-terminal domain containing protein.
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Os07g0247100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : O-methyltransferase, N-terminal domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 37.88 | 0.289 | 11.5 | -1.96 | 0.823 | 1.19 | 0.511 | -0.273 | -0.628 | 22.5 | 23.3 | 202 | -- | -- |
| 37.91 | 0.287 | 11.5 | -1.91 | 0.819 | 1.17 | 0.521 | -- | -0.617 | 22.5 | 23.24 | 206 | -- | -- |
| 38.88 | 0.29 | 11.5 | -1.98 | 0.788 | 1.18 | -- | -0.37 | -0.631 | 22.5 | 23.26 | 236 | -- | -- |
| 38.97 | 0.291 | 11.5 | -1.94 | 0.782 | 1.15 | -- | -- | -0.617 | 22.5 | 23.18 | 242 | -- | -- |
| 59.54 | 0.359 | 11.5 | -2.18 | -- | 1.45 | -- | -0.973 | -0.684 | -- | 23.51 | 602 | -- | -- |
| 60.83 | 0.366 | 11.5 | -1.69 | 0.958 | -- | 0.657 | -- | -0.456 | 20.4 | -- | -- | -- | -- |
| 62.19 | 0.369 | 11.5 | -1.71 | 0.957 | -- | -- | -- | -0.456 | 20.4 | -- | -- | -- | -- |
| 59.98 | 0.361 | 11.5 | -2 | -- | 1.37 | -- | -- | -0.638 | -- | 23.53 | 607 | -- | -- |
| 130.18 | 0.531 | 11.4 | -- | 0.902 | 0.738 | -- | -- | -0.28 | 21.3 | 26.47 | 120 | -- | -- |
| 113.12 | 0.497 | 11.4 | -1.71 | -- | -- | -- | -- | -0.466 | -- | -- | -- | -- | -- |
| 138.92 | 0.551 | 11.4 | -- | 0.965 | -- | -- | -- | -0.266 | 20.2 | -- | -- | -- | -- |
| 159.49 | 0.588 | 11.4 | -- | -- | 1.02 | -- | -- | -0.34 | -- | 24.67 | 543 | -- | -- |
| 190.4 | 0.644 | 11.4 | -- | -- | -- | -- | -- | -0.276 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 36.73 | temperature | 20 | 270 | > th | dose dependent | sin | 0 | NA |
| 2 | 36.98 | temperature | 20 | 270 | > th | dose dependent | rect. | 7 | 11 |
| 5 | 37.14 | temperature | 25 | 270 | > th | dose dependent | rect. | 18 | 22 |
| 11 | 37.40 | temperature | 10 | 270 | > th | dose dependent | sin | 0 | NA |
| 25 | 37.93 | temperature | 25 | 90 | > th | dose dependent | rect. | 8 | 21 |
| 31 | 38.00 | temperature | 25 | 90 | > th | dose dependent | rect. | 8 | 16 |
| 41 | 38.09 | temperature | 30 | 270 | < th | dose dependent | sin | 23 | NA |
| 95 | 38.57 | temperature | 10 | 90 | > th | dose dependent | sin | 21 | NA |
| 118 | 38.79 | temperature | 25 | 90 | > th | dose dependent | rect. | 1 | 23 |
| 136 | 38.90 | temperature | 20 | 720 | > th | dose dependent | rect. | 6 | 7 |
| 144 | 38.93 | temperature | 25 | 90 | > th | dose dependent | no | NA | NA |
| 158 | 38.98 | temperature | 25 | 90 | > th | dose dependent | rect. | 23 | 23 |
| 190 | 39.08 | temperature | 10 | 720 | > th | dose dependent | rect. | 6 | 7 |
| 328 | 39.41 | temperature | 30 | 720 | < th | dose dependent | rect. | 4 | 12 |
| 330 | 39.41 | temperature | 10 | 720 | > th | dose dependent | rect. | 2 | 16 |
| 442 | 39.70 | temperature | 30 | 720 | < th | dose dependent | sin | 2 | NA |
| 710 | 40.53 | temperature | 30 | 270 | < th | dose dependent | rect. | 7 | 14 |