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Os07g0227400

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Similar to RNA binding/signal transduction protein QkI-4.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 10.9 (0.0168) R2 : 0.0556
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.183 (0.0354) R2dN8 : 0.0718 R2N8 : 0.0556
σ : 0.317
deviance : 46.07
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
16.06 0.188 10.9 0.649 0.398 -0.614 0.431 -0.568 0.168 19.6 28.7 10 -- --
16.53 0.189 10.9 0.557 0.389 -0.621 0.367 -- 0.158 19.5 30.78 12 -- --
16.56 0.19 10.9 0.634 0.399 -0.601 -- -0.512 0.169 19.4 28.71 10 -- --
16.93 0.192 10.9 0.56 0.391 -0.618 -- -- 0.159 19.4 30.84 12 -- --
21.41 0.215 10.8 0.596 -- -0.888 -- -0.679 0.163 -- 39.51 337 -- --
21.35 0.217 10.8 0.694 0.482 -- 0.442 -- 0.268 17.8 -- -- -- --
21.82 0.219 10.8 0.691 0.485 -- -- -- 0.27 17.8 -- -- -- --
21.72 0.217 10.9 0.489 -- -0.905 -- -- 0.134 -- 45.13 346 -- --
24.17 0.229 10.9 -- 0.387 -0.895 -- -- 0.0855 20.3 30.96 17 -- --
34.01 0.273 10.8 0.676 -- -- -- -- 0.259 -- -- -- -- --
34.41 0.274 10.9 -- 0.474 -- -- -- 0.193 17.8 -- -- -- --
27.57 0.245 10.9 -- -- -1.07 -- -- 0.0601 -- 34.8 356 -- --
46.07 0.317 10.9 -- -- -- -- -- 0.183 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 15.47 temperature 30 10 < th dose dependent rect. 10 20
3 15.57 temperature 10 270 > th dose dependent rect. 3 22
8 15.67 temperature 20 10 > th dose dependent rect. 6 20
11 15.75 wind 1 43200 > th dose independent rect. 4 4
20 15.87 temperature 25 1440 < th dose dependent rect. 21 1
30 15.96 temperature 30 10 < th dose dependent rect. 1 23
38 16.02 temperature 25 1440 < th dose dependent rect. 17 6
46 16.06 temperature 30 90 < th dose dependent rect. 1 22
47 16.07 wind 1 43200 < th dose dependent rect. 4 4
54 16.08 temperature 20 10 > th dose dependent rect. 13 23
81 16.16 temperature 20 10 > th dose dependent rect. 23 23
82 16.17 temperature 30 10 < th dose dependent no NA NA
86 16.17 temperature 20 10 > th dose dependent rect. 3 23
95 16.19 temperature 30 10 < th dose dependent rect. 15 23
96 16.19 temperature 30 10 < th dose dependent rect. 17 23
97 16.20 wind 1 43200 < th dose independent rect. 4 4
98 16.20 temperature 20 10 > th dose dependent no NA NA
100 16.20 temperature 30 10 < th dose dependent rect. 19 23
109 16.22 temperature 20 10 > th dose dependent rect. 21 23
110 16.22 temperature 30 10 < th dose dependent rect. 13 23
128 16.27 temperature 25 1440 < th dose dependent sin 16 NA
164 16.32 temperature 10 720 > th dose dependent rect. 21 19
172 16.33 temperature 25 1440 < th dose dependent rect. 11 15
203 16.38 temperature 25 10 > th dose independent rect. 6 14
247 16.44 temperature 30 270 < th dose dependent rect. 23 21
267 16.47 temperature 20 10 > th dose dependent rect. 23 21
281 16.50 temperature 20 1440 > th dose dependent rect. 2 1
299 16.52 temperature 20 1440 > th dose dependent rect. 24 5
300 16.52 temperature 20 10 > th dose dependent rect. 6 14
306 16.52 temperature 30 10 < th dose dependent rect. 21 23
317 16.55 temperature 20 4320 > th dose independent rect. 21 2
319 16.55 wind 1 43200 > th dose dependent rect. 1 1
334 16.56 temperature 25 90 < th dose independent rect. 1 22
344 16.57 temperature 20 10 > th dose dependent rect. 6 16
351 16.58 temperature 25 90 < th dose independent rect. 7 23
359 16.58 temperature 20 10 > th dose dependent rect. 1 23
383 16.61 wind 3 43200 < th dose dependent rect. 5 1
413 16.65 temperature 20 4320 < th dose independent rect. 21 2
424 16.65 temperature 25 90 < th dose dependent rect. 1 20
426 16.65 temperature 25 1440 < th dose dependent rect. 16 20
431 16.65 temperature 20 10 > th dose dependent rect. 15 23
458 16.67 temperature 25 720 < th dose dependent rect. 1 21
482 16.68 temperature 25 1440 < th dose dependent rect. 4 23
488 16.69 temperature 25 1440 < th dose dependent no NA NA
501 16.69 temperature 30 10 < th dose dependent rect. 3 23
505 16.70 temperature 25 90 < th dose independent rect. 9 21
533 16.71 temperature 25 1440 < th dose dependent rect. 20 23
587 16.75 temperature 10 720 > th dose dependent rect. 20 13
602 16.76 temperature 20 1440 < th dose independent rect. 4 1
641 16.79 temperature 20 1440 > th dose independent rect. 4 1
643 16.79 temperature 25 10 < th dose dependent sin 22 NA
644 16.79 temperature 25 1440 < th dose dependent rect. 4 1
721 16.84 temperature 10 720 > th dose dependent rect. 21 11
778 16.88 temperature 10 720 > th dose dependent rect. 12 21
783 16.89 temperature 25 30 > th dose independent rect. 24 20
837 16.92 temperature 25 90 < th dose independent rect. 1 20
880 16.94 temperature 20 720 > th dose dependent rect. 21 13
894 16.95 temperature 25 1440 < th dose independent rect. 10 13
899 16.95 temperature 10 720 > th dose dependent rect. 4 5
923 16.96 temperature 25 90 > th dose independent rect. 4 21
981 16.99 temperature 25 10 > th dose independent rect. 6 19