Os07g0206900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF642 family protein.
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Os07g0206900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF642 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = sin)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 286.17 | 0.795 | 5.27 | -3.41 | 1.8 | -1.35 | -0.89 | -4.82 | -1.3 | 7.52 | 89.84 | 366 | 0.00219 | -- |
| 330.73 | 0.847 | 5.31 | -3.3 | 1.91 | -1.65 | -2.6 | -- | -1.32 | 8.14 | 89.81 | 373 | 0.00124 | -- |
| 287.87 | 0.79 | 5.26 | -3.44 | 1.79 | -1.3 | -- | -5.27 | -1.3 | 7.36 | 89.77 | 366 | 0.225 | -- |
| 349.39 | 0.871 | 5.31 | -3.37 | 1.93 | -1.25 | -- | -- | -1.32 | 6.83 | 89.58 | 359 | 1.34 | -- |
| 404 | 0.936 | 5.34 | -3.39 | -- | -1.96 | -- | -5.22 | -1.19 | -- | 89.97 | 893 | 0.00079 | -- |
| 377.11 | 0.91 | 5.34 | -3.18 | 1.67 | -- | -0.71 | -- | -1.4 | 6.14 | -- | -- | -- | -- |
| 377.92 | 0.91 | 5.34 | -3.19 | 1.67 | -- | -- | -- | -1.4 | 5.95 | -- | -- | -- | -- |
| 428.07 | 0.964 | 5.34 | -3.23 | -- | -2.11 | -- | -- | -1.19 | -- | 89 | 984 | 0.00213 | -- |
| 603.53 | 1.14 | 5.28 | -- | 1.53 | -2.41 | -- | -- | -1.08 | 6.9 | 77 | 426 | 2.18 | -- |
| 522.35 | 1.07 | 5.37 | -3.14 | -- | -- | -- | -- | -1.36 | -- | -- | -- | -- | -- |
| 645.5 | 1.19 | 5.26 | -- | 1.62 | -- | -- | -- | -1.05 | 6.05 | -- | -- | -- | -- |
| 656.44 | 1.19 | 5.29 | -- | -- | -1.81 | -- | -- | -0.962 | -- | 76.88 | 791 | 0.09 | -- |
| 781.9 | 1.31 | 5.29 | -- | -- | -- | -- | -- | -1.01 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 284.19 | humidity | 90 | 270 | < th | dose independent | rect. | 23 | 15 |
| 11 | 293.02 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 8 | 6 |
| 13 | 293.72 | humidity | 90 | 270 | < th | dose independent | sin | 6 | NA |
| 17 | 294.84 | temperature | 20 | 720 | > th | dose dependent | rect. | 17 | 5 |
| 18 | 294.94 | wind | 9 | 4320 | < th | dose independent | rect. | 18 | 8 |
| 20 | 295.11 | humidity | 80 | 90 | > th | dose dependent | sin | 7 | NA |
| 54 | 299.66 | radiation | 1 | 14400 | < th | dose dependent | rect. | 23 | 5 |
| 56 | 299.87 | temperature | 20 | 720 | > th | dose independent | rect. | 21 | 1 |
| 57 | 299.92 | wind | 9 | 4320 | < th | dose independent | rect. | 18 | 5 |
| 65 | 300.26 | humidity | 80 | 90 | > th | dose dependent | rect. | 23 | 12 |
| 75 | 300.74 | humidity | 80 | 90 | > th | dose dependent | rect. | 21 | 14 |
| 86 | 301.46 | humidity | 90 | 270 | > th | dose independent | sin | 7 | NA |
| 88 | 301.50 | humidity | 90 | 270 | > th | dose independent | rect. | 23 | 10 |
| 94 | 301.66 | humidity | 90 | 30 | > th | dose independent | sin | 6 | NA |
| 100 | 301.99 | temperature | 15 | 270 | > th | dose dependent | rect. | 15 | 15 |
| 108 | 302.26 | wind | 9 | 4320 | < th | dose independent | rect. | 18 | 3 |
| 115 | 302.42 | temperature | 20 | 720 | > th | dose independent | rect. | 10 | 13 |
| 116 | 302.48 | temperature | 20 | 270 | > th | dose independent | rect. | 15 | 15 |
| 152 | 303.62 | humidity | 90 | 270 | > th | dose independent | rect. | 23 | 12 |
| 157 | 303.74 | humidity | 90 | 270 | > th | dose independent | rect. | 23 | 14 |
| 173 | 304.02 | temperature | 15 | 10 | > th | dose dependent | rect. | 16 | 15 |
| 179 | 304.15 | radiation | 1 | 14400 | < th | dose dependent | rect. | 22 | 3 |
| 189 | 304.31 | wind | 7 | 4320 | > th | dose dependent | rect. | 18 | 3 |
| 207 | 304.82 | temperature | 10 | 30 | > th | dose dependent | rect. | 16 | 17 |
| 214 | 304.97 | wind | 9 | 4320 | > th | dose independent | rect. | 18 | 6 |
| 216 | 304.98 | wind | 9 | 4320 | > th | dose independent | rect. | 18 | 4 |
| 227 | 305.10 | atmosphere | 1005 | 14400 | > th | dose independent | rect. | 5 | 2 |
| 244 | 305.29 | temperature | 20 | 720 | > th | dose dependent | sin | 16 | NA |
| 310 | 306.05 | temperature | 20 | 720 | > th | dose independent | rect. | 18 | 7 |
| 317 | 306.13 | temperature | 20 | 720 | > th | dose independent | rect. | 18 | 5 |
| 318 | 306.15 | atmosphere | 1005 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 323 | 306.19 | wind | 9 | 4320 | > th | dose dependent | rect. | 18 | 8 |
| 346 | 306.40 | humidity | 50 | 720 | > th | dose dependent | rect. | 21 | 8 |
| 406 | 307.12 | temperature | 20 | 720 | > th | dose independent | sin | 20 | NA |
| 429 | 307.35 | atmosphere | 1005 | 14400 | < th | dose independent | rect. | 3 | 8 |
| 477 | 307.60 | temperature | 30 | 720 | < th | dose independent | rect. | 17 | 17 |
| 505 | 307.79 | temperature | 20 | 720 | > th | dose independent | rect. | 13 | 9 |
| 638 | 308.88 | humidity | 90 | 270 | > th | dose independent | rect. | 23 | 7 |
| 744 | 309.46 | radiation | 1 | 14400 | < th | dose dependent | rect. | 19 | 6 |
| 757 | 309.57 | temperature | 30 | 720 | < th | dose independent | rect. | 15 | 6 |
| 779 | 309.73 | humidity | 90 | 30 | > th | dose independent | rect. | 21 | 12 |
| 785 | 309.76 | temperature | 10 | 720 | > th | dose dependent | rect. | 10 | 13 |
| 817 | 309.94 | humidity | 90 | 270 | > th | dose independent | rect. | 1 | 8 |
| 842 | 310.06 | humidity | 60 | 720 | > th | dose dependent | rect. | 23 | 7 |
| 918 | 310.44 | humidity | 80 | 270 | > th | dose dependent | rect. | 1 | 8 |
| 960 | 310.70 | atmosphere | 1005 | 14400 | < th | dose independent | rect. | 9 | 2 |