Os07g0205000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Cytochrome-C reductase 14 kDa subunit (EC 1.10.2.2) (Fragment).
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Os07g0205000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Cytochrome-C reductase 14 kDa subunit (EC 1.10.2.2) (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 27.09 | 0.245 | 11.2 | -0.861 | 0.232 | -1.15 | 0.352 | -0.701 | -0.225 | 11.7 | 24.23 | 998 | -- | -- |
| 27.68 | 0.245 | 11.2 | -0.949 | 0.239 | -1.05 | 0.338 | -- | -0.231 | 11.5 | 24.64 | 1027 | -- | -- |
| 27.52 | 0.244 | 11.2 | -0.881 | 0.232 | -1.13 | -- | -0.498 | -0.238 | 11.2 | 24.34 | 1022 | -- | -- |
| 27.78 | 0.245 | 11.2 | -0.957 | 0.225 | -1.07 | -- | -- | -0.246 | 11.2 | 24.55 | 1032 | -- | -- |
| 30.18 | 0.256 | 11.2 | -0.944 | -- | -0.936 | -- | -0.064 | -0.224 | -- | 30.82 | 1480 | -- | -- |
| 43.65 | 0.31 | 11.1 | -0.665 | 0.0957 | -- | 0.345 | -- | -0.0355 | 12.7 | -- | -- | -- | -- |
| 43.91 | 0.31 | 11.1 | -0.654 | 0.115 | -- | -- | -- | -0.0351 | 10.3 | -- | -- | -- | -- |
| 30.18 | 0.256 | 11.2 | -0.956 | -- | -0.935 | -- | -- | -0.228 | -- | 31.1 | 1481 | -- | -- |
| 48.93 | 0.326 | 11.1 | -- | 0.183 | -0.626 | -- | -- | -0.0745 | 10.9 | 24.7 | 977 | -- | -- |
| 44.72 | 0.312 | 11.1 | -0.655 | -- | -- | -- | -- | -0.0354 | -- | -- | -- | -- | -- |
| 55.16 | 0.347 | 11.1 | -- | 0.119 | -- | -- | -- | 0.0376 | 10.7 | -- | -- | -- | -- |
| 50 | 0.33 | 11.1 | -- | -- | -0.628 | -- | -- | -0.0337 | -- | 36.02 | 1480 | -- | -- |
| 56.04 | 0.349 | 11.1 | -- | -- | -- | -- | -- | 0.0373 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 24.63 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 16 |
| 2 | 24.71 | temperature | 30 | 720 | < th | dose dependent | sin | 4 | NA |
| 3 | 24.74 | temperature | 30 | 720 | < th | dose dependent | rect. | 24 | 16 |
| 4 | 24.75 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 14 |
| 25 | 25.13 | temperature | 15 | 720 | > th | dose dependent | sin | 5 | NA |
| 36 | 25.28 | temperature | 25 | 720 | < th | dose dependent | rect. | 3 | 15 |
| 242 | 26.58 | temperature | 30 | 720 | < th | dose dependent | rect. | 5 | 6 |
| 392 | 27.40 | temperature | 20 | 10 | > th | dose dependent | rect. | 3 | 21 |
| 469 | 27.76 | temperature | 20 | 10 | > th | dose dependent | rect. | 3 | 19 |
| 528 | 27.97 | temperature | 25 | 270 | > th | dose independent | sin | 0 | NA |
| 570 | 28.10 | temperature | 15 | 10 | > th | dose dependent | rect. | 3 | 23 |
| 600 | 28.20 | temperature | 20 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 612 | 28.23 | temperature | 30 | 270 | < th | dose dependent | rect. | 4 | 23 |
| 628 | 28.28 | temperature | 30 | 1440 | < th | dose dependent | rect. | 15 | 11 |
| 637 | 28.31 | temperature | 10 | 1440 | > th | dose dependent | rect. | 20 | 1 |
| 643 | 28.32 | temperature | 30 | 720 | < th | dose dependent | no | NA | NA |
| 645 | 28.33 | temperature | 20 | 720 | > th | dose independent | rect. | 3 | 12 |
| 651 | 28.34 | temperature | 30 | 1440 | < th | dose dependent | sin | 15 | NA |
| 656 | 28.35 | temperature | 30 | 1440 | < th | dose dependent | rect. | 20 | 1 |
| 693 | 28.42 | temperature | 25 | 270 | < th | dose independent | sin | 23 | NA |
| 697 | 28.42 | temperature | 10 | 1440 | > th | dose dependent | rect. | 18 | 8 |
| 699 | 28.42 | temperature | 30 | 1440 | < th | dose dependent | rect. | 9 | 19 |
| 724 | 28.46 | temperature | 30 | 1440 | < th | dose dependent | rect. | 23 | 1 |
| 726 | 28.46 | temperature | 10 | 1440 | > th | dose dependent | rect. | 19 | 5 |
| 837 | 28.53 | temperature | 10 | 1440 | > th | dose dependent | rect. | 23 | 1 |
| 894 | 28.55 | temperature | 30 | 1440 | < th | dose dependent | rect. | 3 | 23 |
| 930 | 28.58 | temperature | 25 | 270 | > th | dose independent | rect. | 3 | 17 |
| 963 | 28.60 | temperature | 10 | 1440 | > th | dose dependent | sin | 13 | NA |
| 976 | 28.61 | temperature | 25 | 270 | > th | dose independent | rect. | 5 | 15 |
| 992 | 28.62 | temperature | 25 | 270 | < th | dose independent | rect. | 7 | 11 |