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Os07g0200000

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 8.84 (0.0185) R2 : 0.0243
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.131 (0.0389) R2dN8 : 0.0313 R2N8 : 0.0243
σ : 0.348
deviance : 55.48
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = > th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
34.17 0.275 8.82 0.514 0.3 0.527 0.0423 -0.339 0.244 0.622 93 179 -- --
33.9 0.271 8.83 0.518 0.305 0.618 0.0826 -- 0.224 0.663 94 124 -- --
33.86 0.271 8.83 0.508 0.322 0.68 -- -0.252 0.218 0.444 94 145 -- --
33.85 0.271 8.82 0.518 0.308 0.636 -- -- 0.234 0.742 94 128 -- --
39.32 0.292 8.81 0.513 -- 0.693 -- -0.403 0.261 -- 93.46 133 -- --
37.65 0.288 8.83 0.551 0.395 -- 0.0148 -- 0.185 2.02 -- -- -- --
37.65 0.287 8.83 0.55 0.395 -- -- -- 0.184 2.03 -- -- -- --
39.34 0.292 8.81 0.515 -- 0.722 -- -- 0.257 -- 93.67 118 -- --
40.92 0.298 8.83 -- 0.31 0.702 -- -- 0.187 0.535 93.9 145 -- --
47.02 0.32 8.83 0.567 -- -- -- -- 0.194 -- -- -- -- --
45.63 0.316 8.84 -- 0.405 -- -- -- 0.123 2.06 -- -- -- --
46.21 0.317 8.82 -- -- 0.7 -- -- 0.209 -- 93.26 130 -- --
55.48 0.348 8.84 -- -- -- -- -- 0.131 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 29.93 temperature 25 270 < th dose independent rect. 24 9
11 30.66 temperature 25 270 > th dose independent rect. 23 12
25 31.33 temperature 25 90 < th dose independent rect. 3 8
26 31.35 temperature 25 90 < th dose independent rect. 3 6
30 31.51 temperature 25 270 < th dose independent sin 7 NA
33 31.68 temperature 25 270 > th dose independent sin 7 NA
62 32.06 temperature 25 10 < th dose independent rect. 4 4
69 32.16 temperature 20 270 > th dose dependent rect. 6 6
72 32.22 temperature 25 270 < th dose independent rect. 3 2
77 32.27 temperature 25 90 < th dose independent rect. 3 10
99 32.40 temperature 30 90 < th dose dependent rect. 3 8
103 32.42 temperature 20 30 > th dose dependent rect. 7 7
112 32.49 temperature 25 90 < th dose independent rect. 3 15
142 32.65 temperature 30 270 < th dose dependent rect. 1 7
153 32.70 temperature 20 30 > th dose dependent rect. 24 14
156 32.72 temperature 30 90 < th dose dependent rect. 3 6
157 32.73 temperature 15 30 > th dose independent rect. 5 23
160 32.74 temperature 30 10 < th dose dependent rect. 4 15
172 32.78 temperature 15 270 > th dose independent rect. 14 16
174 32.78 temperature 30 90 < th dose dependent rect. 3 15
215 32.91 temperature 20 30 > th dose dependent rect. 24 12
216 32.91 temperature 10 270 > th dose dependent rect. 21 14
228 32.95 temperature 25 10 < th dose independent rect. 4 2
233 32.96 temperature 25 270 > th dose dependent rect. 21 14
247 32.99 temperature 15 1440 > th dose independent rect. 13 7
281 33.05 humidity 90 270 > th dose dependent rect. 3 2
283 33.05 humidity 90 90 > th dose dependent rect. 3 6
289 33.06 humidity 90 90 > th dose dependent rect. 3 4
301 33.08 humidity 90 270 > th dose dependent rect. 1 4
316 33.10 temperature 25 90 > th dose dependent sin 6 NA
318 33.11 temperature 15 1440 > th dose independent rect. 15 5
350 33.15 atmosphere 1000 10 > th dose dependent rect. 19 10
356 33.16 temperature 10 30 > th dose dependent rect. 23 13
366 33.17 temperature 30 90 < th dose dependent rect. 3 12
385 33.20 temperature 15 270 > th dose independent rect. 11 20
419 33.23 temperature 25 30 > th dose dependent rect. 21 15
420 33.23 temperature 25 30 > th dose dependent rect. 21 17
432 33.25 temperature 30 10 < th dose dependent rect. 4 6
453 33.27 temperature 15 270 > th dose independent rect. 10 23
475 33.30 temperature 15 1440 > th dose independent rect. 13 9
489 33.31 atmosphere 1005 10 > th dose dependent rect. 23 6
498 33.32 atmosphere 1010 270 < th dose independent rect. 12 18
502 33.32 temperature 25 30 > th dose dependent rect. 3 9
514 33.33 temperature 15 1440 > th dose independent rect. 13 11
527 33.34 temperature 25 270 > th dose independent rect. 6 6
570 33.37 humidity 90 270 > th dose independent rect. 1 6
634 33.42 humidity 90 10 > th dose dependent rect. 4 4
639 33.42 atmosphere 995 10 > th dose dependent rect. 12 11
649 33.43 humidity 90 10 > th dose dependent rect. 4 6
656 33.44 humidity 90 10 > th dose independent rect. 4 2
658 33.44 humidity 90 10 > th dose independent rect. 4 4
676 33.46 temperature 15 270 > th dose independent rect. 17 9
689 33.47 humidity 90 10 > th dose dependent rect. 4 2
702 33.48 humidity 90 10 > th dose dependent rect. 4 14
781 33.54 atmosphere 995 270 > th dose independent rect. 11 10
802 33.55 humidity 90 90 > th dose dependent rect. 3 18
805 33.56 atmosphere 995 270 > th dose independent rect. 14 16
826 33.58 temperature 15 270 > th dose independent rect. 11 10
828 33.58 temperature 15 1440 > th dose independent rect. 4 16
836 33.59 temperature 15 1440 > th dose independent rect. 15 7
838 33.59 atmosphere 995 270 > th dose independent rect. 2 15
839 33.59 atmosphere 1015 270 < th dose dependent rect. 7 5
840 33.59 atmosphere 1015 10 < th dose dependent rect. 8 6
865 33.62 humidity 90 90 > th dose independent rect. 3 6
903 33.66 humidity 90 90 > th dose independent rect. 3 4
905 33.66 humidity 90 90 > th dose independent rect. 3 8
909 33.66 temperature 15 270 > th dose independent rect. 24 23
915 33.66 temperature 30 10 < th dose dependent rect. 4 11
918 33.66 wind 9 90 < th dose dependent rect. 8 19
919 33.66 wind 9 270 < th dose dependent rect. 6 20
935 33.68 wind 7 270 < th dose independent rect. 21 14
947 33.69 radiation 1 1440 > th dose independent rect. 11 2
961 33.70 atmosphere 1005 270 > th dose dependent rect. 23 3
993 33.72 temperature 15 10 > th dose independent rect. 14 18
994 33.72 atmosphere 995 270 > th dose independent rect. 11 20