BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os07g0200000 Os07g0200000|AK102401
(788 letters)
Database: tair10
27,416 sequences; 11,106,569 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G49830.2 | chr5:20250803-20254766 REVERSE LENGTH=815 806 0.0
AT1G10385.1 | chr1:3403224-3405856 FORWARD LENGTH=755 801 0.0
AT1G10180.1 | chr1:3338381-3341494 REVERSE LENGTH=770 315 9e-86
>AT5G49830.2 | chr5:20250803-20254766 REVERSE LENGTH=815
Length = 814
Score = 806 bits (2081), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/696 (58%), Positives = 521/696 (74%), Gaps = 11/696 (1%)
Query: 72 TMNEKEIRHLCSYLQDLKKASAEEMRRSVYANYAAFIRTSKEISDLEGELLSIRNLLNTQ 131
T + +I+ LCSYL DLK+ASAEEMRRSVYANY AFIRTSKEISDLEGEL SIRNLL+TQ
Sbjct: 105 TFCDGDIKQLCSYLLDLKRASAEEMRRSVYANYPAFIRTSKEISDLEGELSSIRNLLSTQ 164
Query: 132 AALIHGLSEGVQIDSLTSNTEGSAEDDISNVEDQEPSEIQKWSADFPDMLDVLLAERRVX 191
A LIHGL++GV ID + E S + + N ED S+++KW+ +FPD LD LLAERRV
Sbjct: 165 ATLIHGLADGVNIDDDKVSDE-SLANGLLNFEDNGLSDLEKWATEFPDHLDALLAERRVD 223
Query: 192 XXXXXXXXXXXXXXXXKLKQTLTATEIAALRRAVSDNRQKLADQLAEAACQSSTRGIELR 251
K TL+++ +++L+ A+++ +QKLADQLA+AACQ STRG ELR
Sbjct: 224 EALAAFDEGEILVSQANEKHTLSSSVLSSLQFAIAERKQKLADQLAKAACQPSTRGGELR 283
Query: 252 AAASALKRLGDGPRAHSLLLNAHNQRLQCNMQTIHPSSTSYGGAYTAALAQQVFSVVAQA 311
+A +ALKRLGDGPRAH++LL+AH QR Q NMQ++ PSSTSYGGAYTAAL+Q VFS ++QA
Sbjct: 284 SAIAALKRLGDGPRAHTVLLDAHFQRYQYNMQSLRPSSTSYGGAYTAALSQLVFSAISQA 343
Query: 312 LSDSVEVFGDESCYASELVTWATKQVMSFALLVKRHVLSSCXXXXXXXXXXECVQISLGH 371
SDS+ +FG E Y+SELVTWATKQ +F+LLVKRH L+S EC QI+LGH
Sbjct: 344 SSDSLGIFGKEPAYSSELVTWATKQTEAFSLLVKRHALASSAAAGGLRAAAECAQIALGH 403
Query: 372 CSLLEARGLSVAAVLLRQFRPSLEQALYSNIRRIEESTAALAAADDWILTYPPTGIRPLA 431
CSLLEARGLS+ VLL+ F+P +EQAL +N++RIEE+TAA+AAADDW+LT PP G R
Sbjct: 404 CSLLEARGLSLCPVLLKHFKPIVEQALEANLKRIEENTAAMAAADDWVLTSPPAGSR--- 460
Query: 432 RSSAANLALQPKLSNSAHRFNSMVQEFFEDVAPLLSLQLGGSTMDDITKIFNSYVNLLIS 491
A+ A Q KL++SAHRFN MVQ+FFEDV PLLS+QLG ++ + ++FNSYV++L+
Sbjct: 461 ---HASTAFQNKLTSSAHRFNLMVQDFFEDVGPLLSMQLGSKALEGLFRVFNSYVDVLVR 517
Query: 492 ALPGSMEDE-ANIDGLGNKIVRMXXXXXXXXXXXXXXXXXXXXXXPRAAMKLS-SMNHSS 549
ALPGS+E+E N + NKIV+M PRAAMKLS
Sbjct: 518 ALPGSIEEEDPNFESSCNKIVQMAETEANQLALLANASLLADELLPRAAMKLSLDQTGQR 577
Query: 550 MDDLRKRGSDKQNRMPEQREWKRKLQRMVDRLRDSFCRQHALELIFTDEGETHLSADMYI 609
DDLR R D+QNR PEQREWKR+L VD+L+D+FCRQHAL+LIFT+EG++HLSADMY+
Sbjct: 578 TDDLR-RPLDRQNRNPEQREWKRRLLSTVDKLKDAFCRQHALDLIFTEEGDSHLSADMYV 636
Query: 610 SMDNTVEEPEWAPSLIFQELYAKLNRMASIAADMFVGRERFATLLMMRLTETVILWLSED 669
++D E+ ++ PSLIFQEL+AKLNRMAS+AADMFVGRERFA L+MRLTETVILWLS D
Sbjct: 637 NIDENGEDVDFFPSLIFQELFAKLNRMASLAADMFVGRERFAISLLMRLTETVILWLSGD 696
Query: 670 QAFWEEIEQGPKPLGPLGLQQFYLDMQFVIIFG-QGRFLSRHVHQVILDIIDRAMAAFSA 728
Q+FW++IE+GP+PLGPLGL+Q YLDM+FVI F QGR+LSR++H+ +II +A+AAF+A
Sbjct: 697 QSFWDDIEEGPRPLGPLGLRQLYLDMKFVICFASQGRYLSRNLHRGTNEIISKALAAFTA 756
Query: 729 TGMNPDSVLPGDDWFMDVSQEVVSMISGKGRAANGD 764
TG++P S LP DDWF D+ + + +SGK + NGD
Sbjct: 757 TGIDPYSELPEDDWFNDICVDAMERLSGKTKGNNGD 792
>AT1G10385.1 | chr1:3403224-3405856 FORWARD LENGTH=755
Length = 754
Score = 801 bits (2069), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/727 (56%), Positives = 524/727 (72%), Gaps = 12/727 (1%)
Query: 46 VQLADKLKIFKTDNFDPDAYVQSKCQTMNEKEIRHLCSYLQDLKKASAEEMRRSVYANYA 105
+ L+D+LK+FK FDPDAYV SKCQ MNEKE RHL SYL +LKKASAEEMR+SVYANYA
Sbjct: 23 LTLSDRLKVFKGSTFDPDAYVTSKCQRMNEKETRHLSSYLVELKKASAEEMRKSVYANYA 82
Query: 106 AFIRTSKEISDLEGELLSIRNLLNTQAALIHGLSEGVQIDSLTSNTEGSAEDDIS-NVED 164
AFIRTSKEIS LEG+LLS+RNLL+ QAAL+HGL++GV I SL ++ D+ ++++
Sbjct: 83 AFIRTSKEISALEGQLLSMRNLLSAQAALVHGLADGVHISSLCADDADDLRDEDLYDMDN 142
Query: 165 QEPSEIQKWSADFPDMLDVLLAERRVXXXXXXXXXXXXXXXXXKLKQTLTATEIAALRRA 224
++ S I+ W +F D L+VLLAE+RV K+TL+ T + +L A
Sbjct: 143 KQLSNIENWVVEFFDRLEVLLAEKRVEESMAALEEGRRVAVEAHEKRTLSPTTLLSLNNA 202
Query: 225 VSDNRQKLADQLAEAACQSSTRGIELRAAASALKRLGDGPRAHSLLLNAHNQRLQCNMQT 284
+ + RQ+LADQLAEA Q STRG ELR+A +LK+LGDG RAH+LLL ++ +RLQ N+Q+
Sbjct: 203 IKEKRQELADQLAEAISQPSTRGGELRSAVLSLKKLGDGSRAHTLLLRSYERRLQANIQS 262
Query: 285 IHPSSTSYGGAYTAALAQQVFSVVAQALSDSVEVFGDESCYASELVTWATKQVMSFALLV 344
+ S+TSYG A+ AAL+Q VFS +AQA SDS V G++ Y SELVTWA KQ SFALL+
Sbjct: 263 LRASNTSYGVAFAAALSQLVFSTIAQAASDSQAVVGEDPAYTSELVTWAVKQAESFALLL 322
Query: 345 KRHVLSSCXXXXXXXXXXECVQISLGHCSLLEARGLSVAAVLLRQFRPSLEQALYSNIRR 404
KRH L+S ECVQ+ HCS LE+RGL+++ VLL+ FRP +EQAL N++R
Sbjct: 323 KRHTLASSAAAGSLRVTAECVQLCASHCSSLESRGLALSPVLLKHFRPGVEQALTGNLKR 382
Query: 405 IEESTAALAAADDWILTYPPTGIRPLARSSAANLALQPKLSNSAHRFNSMVQEFFEDVAP 464
IE+S+AALAA+DDW L+Y PTG R SS A KLS SA RFNSMVQEF ED P
Sbjct: 383 IEQSSAALAASDDWSLSYTPTGSRA---SSTTPTAPHLKLSISAQRFNSMVQEFLEDAGP 439
Query: 465 L-LSLQLGGSTMDDITKIFNSYVNLLISALPGSMEDEANIDGLGNKIVRMXXXXXXXXXX 523
L +LQL G +D + ++FNSYV+LLI+ALPGS E+E N ++IV++
Sbjct: 440 LDEALQLDGIALDGVLQVFNSYVDLLINALPGSAENEENP---VHRIVKVAETESQQTAL 496
Query: 524 XXXXXXXXXXXXPRAAMKLSSMNHSSMDDLRKRGSDKQNRMPEQREWKRKLQRMVDRLRD 583
PR+A ++ +S R+ SD+QNR PEQREWK+KLQR VDRLRD
Sbjct: 497 LVNALLLADELIPRSASRILPQG-TSQSTPRRGSSDRQNR-PEQREWKKKLQRSVDRLRD 554
Query: 584 SFCRQHALELIFTDEGETHLSADMYISMDNTVEEPEWAPSLIFQELYAKLNRMASIAADM 643
SFCRQHALELIFT+EGE LS+++YI MD T EEPEW PS IFQEL+AKL R+A I +DM
Sbjct: 555 SFCRQHALELIFTEEGEVRLSSEIYILMDETTEEPEWFPSPIFQELFAKLTRIAMIVSDM 614
Query: 644 FVGRERFATLLMMRLTETVILWLSEDQAFWEEIEQGPKPLGPLGLQQFYLDMQFVIIFG- 702
FVGRERFAT+L+MRLTETVILW+S+DQ+FWEE+E G KPLGPLGLQQFYLDM+FV+IF
Sbjct: 615 FVGRERFATILLMRLTETVILWISDDQSFWEEMETGDKPLGPLGLQQFYLDMEFVMIFAS 674
Query: 703 QGRFLSRHVHQVILDIIDRAMAAFSATGMNPDSVLPGDDWFMDVSQEVVSMISGKGR-AA 761
QGR+LSR++HQVI +II RA+ A SATG++P S LP ++WF +V+Q + M+ GKG
Sbjct: 675 QGRYLSRNLHQVIKNIIARAVEAVSATGLDPYSTLPEEEWFAEVAQIAIKMLMGKGNFGG 734
Query: 762 NGDREIN 768
+G+R++
Sbjct: 735 HGERDVT 741
>AT1G10180.1 | chr1:3338381-3341494 REVERSE LENGTH=770
Length = 769
Score = 315 bits (806), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 214/709 (30%), Positives = 346/709 (48%), Gaps = 38/709 (5%)
Query: 58 DNFDPDAYVQSKCQTMNEKEIRHLCSYLQDLKKASAEEMRRSVYANYAAFIRTSKEISDL 117
++ P + + S Q++ EK IR LC L DLK A E M + Y AF+R S+E ++
Sbjct: 14 ESITPQSKIDSVHQSLTEKGIRKLCCELMDLKDA-VENMCGDMRTKYLAFLRISEEAVEM 72
Query: 118 EGELLSIRNLLNTQAALIHGLSEGVQIDSLTSNTEGSAEDDISNVEDQEPSEIQKWSADF 177
E EL+ +R +++Q L+ L GV + N D ED P+E+ ++F
Sbjct: 73 EHELVELRKHISSQGILVQDLMAGVCREMDDWNRLPGDVHDAEVEEDPLPNEVTDPKSEF 132
Query: 178 PDMLDVLLAERRVXXXXXXXXXXXXXXXXXKLKQTLTATEIAALRRAVSDNRQKLADQLA 237
+ +D+LLAE +V K + E+++ + A + + L DQL
Sbjct: 133 LEKIDLLLAEHKVDEALEAMDAEERSSPDLK-----GSVEMSSYKSAFMERKAVLEDQLL 187
Query: 238 EAACQSSTRGIELRAAASALKRLGDGPRAHSLLLNAHNQRLQCNMQTIHPSSTSYGGAYT 297
A Q S EL+ A L RLG GP AH LLL + L+ ++ PS + +
Sbjct: 188 RIAKQPSICVAELKHALIGLIRLGKGPSAHQLLLKFYATSLRRRIEAFLPSCLTCPNTFP 247
Query: 298 AALAQQVFSVVAQALSDSVEVFGDES--CYASELVTWATKQVMSFALLVKRHVLSSCXXX 355
A L++ VFS ++ A +S +FGD+ Y++++V WA ++V LVK + S
Sbjct: 248 ATLSKLVFSNISVATKESAAMFGDDDNPAYSNKVVQWAEREVEYLVRLVKENA-SPSETA 306
Query: 356 XXXXXXXECVQISLGHCSLLEARGLSVAAVLLRQFRPSLEQALYSNIRRIEESTAALAAA 415
C+Q L +C +LE +GL ++ + L FRP +E+ L N RR L
Sbjct: 307 SALRAASICLQDCLNYCKVLEPQGLFLSKLFLVLFRPYVEEVLELNFRRARRVIFDLNET 366
Query: 416 DDWILTYPPTGIRPLARSSAANLALQPKLSNSAHRFNSMVQEFFEDVAPLLSLQLGGSTM 475
D+ L P + L+ + A+ + +++ + RF +VQ+ E + L+ L G S +
Sbjct: 367 DEG-LESPSDFVTILSEFAIASDTM---MTDCSIRFMQIVQDILEQLTHLVVLHFGESVL 422
Query: 476 DDITKIFNSYVNLLISALPGSMEDEANIDGLGNKIVRMXXXXXXXXXXXXXXXXXXXXXX 535
I ++++ Y++ LI ALPG +++ + N ++
Sbjct: 423 TRILQLYDKYIDFLIKALPGHSDEDGLPELQDNTVLARAETDSEQLALLGAAFTILDELL 482
Query: 536 PRAAMKLSSMNHSSMDDLRKRGSDKQNRM-------PEQREWKRKLQRMVDRLRDSFCRQ 588
PR+ +K+ + + G + +N PE +EWKR + + D+LR+ FC Q
Sbjct: 483 PRSLVKVWKLQ------IENGGGEGENSAALNSSAAPELKEWKRHMVQAFDKLRNYFCLQ 536
Query: 589 HALELIFTDEGETHLSADMYISMDNTVEEPE--WAPSLIFQELYAKLNRMASIAADMFVG 646
L I++ EG T L A +Y++ E P+ PSL FQ L++KL ++A IA D+ +G
Sbjct: 537 FVLSFIYSREGLTRLDALIYLT-----ETPDDLHLPSLPFQALFSKLQQLAIIAGDVLLG 591
Query: 647 RERFATLLMMRLTETVILWLSEDQAFWEEIEQGPKPLGPLGLQQFYLDMQFVI---IFGQ 703
+E+ +L+ RLTETVI+WLS +Q FW E PL P GLQQ LDM F + F
Sbjct: 592 KEKLQKILLARLTETVIIWLSNEQEFWSAFEDESNPLQPSGLQQLILDMNFTVEIARFAG 651
Query: 704 GRFLSRHVHQVILDIIDRAMAAFSATGMNPDSVLPGDDWFMDVSQEVVS 752
F H + +I+RA+ FS G+NP S LP +WF + ++ ++
Sbjct: 652 YPFKVVQNHASV--VINRAINIFSERGINPQSSLPKTEWFTEAAKSAIN 698
Database: tair10
Posted date: Dec 8, 2010 11:30 AM
Number of letters in database: 11,106,569
Number of sequences in database: 27,416
Lambda K H
0.318 0.130 0.370
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27416
Number of Hits to DB: 13,558,149
Number of extensions: 493250
Number of successful extensions: 1507
Number of sequences better than 1.0e-05: 3
Number of HSP's gapped: 1488
Number of HSP's successfully gapped: 3
Length of query: 788
Length of database: 11,106,569
Length adjustment: 106
Effective length of query: 682
Effective length of database: 8,200,473
Effective search space: 5592722586
Effective search space used: 5592722586
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 116 (49.3 bits)