Os07g0189700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os07g0189700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 344.46 | 0.872 | 8.4 | 3.37 | 3.93 | -2 | -2.75 | -11.6 | -0.0197 | 21.9 | 1.453 | 5722 | -- | -- |
| 459.32 | 0.998 | 8.63 | 2.06 | 3.73 | -0.787 | -2.11 | -- | -0.326 | 21.8 | 64.3 | 18434 | -- | -- |
| 362.83 | 0.887 | 8.38 | 3.35 | 4.05 | -2.04 | -- | -11.3 | -0.0333 | 22 | 1.367 | 10180 | -- | -- |
| 461.55 | 1 | 8.69 | 1.53 | 4.16 | -0.803 | -- | -- | -0.287 | 21.9 | 12.81 | 18867 | -- | -- |
| 731.6 | 1.27 | 8.54 | 1.38 | -- | 2.6 | -- | -1.95 | -0.267 | -- | 2.193 | 5400 | -- | -- |
| 468.67 | 1.01 | 8.67 | 1.18 | 4.05 | -- | -2.22 | -- | -0.344 | 22 | -- | -- | -- | -- |
| 487.92 | 1.03 | 8.66 | 1.26 | 4.06 | -- | -- | -- | -0.339 | 22 | -- | -- | -- | -- |
| 755.84 | 1.29 | 8.54 | 1.36 | -- | 2.59 | -- | -- | -0.276 | -- | 2.193 | 5400 | -- | -- |
| 491.81 | 1.03 | 8.71 | -- | 3.98 | -0.864 | -- | -- | -0.491 | 21.7 | 4.968 | 18603 | -- | -- |
| 1482.36 | 1.8 | 8.56 | 1.32 | -- | -- | -- | -- | -0.336 | -- | -- | -- | -- | -- |
| 530.07 | 1.08 | 8.7 | -- | 4.07 | -- | -- | -- | -0.48 | 22 | -- | -- | -- | -- |
| 778.58 | 1.3 | 8.56 | -- | -- | 2.7 | -- | -- | -0.372 | -- | 5.599 | 21192 | -- | -- |
| 1528 | 1.82 | 8.59 | -- | -- | -- | -- | -- | -0.482 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 339.12 | temperature | 20.0 | 43200 | < th | dose dependent | rect. | 21 | 1 |
| 9 | 342.64 | temperature | 20.0 | 14400 | < th | dose dependent | sin | 16 | NA |
| 11 | 343.04 | temperature | 20.0 | 14400 | < th | dose dependent | rect. | 14 | 12 |
| 18 | 343.20 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 9 | 2 |
| 30 | 343.65 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 6 | 1 |
| 31 | 343.65 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 6 | 1 |
| 57 | 344.01 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 9 | 2 |
| 73 | 344.30 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 14 | 15 |
| 74 | 344.33 | temperature | 30.0 | 1440 | < th | dose dependent | rect. | 7 | 5 |
| 75 | 344.35 | temperature | 10.0 | 1440 | > th | dose dependent | rect. | 7 | 5 |
| 117 | 345.38 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 14 | 12 |
| 118 | 345.39 | temperature | 20.0 | 43200 | < th | dose independent | rect. | 9 | 13 |
| 125 | 345.46 | temperature | 20.0 | 14400 | < th | dose dependent | rect. | 3 | 21 |
| 137 | 345.63 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 9 | 13 |
| 159 | 345.92 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 14 | 6 |
| 225 | 346.75 | temperature | 20.0 | 14400 | < th | dose dependent | no | NA | NA |
| 242 | 346.84 | temperature | 20.0 | 14400 | < th | dose dependent | rect. | 18 | 23 |
| 322 | 347.31 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 2 | 1 |
| 417 | 347.89 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 9 | 20 |
| 430 | 348.01 | radiation | 1.0 | 4320 | < th | dose dependent | sin | 17 | NA |
| 448 | 348.13 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 6 | 1 |
| 450 | 348.13 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 6 | 1 |
| 498 | 348.58 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 9 | 17 |
| 511 | 348.66 | wind | 9.0 | 43200 | > th | dose independent | rect. | 20 | 15 |
| 577 | 349.16 | temperature | 20.0 | 43200 | < th | dose dependent | rect. | 7 | 1 |
| 632 | 349.54 | wind | 1.0 | 43200 | > th | dose independent | rect. | 13 | 10 |
| 665 | 349.69 | temperature | 20.0 | 43200 | > th | dose independent | sin | 21 | NA |
| 680 | 349.78 | temperature | 20.0 | 43200 | < th | dose independent | sin | 21 | NA |
| 704 | 349.88 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 14 | 20 |
| 754 | 350.11 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 21 | 22 |
| 772 | 350.21 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 9 | 21 |
| 776 | 350.24 | wind | 1.0 | 43200 | > th | dose independent | rect. | 15 | 7 |
| 782 | 350.26 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 9 | 22 |
| 792 | 350.31 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 1 | 20 |
| 794 | 350.32 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 9 | 20 |
| 823 | 350.47 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 1 | 21 |
| 845 | 350.59 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 21 | 23 |
| 946 | 350.99 | temperature | 20.0 | 14400 | < th | dose independent | no | NA | NA |
| 962 | 351.04 | temperature | 20.0 | 43200 | > th | dose independent | rect. | 15 | 1 |
| 965 | 351.05 | temperature | 20.0 | 14400 | > th | dose independent | no | NA | NA |
| 969 | 351.05 | temperature | 20.0 | 43200 | < th | dose dependent | sin | 0 | NA |
| 972 | 351.06 | temperature | 20.0 | 14400 | > th | dose independent | rect. | 6 | 23 |