Os07g0187200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : FAD linked oxidase, N-terminal domain containing protein.
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Os07g0187200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : FAD linked oxidase, N-terminal domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 34.68 | 0.277 | 9.14 | -1.08 | 1.08 | 0.823 | -0.203 | 1.93 | -0.113 | 24 | 1.31 | 4307 | -- | -- |
| 36.8 | 0.283 | 9.08 | -0.653 | 1.05 | 0.599 | -0.121 | -- | 0.0268 | 0.0342 | 3.266 | 15936 | -- | -- |
| 34.79 | 0.275 | 9.14 | -1.07 | 1.09 | 0.836 | -- | 1.96 | -0.112 | 24 | 1.317 | 4286 | -- | -- |
| 35.31 | 0.277 | 9.08 | -0.545 | 1.11 | 0.583 | -- | -- | 0.0638 | 23.9 | 2.35 | 22869 | -- | -- |
| 54.91 | 0.347 | 9.1 | -0.798 | -- | 0.733 | -- | -0.343 | -0.134 | -- | 1.569 | 11878 | -- | -- |
| 43.69 | 0.31 | 9.12 | -0.863 | 1.05 | -- | -0.283 | -- | -0.162 | 23.9 | -- | -- | -- | -- |
| 44.03 | 0.311 | 9.12 | -0.852 | 1.05 | -- | -- | -- | -0.161 | 23.9 | -- | -- | -- | -- |
| 46.73 | 0.32 | 9.1 | -0.84 | -- | 0.853 | -- | -- | -0.15 | -- | 13.18 | 1720 | -- | -- |
| 35.27 | 0.277 | 9.05 | -- | 1.07 | 0.825 | -- | -- | 0.161 | 23.9 | 0.009995 | 47520 | -- | -- |
| 113.52 | 0.498 | 9.1 | -0.82 | -- | -- | -- | -- | -0.147 | -- | -- | -- | -- | -- |
| 63.15 | 0.372 | 9.1 | -- | 1.04 | -- | -- | -- | -0.0659 | 23.9 | -- | -- | -- | -- |
| 62.16 | 0.367 | 9.07 | -- | -- | 0.952 | -- | -- | -0.0096 | -- | 22.61 | 47 | -- | -- |
| 131.24 | 0.535 | 9.08 | -- | -- | -- | -- | -- | -0.0557 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 31.20 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 2 | 31.22 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 5 | 31.37 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 15 | 1 |
| 6 | 31.39 | wind | 9.0 | 43200 | > th | dose independent | rect. | 16 | 1 |
| 15 | 31.69 | wind | 9.0 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 17 | 31.72 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 14 | 2 |
| 26 | 31.89 | wind | 9.0 | 43200 | < th | dose independent | rect. | 16 | 1 |
| 29 | 31.92 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 13 | 1 |
| 30 | 31.93 | wind | 9.0 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 33 | 31.99 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 19 | 1 |
| 34 | 32.00 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 14 | 1 |
| 37 | 32.04 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 19 | 1 |
| 39 | 32.04 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 19 | 1 |
| 42 | 32.08 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 1 |
| 43 | 32.09 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 14 | 1 |
| 45 | 32.11 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 10 | 6 |
| 57 | 32.24 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 13 | 4 |
| 63 | 32.30 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 10 | 6 |
| 64 | 32.31 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 13 | 1 |
| 65 | 32.31 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 13 | 1 |
| 68 | 32.31 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 13 | 1 |
| 71 | 32.35 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 1 |
| 85 | 32.47 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 13 | 4 |
| 89 | 32.47 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 13 | 4 |
| 92 | 32.48 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 13 | 4 |
| 99 | 32.49 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 116 | 32.51 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 9 | 1 |
| 137 | 32.54 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 15 | 2 |
| 149 | 32.57 | humidity | 70.0 | 43200 | > th | dose dependent | rect. | 14 | 1 |
| 154 | 32.58 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 16 | 1 |
| 155 | 32.58 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 9 | 8 |
| 167 | 32.61 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 13 | 5 |
| 172 | 32.63 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 15 | 2 |
| 173 | 32.63 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 15 | 2 |
| 175 | 32.63 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 15 | 2 |
| 176 | 32.64 | wind | 5.0 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 196 | 32.67 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 5 | 2 |
| 217 | 32.72 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 1 | 6 |
| 218 | 32.73 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 5 | 2 |
| 224 | 32.73 | atmosphere | 1005.0 | 14400 | > th | dose dependent | rect. | 18 | 1 |
| 247 | 32.77 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 1 | 1 |
| 307 | 32.86 | atmosphere | 1005.0 | 43200 | > th | dose independent | sin | 19 | NA |
| 321 | 32.87 | atmosphere | 1005.0 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 345 | 32.90 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 349 | 32.90 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 16 | 1 |
| 375 | 32.92 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 13 | 15 |
| 376 | 32.92 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 7 | 3 |
| 380 | 32.93 | radiation | 10.0 | 43200 | > th | dose independent | rect. | 5 | 1 |
| 422 | 32.97 | wind | 5.0 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 462 | 33.00 | wind | 3.0 | 14400 | > th | dose dependent | rect. | 18 | 1 |
| 475 | 33.02 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 7 | 3 |
| 499 | 33.04 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 1 | 6 |
| 503 | 33.04 | atmosphere | 1005.0 | 14400 | > th | dose dependent | sin | 19 | NA |
| 517 | 33.06 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 13 | 7 |
| 518 | 33.06 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 24 | 8 |
| 531 | 33.07 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 13 | 7 |
| 535 | 33.07 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 3 | 3 |
| 536 | 33.07 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 13 | 7 |
| 542 | 33.08 | atmosphere | 1005.0 | 43200 | < th | dose independent | sin | 19 | NA |
| 558 | 33.09 | humidity | 90.0 | 1440 | > th | dose dependent | rect. | 6 | 1 |
| 572 | 33.10 | atmosphere | 1005.0 | 43200 | > th | dose independent | rect. | 3 | 17 |
| 639 | 33.15 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 13 | 15 |
| 720 | 33.20 | humidity | 90.0 | 14400 | < th | dose independent | rect. | 6 | 1 |
| 721 | 33.20 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 7 | 3 |
| 789 | 33.24 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 19 | 2 |
| 790 | 33.24 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 15 | 5 |
| 795 | 33.24 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 5 | 1 |
| 810 | 33.25 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 15 | 5 |
| 815 | 33.25 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 15 | 5 |
| 897 | 33.29 | atmosphere | 1005.0 | 14400 | > th | dose dependent | no | NA | NA |
| 914 | 33.30 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 949 | 33.32 | temperature | 25.0 | 14400 | > th | dose independent | rect. | 2 | 1 |
| 950 | 33.32 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 19 | 1 |
| 980 | 33.33 | atmosphere | 1005.0 | 43200 | > th | dose dependent | rect. | 23 | 1 |